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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of cell cycle arrest
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Accession:GO:0071156 term browser browse the term
Definition:Any process that modulates the rate, frequency, or extent of cell cycle arrest, the process in which the cell cycle is halted during one of the normal phases.


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regulation of cell cycle arrest term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bin1 bridging integrator 1 ISO
ISS
IEA
(PMID:10412034)
GO_REF:0000024
GO_REF:0000107
RGD
Alzheimers_University_of_Toronto
Ensembl
PMID:10412034 GO_REF:0000024, GO_REF:0000107 NCBI chr18:25,163,575...25,222,139
Ensembl chr18:25,163,561...25,222,135
JBrowse link
G Foxm1 forkhead box M1 ISO
IBA
IEA
(PMID:19696738)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:19696738, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 4:161,685,236...161,697,633
Ensembl chr 4:161,685,258...161,696,305
JBrowse link
G Mastl microtubule associated serine/threonine kinase-like ISO (PMID:23843240) RGD PMID:23843240 NCBI chr17:89,839,562...89,875,855
Ensembl chr17:89,742,140...89,876,825
JBrowse link
G Neurod1 neuronal differentiation 1 ISS
ISO
GO_REF:0000024
(MGI:5009210|PMID:9512516)
UniProt
RGD
PMID:9512516 GO_REF:0000024, MGI:5009210 NCBI chr 3:66,414,314...66,417,617
Ensembl chr 3:66,414,308...66,417,741
JBrowse link
G Sde2 SDE2 telomere maintenance homolog IEA
ISO
GO_REF:0000107
(PMID:27906959)
Ensembl
RGD
PMID:27906959 GO_REF:0000107 NCBI chr13:99,136,921...99,153,187
Ensembl chr13:99,136,871...99,153,181
JBrowse link
G Slc25a33 solute carrier family 25 member 33 ISO (PMID:17596519) RGD PMID:17596519 NCBI chr 5:166,701,463...166,726,794
Ensembl chr 5:166,701,465...166,726,794
JBrowse link
DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp2 caspase 2 ISO (PMID:21726810) RGD PMID:21726810 NCBI chr 4:71,652,358...71,670,228
Ensembl chr 4:71,652,354...71,670,239
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A ISO (PMID:15149599) RGD PMID:15149599 NCBI chr20:6,348,422...6,358,864
Ensembl chr20:6,351,458...6,358,864
JBrowse link
G Cradd CASP2 and RIPK1 domain containing adaptor with death domain ISO
IBA
(PMID:21726810)
PMID:21873635
RGD PMID:21726810, PMID:21873635 RGD:13792537 NCBI chr 7:36,395,665...36,408,588
Ensembl chr 7:36,395,665...36,408,588
JBrowse link
G Mdm2 MDM2 proto-oncogene ISO (PMID:21726810) RGD PMID:21726810 NCBI chr 7:60,719,060...60,743,618
Ensembl chr 7:60,719,066...60,743,328
JBrowse link
G Muc1 mucin 1, cell surface associated ISO (PMID:15710329) RGD PMID:15710329 NCBI chr 2:188,543,137...188,547,874
Ensembl chr 2:188,543,137...188,547,874
JBrowse link
G Pidd1 p53-induced death domain protein 1 ISO (PMID:21726810) RGD PMID:21726810 NCBI chr 1:214,418,751...214,423,959
Ensembl chr 1:214,419,240...214,423,881
JBrowse link
G Pml PML nuclear body scaffold ISO (MGI:3580934|PMID:15626733) RGD PMID:15626733 MGI:3580934 NCBI chr 8:63,002,515...63,034,310
Ensembl chr 8:63,004,870...63,034,226
JBrowse link
G Ppp2r5c protein phosphatase 2, regulatory subunit B', gamma ISO (PMID:17245430) RGD PMID:17245430 NCBI chr 6:134,804,128...134,941,912
Ensembl chr 6:134,804,141...134,939,358
JBrowse link
G Rbm38 RNA binding motif protein 38 ISO (PMID:17050675) RGD PMID:17050675 NCBI chr 3:171,037,891...171,050,500
Ensembl chr 3:171,037,957...171,050,475
JBrowse link
G Rpl26 ribosomal protein L26 ISO (PMID:16213212)
(MGI:5882892|PMID:16213212)
RGD PMID:16213212 MGI:5882892 NCBI chr10:55,492,417...55,495,547
Ensembl chr10:55,492,404...55,496,012
JBrowse link
G Sox4 SRY-box transcription factor 4 ISO (PMID:19234109) RGD PMID:19234109 NCBI chr17:37,615,022...37,619,728 JBrowse link
G Tp53 tumor protein p53 ISO (PMID:16213212)
MGI:108027 (MGI:3589512|PMID:16107883)
RGD PMID:16107883, PMID:16213212 MGI:3589512 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
negative regulation of cell cycle arrest term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calr calreticulin ISO ENSEMBL_GeneID:ENSG00000124762 (PMID:14726956) RGD PMID:14726956 NCBI chr19:25,956,771...25,961,666
Ensembl chr19:25,956,771...25,961,666
JBrowse link
G Cast calpastatin IMP RGD PMID:18809371 RGD:5683637 NCBI chr 2:1,452,111...1,561,669
Ensembl chr 2:1,452,116...1,561,464
JBrowse link
G Ccnd1 cyclin D1 ISO
ISS
(PMID:19124461)
GO_REF:0000024
RGD
UniProt
PMID:19124461 GO_REF:0000024 NCBI chr 1:218,090,750...218,100,447
Ensembl chr 1:218,090,750...218,100,325
JBrowse link
G Cdk4 cyclin-dependent kinase 4 ISO
ISS
(PMID:19124461)
GO_REF:0000024
RGD
UniProt
PMID:19124461 GO_REF:0000024 NCBI chr 7:70,345,971...70,352,689
Ensembl chr 7:70,349,863...70,352,418
JBrowse link
G Cdk9 cyclin-dependent kinase 9 ISO (PMID:20930849) RGD PMID:20930849 NCBI chr 3:11,742,269...11,747,117
Ensembl chr 3:11,742,266...11,747,113
JBrowse link
G Chek2 checkpoint kinase 2 IGI RGD PMID:10435585 RGD:633752 NCBI chr12:51,845,574...51,878,098
Ensembl chr12:51,845,796...51,877,624
JBrowse link
G Fgf10 fibroblast growth factor 10 ISO (PMID:17188682) RGD PMID:17188682 NCBI chr 2:51,673,480...51,747,533
Ensembl chr 2:51,672,722...51,750,369
JBrowse link
G Foxe3 forkhead box E3 ISO
ISS
(PMID:22527307) RGD PMID:22527307, PMID:22527307 RGD:10047255 NCBI chr 5:133,724,796...133,725,656
Ensembl chr 5:133,724,796...133,725,656
JBrowse link
G Fzd9 frizzled class receptor 9 ISO
ISS
(PMID:27509850)
GO_REF:0000024
RGD
UniProt
PMID:27509850 GO_REF:0000024 NCBI chr12:24,473,981...24,476,295
Ensembl chr12:24,473,981...24,476,295
JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 IEA
ISO
ISS
GO_REF:0000107
(MGI:5516154|PMID:23871778)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23871778 GO_REF:0000024, GO_REF:0000107, MGI:5516154 NCBI chr12:17,309,122...17,315,267
Ensembl chr12:17,309,834...17,311,112
JBrowse link
G Hmgn5 high mobility group nucleosome binding domain 5 ISO (PMID:20531280) RGD PMID:20531280 NCBI chr  X:80,134,557...80,142,902
Ensembl chr  X:80,134,557...80,142,902
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISO
ISS
(PMID:22843495)
GO_REF:0000024
RGD
UniProt
PMID:22843495 GO_REF:0000024 NCBI chr 9:17,817,791...17,823,163
Ensembl chr 9:17,817,721...17,823,243
JBrowse link
G Mdm2 MDM2 proto-oncogene ISO (PMID:9529249) RGD PMID:9529249 NCBI chr 7:60,719,060...60,743,618
Ensembl chr 7:60,719,066...60,743,328
JBrowse link
G Mdm4 MDM4 regulator of p53 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:49,786,776...49,828,780
Ensembl chr13:49,792,794...49,828,720
JBrowse link
G Mif macrophage migration inhibitory factor ISO (PMID:10562313) RGD PMID:10562313 NCBI chr20:13,715,219...13,732,980
Ensembl chr20:13,732,198...13,732,859
JBrowse link
G Mlxipl MLX interacting protein-like ISO (PMID:19995986) RGD PMID:19995986 NCBI chr12:24,590,645...24,619,639 JBrowse link
G Nupr2 nuclear protein 2, transcriptional regulator ISO (PMID:25899918) RGD PMID:25899918 NCBI chr12:30,300,936...30,304,041
Ensembl chr12:30,303,725...30,304,036
JBrowse link
G Rassf1 Ras association domain family member 1 ISO (PMID:18566590) RGD PMID:18566590 NCBI chr 8:116,307,149...116,318,289
Ensembl chr 8:116,307,141...116,318,289
JBrowse link
G Rpl23 ribosomal protein L23 ISO (PMID:19160485) RGD PMID:19160485 NCBI chr10:85,721,398...85,725,359
Ensembl chr10:85,721,394...85,725,429
JBrowse link
G Setmar SET domain and mariner transposase fusion gene ISO (PMID:19390626) RGD PMID:19390626 NCBI chr 4:140,092,346...140,104,495
Ensembl chr 4:140,092,352...140,105,316
JBrowse link
G Tfap4 transcription factor AP-4 ISO (PMID:18818310) RGD PMID:18818310 NCBI chr10:11,204,616...11,222,975
Ensembl chr10:11,206,226...11,223,370
JBrowse link
positive regulation of cell cycle arrest term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca1 BRCA1, DNA repair associated ISO
IBA
IEA
(PMID:21102443)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:21102443, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr10:89,394,821...89,455,093
Ensembl chr10:89,394,803...89,454,681
JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 ISO (MGI:5524211|PMID:21566658) RGD PMID:21566658 MGI:5524211 NCBI chr10:67,862,054...67,863,255
Ensembl chr10:67,862,054...67,863,255
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A ISO (PMID:9529249) RGD PMID:9529249 NCBI chr 5:107,823,323...107,832,405
Ensembl chr 5:107,823,330...107,841,175
JBrowse link
G Crlf3 cytokine receptor-like factor 3 ISO (PMID:19427400) RGD PMID:19427400 NCBI chr10:67,383,664...67,401,836
Ensembl chr10:67,383,900...67,401,836
JBrowse link
G Dab2ip DAB2 interacting protein IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:19903888)
Ensembl
UniProt
RGD
PMID:19903888 GO_REF:0000024, GO_REF:0000107 NCBI chr 3:14,889,263...15,060,286
Ensembl chr 3:14,889,510...15,060,286
JBrowse link
G Fap fibroblast activation protein, alpha ISO (MGI:3047166|PMID:15133496) RGD PMID:15133496 MGI:3047166 NCBI chr 3:48,467,781...48,536,242
Ensembl chr 3:48,467,781...48,536,235
JBrowse link
G Foxo4 forkhead box O4 ISO (PMID:15905404) RGD PMID:15905404 NCBI chr  X:71,155,284...71,162,158
Ensembl chr  X:71,155,601...71,162,158
JBrowse link
G Gata6 GATA binding protein 6 IEA
ISO
GO_REF:0000107
(PMID:9593712)
Ensembl
RGD
PMID:9593712 GO_REF:0000107 NCBI chr18:2,415,821...2,447,087
Ensembl chr18:2,416,552...2,446,338
JBrowse link
G Hmga2 high mobility group AT-hook 2 ISO
ISS
(PMID:16061642)
GO_REF:0000024
RGD
UniProt
PMID:16061642 GO_REF:0000024 NCBI chr 7:65,159,944...65,275,408
Ensembl chr 7:65,159,944...65,275,408
JBrowse link
G Id2 inhibitor of DNA binding 2 ISS
ISO
GO_REF:0000024
(MGI:4412240|PMID:18474814)
UniProt
RGD
PMID:18474814 GO_REF:0000024, MGI:4412240 NCBI chr 6:44,360,077...44,361,908
Ensembl chr 6:44,348,501...44,363,915
JBrowse link
G Insm1 INSM transcriptional repressor 1 ISO (PMID:19124461) RGD PMID:19124461 NCBI chr 3:140,427,961...140,430,467 JBrowse link
G Med25 mediator complex subunit 25 ISO (PMID:17641689) RGD PMID:17641689 NCBI chr 1:100,872,240...100,887,864
Ensembl chr 1:100,874,976...100,887,853
JBrowse link
G Mybbp1a MYB binding protein 1a ISO (PMID:21471221) RGD PMID:21471221 NCBI chr10:59,000,400...59,010,794
Ensembl chr10:59,000,397...59,010,903
JBrowse link
G Myog myogenin ISS
ISO
GO_REF:0000024
(MGI:5526919|PMID:22847234)
UniProt
RGD
PMID:22847234 GO_REF:0000024, MGI:5526919 NCBI chr13:51,126,459...51,129,048
Ensembl chr13:51,126,459...51,129,048
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (PMID:16311606) RGD PMID:16311606 NCBI chr14:6,602,004...6,645,257
Ensembl chr14:6,602,004...6,645,257
JBrowse link
G Pou4f1 POU class 4 homeobox 1 ISS
ISO
IEA
GO_REF:0000024
UniProtKB:O15350|UniProtKB:P04637 (MGI:5688842|PMID:18421303), (MGI:5825431|PMID:17145718), (MGI:6355477|PMID:10329733), (MGI:6467921|PMID:12433990), (MGI:6467925|PMID:12203124)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:10329733, PMID:12203124, PMID:12433990, PMID:17145718, PMID:18421303 GO_REF:0000024, GO_REF:0000107, MGI:5688842, MGI:5825431, MGI:6355477, MGI:6467921, MGI:6467925 NCBI chr15:88,618,255...88,622,712
Ensembl chr15:88,620,470...88,622,413
JBrowse link
G Ppp2r5b protein phosphatase 2, regulatory subunit B', beta IDA PMID:19029245 MGI PMID:19029245 RGD:8553977 NCBI chr 1:221,597,294...221,605,467
Ensembl chr 1:221,597,296...221,605,400
JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha IEA
ISO
GO_REF:0000107
(MGI:5306575|PMID:19223768)
Ensembl
RGD
PMID:19223768 GO_REF:0000107, MGI:5306575 NCBI chr19:25,095,089...25,118,869
Ensembl chr19:25,095,089...25,118,860
JBrowse link
G Rgcc regulator of cell cycle ISO (PMID:17146433) RGD PMID:17146433 NCBI chr15:61,551,861...61,564,695
Ensembl chr15:61,551,861...61,564,695
JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 ISO (PMID:27556504) RGD PMID:27556504 NCBI chr17:42,324,594...42,549,907
Ensembl chr17:42,324,594...42,422,053
JBrowse link
G Rnf112 ring finger protein 112 IEA
ISO
GO_REF:0000107
(MGI:5524211|PMID:21566658)
Ensembl
RGD
PMID:21566658 GO_REF:0000107, MGI:5524211 NCBI chr10:47,719,034...47,726,050
Ensembl chr10:47,719,014...47,725,172
JBrowse link
G Rpl23 ribosomal protein L23 ISO (PMID:15314173) RGD PMID:15314173 NCBI chr10:85,721,398...85,725,359
Ensembl chr10:85,721,394...85,725,429
JBrowse link
G Rrp8 ribosomal RNA processing 8 ISO (PMID:21471221) RGD PMID:21471221 NCBI chr 1:170,574,670...170,578,693
Ensembl chr 1:170,574,349...170,579,616
JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO (MGI:3820325|PMID:19056892) RGD PMID:19056892 MGI:3820325 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Tp53 tumor protein p53 ISO UniProtKB:P17208 (PMID:10329733), (PMID:12203124), (PMID:12433990), (PMID:15314173), (PMID:21471221) RGD PMID:10329733, PMID:12203124, PMID:12433990, PMID:15314173, PMID:21471221 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Tp73 tumor protein p73 ISO (PMID:18421303) RGD PMID:18421303 NCBI chr 5:171,355,876...171,415,354
Ensembl chr 5:171,355,876...171,415,354
JBrowse link
G Uhrf2 ubiquitin like with PHD and ring finger domains 2 ISO (PMID:15178429) RGD PMID:15178429 NCBI chr 1:248,228,496...248,291,984
Ensembl chr 1:248,228,496...248,291,978
JBrowse link
G Zbtb17 zinc finger and BTB domain containing 17 ISO (PMID:19160485) RGD PMID:19160485 NCBI chr 5:159,993,799...160,014,899
Ensembl chr 5:159,993,799...160,014,895
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    cellular process 18792
      cell cycle process 1210
        regulation of cell cycle process 623
          regulation of cell cycle arrest 64
            negative regulation of cell cycle arrest 21
            positive regulation of cell cycle arrest + 39
            regulation of mitotic G1 cell cycle arrest in response to nitrogen starvation + 0
Path 2
Term Annotations click to browse term
  biological_process 20020
    biological regulation 13769
      regulation of biological process 13071
        regulation of cellular process 12556
          regulation of cell cycle 1021
            negative regulation of cell cycle 443
              cell cycle arrest 142
                regulation of cell cycle arrest 64
                  negative regulation of cell cycle arrest 21
                  positive regulation of cell cycle arrest + 39
                  regulation of mitotic G1 cell cycle arrest in response to nitrogen starvation + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.