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ONTOLOGY REPORT - ANNOTATIONS


Term:spindle assembly checkpoint
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Accession:GO:0071173 term browser browse the term
Definition:A cell cycle checkpoint that delays the metaphase/anaphase transition until the spindle is correctly assembled and chromosomes are attached to the spindle.
Comment:Note that this term should not be used for direct manual annotation as it should always be possible to specify the type of spindle assembly checkpoint (mitotic or meiotic).
Synonyms:broad_synonym: SAC


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deactivation of mitotic spindle assembly checkpoint term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdt1 chromatin licensing and DNA replication factor 1 ISO (PMID:22581055) CAFA PMID:22581055 NCBI chrNW_004955541:2,683,030...2,687,883
Ensembl chrNW_004955541:2,683,408...2,687,102
JBrowse link
meiotic spindle assembly checkpoint term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ttk TTK protein kinase ISO (MGI:MGI:5049806|PMID:21558374) MGI PMID:21558374 MGI:MGI:5049806 NCBI chrNW_004955502:7,824,194...7,866,879 JBrowse link
mitotic spindle assembly checkpoint term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway ISO (PMID:17227893) MGI PMID:17227893 NCBI chrNW_004955418:2,567,804...2,675,062
Ensembl chrNW_004955418:2,566,975...2,674,832
JBrowse link
G Atm ATM serine/threonine kinase ISO (PMID:11943150) UniProtKB PMID:11943150 NCBI chrNW_004955412:10,422,753...10,531,406
Ensembl chrNW_004955412:10,426,135...10,530,545
JBrowse link
G Cenpe centromere protein E ISO (MGI:MGI:2673075|PMID:12925705) UniProtKB PMID:12925705 MGI:MGI:2673075 NCBI chrNW_004955496:5,468,759...5,514,915
Ensembl chrNW_004955496:5,469,239...5,513,574
JBrowse link
G Ik IK cytokine ISO (PMID:22351768) UniProtKB PMID:22351768 NCBI chrNW_004955418:39,695...52,862
Ensembl chrNW_004955418:39,695...52,862
JBrowse link
G Klhl22 kelch like family member 22 ISO (PMID:23455478) UniProtKB PMID:23455478 NCBI chrNW_004955442:19,010,971...19,051,300 JBrowse link
G Mad1l1 mitotic arrest deficient 1 like 1 ISO (PMID:18981471) UniProt PMID:18981471 NCBI chrNW_004955460:9,340,728...9,672,478
Ensembl chrNW_004955460:9,340,681...9,672,134
JBrowse link
G Mad2l1 mitotic arrest deficient 2 like 1 ISO (PMID:18981471)
(MGI:MGI:1930685|PMID:11201745)
UniProt
MGI
PMID:11201745, PMID:18981471 MGI:MGI:1930685 NCBI chrNW_004955428:20,421,718...20,443,394
Ensembl chrNW_004955428:20,421,723...20,430,307
JBrowse link
G Plk1 polo like kinase 1 ISO (PMID:23455478) UniProtKB PMID:23455478 NCBI chrNW_004955493:2,206,353...2,217,231
Ensembl chrNW_004955493:2,206,353...2,217,231
JBrowse link
G Psmg2 proteasome assembly chaperone 2 ISO (MGI:MGI:2388532|PMID:12147697) MGI PMID:12147697 MGI:MGI:2388532 NCBI chrNW_004955402:857,228...870,940 JBrowse link
G Tex14 testis expressed 14, intercellular bridge forming factor ISO (MGI:MGI:5318128|PMID:22405274) UniProtKB PMID:22405274 MGI:MGI:5318128 NCBI chrNW_004955451:4,206,114...4,296,969
Ensembl chrNW_004955451:4,179,591...4,297,024
JBrowse link
G Tpr translocated promoter region, nuclear basket protein ISO (PMID:20133940) UniProt PMID:20133940 NCBI chrNW_004955406:24,742,525...24,805,989
Ensembl chrNW_004955406:24,742,525...24,805,989
JBrowse link
G Trip13 thyroid hormone receptor interactor 13 ISO (PMID:28553959) UniProtKB PMID:28553959 NCBI chrNW_004955504:434,187...452,636
Ensembl chrNW_004955504:434,159...452,671
JBrowse link
G Ttk TTK protein kinase ISO (MGI:MGI:5608719|PMID:25197064) MGI PMID:25197064 MGI:MGI:5608719 NCBI chrNW_004955502:7,824,194...7,866,879 JBrowse link
G Znf207 zinc finger protein 207 ISO (PMID:24462186), (PMID:24462187) UniProtKB PMID:24462186, PMID:24462187 NCBI chrNW_004955481:7,307,520...7,325,591
Ensembl chrNW_004955481:7,307,521...7,328,198
JBrowse link
positive regulation of mitotic cell cycle spindle assembly checkpoint term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dync1li1 dynein cytoplasmic 1 light intermediate chain 1 ISO (PMID:19229290) UniProtKB PMID:19229290 NCBI chrNW_004955620:46,535...82,595
Ensembl chrNW_004955620:46,556...82,595
JBrowse link
G Gen1 GEN1 Holliday junction 5' flap endonuclease ISO (PMID:23108668) UniProtKB PMID:23108668 NCBI chrNW_004955469:552,850...590,792
Ensembl chrNW_004955469:552,677...592,137
JBrowse link
G Mad2l1 mitotic arrest deficient 2 like 1 ISO (MGI:MGI:4839685|PMID:20870947)
(PMID:20870947)
UniProtKB PMID:20870947 MGI:MGI:4839685 NCBI chrNW_004955428:20,421,718...20,443,394
Ensembl chrNW_004955428:20,421,723...20,430,307
JBrowse link
G Ndc80 NDC80 kinetochore complex component ISO (PMID:25743205) UniProtKB PMID:25743205 NCBI chrNW_004955402:7,692,009...7,728,876
Ensembl chrNW_004955402:7,691,937...7,729,690
JBrowse link
G Pcid2 PCI domain containing 2 ISO (MGI:MGI:4839685|PMID:20870947)
(PMID:20870947)
UniProtKB PMID:20870947 MGI:MGI:4839685 NCBI chrNW_004955404:618,092...639,424
Ensembl chrNW_004955404:618,092...639,704
JBrowse link
G Tpr translocated promoter region, nuclear basket protein ISO (PMID:18981471), (PMID:19273613) UniProt PMID:18981471, PMID:19273613 NCBI chrNW_004955406:24,742,525...24,805,989
Ensembl chrNW_004955406:24,742,525...24,805,989
JBrowse link
G Xrcc3 X-ray repair cross complementing 3 ISO (PMID:23108668) UniProtKB PMID:23108668 NCBI chrNW_004955538:2,499,297...2,511,898
Ensembl chrNW_004955538:2,501,607...2,509,778
JBrowse link
regulation of mitotic cell cycle spindle assembly checkpoint term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anapc15 anaphase promoting complex subunit 15 ISO (PMID:21926987) UniProtKB PMID:21926987 NCBI chrNW_004955414:19,218,727...19,222,138
Ensembl chrNW_004955414:19,218,727...19,222,138
JBrowse link
G Ccnb1 cyclin B1 ISO (PMID:18195732) BHF-UCL PMID:18195732 NCBI chrNW_004955446:140,661...149,500
Ensembl chrNW_004955446:140,093...149,500
JBrowse link
G Cdk5rap2 CDK5 regulatory subunit associated protein 2 ISO (PMID:19282672) UniProtKB PMID:19282672 NCBI chrNW_004955419:7,412,177...7,606,883
Ensembl chrNW_004955419:7,412,331...7,610,353
JBrowse link
G Lcmt1 leucine carboxyl methyltransferase 1 ISO (PMID:17724024) MGI PMID:17724024 NCBI chrNW_004955493:3,440,832...3,499,658
Ensembl chrNW_004955493:3,431,578...3,502,066
JBrowse link
G Usp44 ubiquitin specific peptidase 44 ISO (MGI:MGI:5448515|PMID:21853124) UniProtKB PMID:21853124 MGI:MGI:5448515 NCBI chrNW_004955405:31,977,045...32,006,733
Ensembl chrNW_004955405:31,977,602...32,006,810
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11889
    cellular process 11094
      cell cycle checkpoint 128
        spindle checkpoint 25
          spindle assembly checkpoint 25
            detection of stimulus involved in spindle assembly checkpoint + 0
            meiotic spindle assembly checkpoint + 1
            mitotic spindle assembly checkpoint + 25
            signal transduction involved in spindle assembly checkpoint + 0
Path 2
Term Annotations click to browse term
  biological_process 11889
    biological regulation 8722
      regulation of biological process 8267
        regulation of cellular process 7843
          negative regulation of cellular process 4219
            negative regulation of cell cycle 368
              cell cycle checkpoint 128
                spindle checkpoint 25
                  spindle assembly checkpoint 25
                    detection of stimulus involved in spindle assembly checkpoint + 0
                    meiotic spindle assembly checkpoint + 1
                    mitotic spindle assembly checkpoint + 25
                    signal transduction involved in spindle assembly checkpoint + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.