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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to inorganic substance
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Accession:GO:0071241 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an inorganic substance stimulus.


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cellular response to inorganic substance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy10 adenylate cyclase 10 ISO (PMID:12609998) UniProtKB PMID:12609998 NCBI chrNW_004936481:18,274,158...18,330,136 JBrowse link
G Aqp1 aquaporin 1 (Colton blood group) ISO (PMID:14561230) UniProtKB PMID:14561230 NCBI chrNW_004936478:7,146,997...7,160,369 JBrowse link
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 ISO PMID:1849823 UniProt PMID:1849823 RGD:8553426 NCBI chrNW_004936671:780,173...827,628 JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase ISO asbestos RGD PMID:12839939 RGD:2317528 NCBI chrNW_004936589:2,280,803...2,390,179 JBrowse link
G Ncam1 neural cell adhesion molecule 1 ISO RGD PMID:17537562 RGD:2326012 NCBI chrNW_004936612:1,262,557...1,556,281 JBrowse link
G Rpl5 ribosomal protein L5 ISO sodium fluoride RGD PMID:12930674 RGD:2316858 NCBI chrNW_004936537:6,341,961...6,344,831 JBrowse link
cell motility in response to calcium ion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101966632 sperm-associated antigen 16 protein ISO (MGI:MGI:4452319|PMID:20042536) MGI PMID:20042536 MGI:MGI:4452319 NCBI chrNW_004936586:3,264,953...3,407,823 JBrowse link
cellular response to aluminum ion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Becn1 beclin 1 ISO RGD PMID:22138567 RGD:6483058 NCBI chrNW_004936490:17,518,100...17,531,126 JBrowse link
cellular response to azide term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aoc1 amine oxidase copper containing 1 ISO (PMID:16846222) UniProtKB PMID:16846222 NCBI chrNW_004936527:6,309,210...6,312,869 JBrowse link
cellular response to cadmium ion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 ISO (PMID:26514923) CAFA PMID:26514923 NCBI chrNW_004936621:620,163...639,115 JBrowse link
G Atp7a ATPase copper transporting alpha ISO RGD PMID:17584760 RGD:8655656 NCBI chrNW_004936683:2,874,022...2,936,214 JBrowse link
G Chuk component of inhibitor of nuclear factor kappa B kinase complex ISO (PMID:26514923) CAFA PMID:26514923 NCBI chrNW_004936636:33,933...78,990 JBrowse link
G Daxx death domain associated protein ISO (PMID:15016915) UniProtKB PMID:15016915 NCBI chrNW_004936476:25,546,091...25,550,390 JBrowse link
G Egfr epidermal growth factor receptor ISO (PMID:26514923) CAFA PMID:26514923 NCBI chrNW_004936678:365,005...560,546 JBrowse link
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 ISO RGD PMID:24361405 RGD:9685430 NCBI chrNW_004936470:26,994,549...27,099,758 JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit ISO (PMID:26514923) CAFA PMID:26514923 NCBI chrNW_004936488:4,384,710...4,388,118 JBrowse link
G Gsn gelsolin ISO RGD PMID:16280379 RGD:1599859 NCBI chrNW_004936487:9,749,755...9,802,787 JBrowse link
G Hmox1 heme oxygenase 1 ISO (MGI:MGI:3607883|PMID:16183037) MGI PMID:16183037 MGI:MGI:3607883 NCBI chrNW_004936492:5,042,353...5,049,216 JBrowse link
G Hsf1 heat shock transcription factor 1 ISO (PMID:10359787), (PMID:11514557), (PMID:15016915), (PMID:25963659) UniProtKB PMID:10359787, PMID:11514557, PMID:15016915, PMID:25963659 NCBI chrNW_004936470:7,927,734...7,950,805 JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:9736451 RGD:10059378 NCBI chrNW_004936542:7,577,192...7,581,598 JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO (PMID:26514923) CAFA PMID:26514923 NCBI chrNW_004936522:3,034,364...3,037,632 JBrowse link
G LOC101966992 cytochrome b-245 heavy chain ISO RGD PMID:21195169 RGD:11040689 NCBI chrNW_004936502:4,631,750...4,676,686 JBrowse link
G LOC101969421 cytochrome P450 1A2 ISO (MGI:MGI:3607883|PMID:16183037) MGI PMID:16183037 MGI:MGI:3607883 NCBI chrNW_004936471:33,704,616...33,709,455 JBrowse link
G LOC101975820 cholesterol side-chain cleavage enzyme, mitochondrial ISO RGD PMID:17719163 RGD:4835171 NCBI chrNW_004936471:33,367,810...33,380,764 JBrowse link
G Mapk1 mitogen-activated protein kinase 1 ISO (PMID:26514923) CAFA PMID:26514923 NCBI chrNW_004936619:1,889,841...1,932,646 JBrowse link
G Mapk3 mitogen-activated protein kinase 3 ISO (PMID:26514923) CAFA PMID:26514923 NCBI chrNW_004936501:12,342,670...12,390,650 JBrowse link
G Mapk8 mitogen-activated protein kinase 8 ISO (PMID:26514923) CAFA PMID:26514923 NCBI chrNW_004936728:1,775,746...1,893,895 JBrowse link
G Mapk9 mitogen-activated protein kinase 9 ISO (PMID:26514923) CAFA PMID:26514923 NCBI chrNW_004936739:551,678...602,027 JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO (PMID:26514923) CAFA PMID:26514923 NCBI chrNW_004936514:7,038,240...7,045,873 JBrowse link
G Mt3 metallothionein 3 ISO (PMID:16387743) UniProtKB PMID:16387743 NCBI chrNW_004936475:8,864,512...8,866,516 JBrowse link
G Ncf1 neutrophil cytosolic factor 1 ISO (PMID:26514923) CAFA PMID:26514923 NCBI chrNW_004936543:3,617,369...3,630,990 JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase ISO RGD PMID:12499121 RGD:2317151 NCBI chrNW_004936602:3,411,106...3,418,826 JBrowse link
G Sod1 superoxide dismutase 1 ISO RGD PMID:17584760 RGD:8655656 NCBI chrNW_004936500:10,345,154...10,352,873 JBrowse link
G Star steroidogenic acute regulatory protein ISO RGD PMID:17719163 RGD:4835171 NCBI chrNW_004936710:1,523,289...1,530,181 JBrowse link
G Sumo1 small ubiquitin like modifier 1 ISO (PMID:11514557) UniProtKB PMID:11514557 NCBI chrNW_004936726:1,402,977...1,413,974 JBrowse link
G Ube2d3 ubiquitin conjugating enzyme E2 D3 ISO RGD PMID:21467746 RGD:13830870 NCBI chrNW_004936520:555,878...588,052 JBrowse link
G Ube2d4 ubiquitin conjugating enzyme E2 D4 (putative) ISO RGD PMID:21467746 RGD:13830870 NCBI chrNW_004936478:18,981,457...19,003,924 JBrowse link
cellular response to calcium ion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer1 alkaline ceramidase 1 ISO (PMID:17713573) BHF-UCL PMID:17713573 NCBI chrNW_004936588:3,688,244...3,705,831 JBrowse link
G Adcy8 adenylate cyclase 8 ISO PMID:20410303
PMID:19158400
UniProt
RGD
PMID:19158400, PMID:19305019, PMID:20410303 RGD:13800545, RGD:7241269, RGD:7242424 NCBI chrNW_004936470:17,831,644...18,047,868 JBrowse link
G Add1 adducin 1 ISO (PMID:25978380)
(MGI:MGI:5796260|PMID:25978380)
CAFA PMID:25978380 MGI:MGI:5796260 NCBI chrNW_004936477:20,695,109...20,766,053 JBrowse link
G Adgrv1 adhesion G protein-coupled receptor V1 ISO (MGI:MGI:5523726|PMID:24191038) MGI PMID:24191038 MGI:MGI:5523726 NCBI chrNW_004936469:8,653,031...9,209,840 JBrowse link
G Alox15 arachidonate 15-lipoxygenase ISO (PMID:17052953) UniProtKB PMID:17052953 NCBI chrNW_004936677:3,232,183...3,241,307 JBrowse link
G Alox5ap arachidonate 5-lipoxygenase activating protein ISO (PMID:2300173) UniProtKB PMID:2300173 NCBI chrNW_004936472:25,477,094...25,502,823 JBrowse link
G Asph aspartate beta-hydroxylase ISO (PMID:21062895) UniProtKB PMID:21062895 NCBI chrNW_004936496:11,604,992...11,815,680 JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase ISO (PMID:18567582) BHF-UCL PMID:18567582 NCBI chrNW_004936592:4,728,371...4,833,830 JBrowse link
G Cacybp calcyclin binding protein ISO RGD PMID:11927578 RGD:625428 NCBI chrNW_004936481:13,198,744...13,203,518 JBrowse link
G Capn3 calpain 3 ISO (MGI:MGI:4839427|PMID:20460380) UniProtKB PMID:20460380 MGI:MGI:4839427 NCBI chrNW_004936471:5,667,839...5,711,822 JBrowse link
G Carf calcium responsive transcription factor ISO (PMID:11832226), (PMID:22174809) UniProtKB PMID:11832226, PMID:22174809 NCBI chrNW_004936726:1,958,561...2,010,972 JBrowse link
G Chp2 calcineurin like EF-hand protein 2 ISO (PMID:18815128) UniProtKB PMID:18815128 NCBI chrNW_004936501:8,374,323...8,377,195 JBrowse link
G Clic4 chloride intracellular channel 4 ISO (PMID:17636002) UniProtKB PMID:17636002 NCBI chrNW_004936474:9,664,872...9,711,036 JBrowse link
G Cpne2 copine 2 ISO (MGI:MGI:5634886|PMID:21087455) UniProtKB PMID:21087455 MGI:MGI:5634886 NCBI chrNW_004936475:9,237,845...9,262,588 JBrowse link
G Cpne3 copine 3 ISO (PMID:20010870), (PMID:21087455) UniProtKB PMID:20010870, PMID:21087455 NCBI chrNW_004936544:1,094,257...1,147,964 JBrowse link
G Cpne6 copine 6 ISO (MGI:MGI:5634886|PMID:21087455) UniProtKB PMID:21087455 MGI:MGI:5634886 NCBI chrNW_004936722:454,818...462,324 JBrowse link
G Cpne7 copine 7 ISO (PMID:21087455) UniProtKB PMID:21087455 NCBI chrNW_004936641:413,331...426,514 JBrowse link
G Crhbp corticotropin releasing hormone binding protein ISO (MGI:MGI:5315350|PMID:15976007) UniProtKB PMID:15976007 MGI:MGI:5315350 NCBI chrNW_004936549:64,866...78,272 JBrowse link
G Crp C-reactive protein ISO RGD PMID:22090504 RGD:6904210 NCBI chrNW_004936740:885,855...888,854 JBrowse link
G Dmtn dematin actin binding protein ISO (MGI:MGI:5465511|PMID:23060452) UniProtKB PMID:23060452 MGI:MGI:5465511 NCBI chrNW_004936555:5,884,746...5,911,171 JBrowse link
G Dpep1 dipeptidase 1 ISO (PMID:11139399), (PMID:17615681) UniProt PMID:11139399, PMID:17615681 NCBI chrNW_004936641:379,112...384,711 JBrowse link
G Ect2 epithelial cell transforming 2 ISO (PMID:15254234) UniProtKB PMID:15254234 NCBI chrNW_004936593:6,028...29,911 JBrowse link
G Edn1 endothelin 1 ISO RGD PMID:1852000 RGD:8662267 NCBI chrNW_004936534:885,489...892,292 JBrowse link
G Eef2k eukaryotic elongation factor 2 kinase ISO RGD PMID:19188248 RGD:10401231 NCBI chrNW_004936501:7,160,134...7,205,231 JBrowse link
G Endog endonuclease G ISO RGD PMID:12582256 RGD:9685368 NCBI chrNW_004936487:16,282,115...16,285,486 JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit ISO (MGI:MGI:3844178|PMID:19365557) MGI PMID:19365557 MGI:MGI:3844178 NCBI chrNW_004936488:4,384,710...4,388,118 JBrowse link
G Fosb FosB proto-oncogene, AP-1 transcription factor subunit ISO (MGI:MGI:3846264|PMID:19303854) MGI PMID:19303854 MGI:MGI:3846264 NCBI chrNW_004936706:1,900,954...1,907,567 JBrowse link
G Fus FUS RNA binding protein ISO RGD PMID:19103256 RGD:9685716 NCBI chrNW_004936501:13,529,732...13,541,102 JBrowse link
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 ISO (PMID:2760042)
PMID:1849823
UniProtKB
UniProt
PMID:1849823, PMID:2760042 RGD:8553426 NCBI chrNW_004936671:780,173...827,628 JBrowse link
G Hpca hippocalcin ISO (PMID:28398555) UniProtKB PMID:28398555 NCBI chrNW_004936474:15,786,171...15,794,830 JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 ISO RGD PMID:9058202 RGD:11354978 NCBI chrNW_004936487:13,348,465...13,352,717 JBrowse link
G Inhbb inhibin subunit beta B ISO RGD PMID:1634019 RGD:9743923 NCBI chrNW_004936469:50,186,036...50,191,455 JBrowse link
G Iqgap1 IQ motif containing GTPase activating protein 1 ISO (PMID:18567582) BHF-UCL PMID:18567582 NCBI chrNW_004936483:16,489,127...16,594,712 JBrowse link
G Itpkb inositol-trisphosphate 3-kinase B ISO (PMID:1654894) UniProtKB PMID:1654894 NCBI chrNW_004936526:3,378,046...3,477,177 JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO (MGI:MGI:3846264|PMID:19303854) MGI PMID:19303854 MGI:MGI:3846264 NCBI chrNW_004936522:3,034,364...3,037,632 JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit ISO (MGI:MGI:3846264|PMID:19303854) MGI PMID:19303854 MGI:MGI:3846264 NCBI chrNW_004936659:1,890,786...1,892,619 JBrowse link
G Kcnh1 potassium voltage-gated channel subfamily H member 1 ISO (PMID:27005320), (PMID:27325704)
PMID:27516594
RGD
UniProtKB
UniProt
PMID:8790430, PMID:27005320, PMID:27325704, PMID:27516594 RGD:11533419, RGD:9693720 NCBI chrNW_004936557:2,133,596...2,493,170 JBrowse link
G Krt10 keratin 10 ISO (MGI:MGI:3846264|PMID:19303854) MGI PMID:19303854 MGI:MGI:3846264 NCBI chrNW_004936490:15,783,636...15,788,605 JBrowse link
G Lgmn legumain ISO (PMID:21237226) ARUK-UCL PMID:21237226 NCBI chrNW_004936733:772,764...792,792 JBrowse link
G Mcoln1 mucolipin 1 ISO (MGI:MGI:6103412|PMID:29019981) UniProtKB PMID:29019981 MGI:MGI:6103412 NCBI chrNW_004936588:4,600,344...4,608,793 JBrowse link
G Mef2a myocyte enhancer factor 2A ISO (PMID:16484498)
PMID:10521511
UniProtKB
UniProt
PMID:10521511, PMID:16484498 RGD:8553671 NCBI chrNW_004936483:3,837,891...3,982,334 JBrowse link
G Mef2c myocyte enhancer factor 2C ISO (MGI:MGI:5284792|PMID:15998798) UniProtKB PMID:15998798 MGI:MGI:5284792 NCBI chrNW_004936469:7,060,480...7,225,497 JBrowse link
G Mylk myosin light chain kinase ISO (MGI:MGI:3805620|PMID:18524939) MGI PMID:18524939 MGI:MGI:3805620 NCBI chrNW_004936725:1,418,930...1,594,697 JBrowse link
G Ncstn nicastrin ISO (MGI:MGI:5575797|PMID:24889619) MGI PMID:24889619 MGI:MGI:5575797 NCBI chrNW_004936740:285,789...301,918 JBrowse link
G Neurod2 neuronal differentiation 2 ISO (MGI:MGI:3621523|PMID:16504944) UniProtKB PMID:16504944 MGI:MGI:3621523 NCBI chrNW_004936490:14,801,636...14,803,437 JBrowse link
G Nfatc3 nuclear factor of activated T cells 3 ISO (MGI:MGI:5490841|PMID:23219532) MGI PMID:23219532 MGI:MGI:5490841 NCBI chrNW_004936475:18,462,424...18,557,832 JBrowse link
G Nlgn1 neuroligin 1 ISO PMID:14522992 ARUK-UCL PMID:14522992 RGD:13210536 NCBI chrNW_004936703:951,935...1,415,991 JBrowse link
G Nrxn1 neurexin 1 ISO PMID:14522992 ARUK-UCL PMID:14522992 RGD:13210536 NCBI chrNW_004936508:1,889,640...2,954,039 JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (MGI:MGI:5883145|PMID:27760766) UniProtKB PMID:27760766 MGI:MGI:5883145 NCBI chrNW_004936905:76,781...128,995 JBrowse link
G Ppif peptidylprolyl isomerase F ISO (MGI:MGI:3575990|PMID:15800627), (MGI:MGI:3576003|PMID:15800626), (MGI:MGI:3603054|PMID:16103352) UniProtKB PMID:15800626, PMID:15800627, PMID:16103352 MGI:MGI:3575990, MGI:MGI:3576003, MGI:MGI:3603054 NCBI chrNW_004936521:404,574...411,381 JBrowse link
G Ppp2ca protein phosphatase 2 catalytic subunit alpha ISO RGD PMID:18322138 RGD:8693423 NCBI chrNW_004936647:1,031,118...1,055,961 JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 ISO PMID:25788287
(MGI:MGI:6148484|PMID:25788287)
ARUK-UCL PMID:25788287 MGI:MGI:6148484, RGD:13514090 NCBI chrNW_004936518:1,817,051...1,843,376 JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 ISO PMID:25788287
(MGI:MGI:6148484|PMID:25788287)
ARUK-UCL PMID:25788287 MGI:MGI:6148484, RGD:13514090 NCBI chrNW_004936522:4,872,360...4,939,873 JBrowse link
G Rasgrp2 RAS guanyl releasing protein 2 ISO (PMID:24958846) UniProtKB PMID:24958846 NCBI chrNW_004936599:4,567,385...4,579,607 JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 ISO (PMID:19074138) UniProtKB PMID:19074138 NCBI chrNW_004936473:27,883,526...27,963,994 JBrowse link
G Slc25a23 solute carrier family 25 member 23 ISO (MGI:MGI:5490167|PMID:23344948) MGI PMID:23344948 MGI:MGI:5490167 NCBI chrNW_004936588:3,792,760...3,804,788 JBrowse link
G Slc25a24 solute carrier family 25 member 24 ISO (PMID:22015608) UniProtKB PMID:22015608 NCBI chrNW_004936731:173,366...224,156 JBrowse link
G Syt1 synaptotagmin 1 ISO PMID:12526776 ParkinsonsUK-UCL PMID:12526776 RGD:10047386 NCBI chrNW_004936698:65,210...575,538 JBrowse link
G Tjp1 tight junction protein 1 ISO (PMID:8636221) UniProtKB PMID:8636221 NCBI chrNW_004936483:1,814,870...2,045,802 JBrowse link
G Trpm2 transient receptor potential cation channel subfamily M member 2 ISO (PMID:19171771) UniProtKB PMID:19171771 NCBI chrNW_004936500:21,960...76,895 JBrowse link
G Wnk1 WNK lysine deficient protein kinase 1 ISO PMID:24803536 UniProt PMID:24803536 RGD:12910999 NCBI chrNW_004936606:933,637...1,069,885 JBrowse link
G Wnt5a Wnt family member 5A ISO (PMID:18703641) UniProtKB PMID:18703641 NCBI chrNW_004936473:6,031,627...6,052,211 JBrowse link
cellular response to carbon dioxide term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trpa1 transient receptor potential cation channel subfamily A member 1 ISO RGD PMID:20881114 RGD:10043825 NCBI chrNW_004936648:1,094,460...1,141,394 JBrowse link
cellular response to carbon monoxide term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnm2 dynamin 2 ISO RGD PMID:25100282 RGD:9685289 NCBI chrNW_004936659:957,408...1,046,393 JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO RGD PMID:17475674 RGD:9068879 NCBI chrNW_004936495:5,770,988...5,816,157 JBrowse link
cellular response to chromate term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bad BCL2 associated agonist of cell death ISO RGD PMID:21262251 RGD:5128585 NCBI chrNW_004936599:4,924,349...4,933,683 JBrowse link
cellular response to cobalt ion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha ISO RGD PMID:23814049 RGD:11341692 NCBI chrNW_004936683:2,874,022...2,936,214 JBrowse link
G Bnip3 BCL2 interacting protein 3 ISO (PMID:20436456) BHF-UCL PMID:20436456 NCBI chrNW_004936486:18,449,371...18,460,435 JBrowse link
G Fas Fas cell surface death receptor ISO RGD PMID:15519734 RGD:8662904 NCBI chrNW_004936735:209,369...234,582 JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO RGD PMID:10559391 RGD:2313660 NCBI chrNW_004936495:5,770,988...5,816,157 JBrowse link
G Serpinf1 serpin family F member 1 ISO RGD PMID:21922517 RGD:8554899 NCBI chrNW_004936538:7,885,816...7,898,308 JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase ISO (PMID:25928429) UniProtKB PMID:25928429 NCBI chrNW_004936606:4,518,525...4,540,109 JBrowse link
cellular response to copper ion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aoc1 amine oxidase copper containing 1 ISO (PMID:9399025) UniProtKB PMID:9399025 NCBI chrNW_004936527:6,309,210...6,312,869 JBrowse link
G App amyloid beta precursor protein ISO RGD PMID:18583042 RGD:13782134 NCBI chrNW_004936640:1,549,977...1,787,436 JBrowse link
G Aqp1 aquaporin 1 (Colton blood group) ISO (PMID:7491270), (PMID:8584435) UniProtKB PMID:7491270, PMID:8584435 NCBI chrNW_004936478:7,146,997...7,160,369 JBrowse link
G Aqp2 aquaporin 2 ISO (PMID:8584435) UniProtKB PMID:8584435 NCBI chrNW_004936512:7,628,677...7,633,344 JBrowse link
G Atp7a ATPase copper transporting alpha ISO RGD PMID:20671235, PMID:23174565 RGD:11341702, RGD:11341707 NCBI chrNW_004936683:2,874,022...2,936,214 JBrowse link
G Atp7b ATPase copper transporting beta ISO RGD PMID:24614235 RGD:11341682 NCBI chrNW_004936565:4,694,294...4,763,661 JBrowse link
G Bace1 beta-secretase 1 ISO RGD PMID:18583042 RGD:13782134 NCBI chrNW_004936542:2,514,297...2,539,088 JBrowse link
G Becn1 beclin 1 ISO RGD PMID:22540380 RGD:11561917 NCBI chrNW_004936490:17,518,100...17,531,126 JBrowse link
G Daxx death domain associated protein ISO (PMID:15016915) UniProtKB PMID:15016915 NCBI chrNW_004936476:25,546,091...25,550,390 JBrowse link
G Eln elastin ISO RGD PMID:18847363 RGD:9585685 NCBI chrNW_004936543:3,135,169...3,165,023 JBrowse link
G Hsf1 heat shock transcription factor 1 ISO (PMID:15016915) UniProtKB PMID:15016915 NCBI chrNW_004936470:7,927,734...7,950,805 JBrowse link
G LOC101969148 cytochrome P450 1A1 ISO RGD PMID:24599699 RGD:11352816 NCBI chrNW_004936471:33,682,730...33,688,332 JBrowse link
G LOC101969421 cytochrome P450 1A2 ISO RGD PMID:24599699 RGD:11352816 NCBI chrNW_004936471:33,704,616...33,709,455 JBrowse link
G Map1lc3a microtubule associated protein 1 light chain 3 alpha ISO RGD PMID:22540380 RGD:11561917 NCBI chrNW_004936561:6,104,748...6,106,348 JBrowse link
G Nfe2l1 nuclear factor, erythroid 2 like 1 ISO (MGI:MGI:5577246|PMID:24462598) MGI PMID:24462598 MGI:MGI:5577246 NCBI chrNW_004936490:13,265,269...13,279,164 JBrowse link
G Nfe2l2 nuclear factor, erythroid 2 like 2 ISO (MGI:MGI:5577246|PMID:24462598) MGI PMID:24462598 MGI:MGI:5577246 NCBI chrNW_004936509:6,589,967...6,621,171 JBrowse link
G Prnp prion protein ISO (PMID:16254249) MGI PMID:16254249 NCBI chrNW_004936485:14,104,829...14,118,614 JBrowse link
G Snca synuclein alpha ISO (PMID:21320589) UniProtKB PMID:21320589 NCBI chrNW_004936685:2,077,017...2,175,298 JBrowse link
G Txnrd1 thioredoxin reductase 1 ISO RGD PMID:19781568 RGD:5130971 NCBI chrNW_004936492:10,185,096...10,244,466 JBrowse link
cellular response to hydroxyurea term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX chromatin remodeler ISO (MGI:MGI:5568153|PMID:24651726) UniProtKB PMID:24651726 MGI:MGI:5568153 NCBI chrNW_004936683:2,496,307...2,718,539 JBrowse link
G Blm BLM RecQ like helicase ISO (PMID:23509288) UniProtKB PMID:23509288 NCBI chrNW_004936483:16,194,092...16,295,803 JBrowse link
G Ddi1 DNA damage inducible 1 homolog 1 ISO (PMID:29290612) UniProt PMID:29290612 NCBI chrNW_004936551:4,086,113...4,088,860 JBrowse link
G Ddx11 DEAD/H-box helicase 11 ISO (PMID:23797032), (PMID:26503245) UniProtKB PMID:23797032, PMID:26503245 NCBI chrNW_004936606:181,457...209,286 JBrowse link
G Fmr1 FMRP translational regulator 1 ISO (MGI:MGI:5602914|PMID:24813610) UniProtKB PMID:24813610 MGI:MGI:5602914 NCBI chrNW_004936513:1,290,038...1,327,850 JBrowse link
G LOC101968969 protein DDI1 homolog 2 ISO (PMID:29290612) UniProt PMID:29290612 NCBI chrNW_004936474:3,284,512...3,312,366 JBrowse link
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component ISO (PMID:27427983) UniProtKB PMID:27427983 NCBI chrNW_004936483:1,433,119...1,434,506 JBrowse link
G Rad51 RAD51 recombinase ISO (MGI:MGI:5442243|PMID:22778135) MGI PMID:22778135 MGI:MGI:5442243 NCBI chrNW_004936471:4,119,020...4,136,811 JBrowse link
G Rnf4 ring finger protein 4 ISO RGD PMID:22661230 RGD:9480235 NCBI chrNW_004936477:21,025,040...21,055,821 JBrowse link
G Rtf2 replication termination factor 2 ISO (PMID:29290612) UniProt PMID:29290612 NCBI chrNW_004936875:369,065...414,522 JBrowse link
G Spidr scaffold protein involved in DNA repair ISO (PMID:23509288) UniProtKB PMID:23509288 NCBI chrNW_004936590:4,921,755...5,041,573 JBrowse link
G Timeless timeless circadian regulator ISO (PMID:23797032) UniProtKB PMID:23797032 NCBI chrNW_004936646:780,021...792,856 JBrowse link
G Trex1 three prime repair exonuclease 1 ISO (MGI:MGI:3818783|PMID:18045533) MGI PMID:18045533 MGI:MGI:3818783 NCBI chrNW_004936529:264,535...266,451 JBrowse link
cellular response to iron ion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase copper transporting alpha ISO RGD PMID:19679821, PMID:23174565 RGD:11341702, RGD:11341808 NCBI chrNW_004936683:2,874,022...2,936,214 JBrowse link
G B2m beta-2-microglobulin ISO (PMID:18353247) BHF-UCL PMID:18353247 NCBI chrNW_004936471:7,646,504...7,655,656 JBrowse link
G Bmp6 bone morphogenetic protein 6 ISO (MGI:MGI:4352622|PMID:19252488) BHF-UCL PMID:19252488 MGI:MGI:4352622 NCBI chrNW_004936534:4,707,658...4,871,865 JBrowse link
G Hfe homeostatic iron regulator ISO (PMID:18353247) BHF-UCL PMID:18353247 NCBI chrNW_004936671:1,940,079...1,947,574 JBrowse link
G Slc11a2 solute carrier family 11 member 2 ISO RGD PMID:17663481 RGD:5688717 NCBI chrNW_004936512:8,590,302...8,622,121 JBrowse link
G Tf transferrin ISO (PMID:18353247) BHF-UCL PMID:18353247 NCBI chrNW_004936529:6,856,042...6,895,989 JBrowse link
G Tfap2a transcription factor AP-2 alpha ISO (PMID:20808827) UniProtKB PMID:20808827 NCBI chrNW_004936534:2,481,804...2,518,573 JBrowse link
G Tfr2 transferrin receptor 2 ISO (PMID:18353247) BHF-UCL PMID:18353247 NCBI chrNW_004936543:667,570...681,872 JBrowse link
cellular response to iron(II) ion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 ISO PMID:1849823 UniProt PMID:1849823 RGD:8553426 NCBI chrNW_004936671:780,173...827,628 JBrowse link
G Gsk3b glycogen synthase kinase 3 beta ISO RGD PMID:19608791 RGD:10045561 NCBI chrNW_004936536:6,730,070...6,893,818 JBrowse link
cellular response to iron(III) ion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2-microglobulin ISO (MGI:MGI:1203460|PMID:9531620) MGI PMID:9531620 MGI:MGI:1203460 NCBI chrNW_004936471:7,646,504...7,655,656 JBrowse link
G Ccnb1 cyclin B1 ISO ferric ammonium citrate RGD PMID:18254965 RGD:2316320 NCBI chrNW_004936480:400,287...407,677 JBrowse link
G Ireb2 iron responsive element binding protein 2 ISO RGD PMID:16135072, PMID:17469137 RGD:12904039, RGD:12904046 NCBI chrNW_004936471:36,547,552...36,601,327 JBrowse link
G Mmp1 matrix metallopeptidase 1 ISO RGD PMID:21683124 RGD:7207286 NCBI chrNW_004936551:5,167,909...5,175,149 JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO RGD PMID:21683124 RGD:7207286 NCBI chrNW_004936514:7,038,240...7,045,873 JBrowse link
cellular response to lead ion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase ISO lead, gallium RGD PMID:16566714 RGD:4144781 NCBI chrNW_004936559:226,481...237,258 JBrowse link
G Anxa5 annexin A5 ISO RGD PMID:11578147 RGD:10053705 NCBI chrNW_004936662:926,302...959,964 JBrowse link
G Atp7a ATPase copper transporting alpha ISO RGD PMID:24316150 RGD:11341684 NCBI chrNW_004936683:2,874,022...2,936,214 JBrowse link
G Cldn1 claudin 1 ISO RGD PMID:17439918 RGD:11344879 NCBI chrNW_004936578:98,489...113,125 JBrowse link
G Dnmt1 DNA methyltransferase 1 ISO RGD PMID:22764079 RGD:9588241 NCBI chrNW_004936659:520,181...565,496 JBrowse link
G Hmbs hydroxymethylbilane synthase ISO RGD PMID:16566714 RGD:4144781 NCBI chrNW_004936542:4,037,888...4,046,089 JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:25193092 RGD:13207490 NCBI chrNW_004936481:3,821,564...3,828,086 JBrowse link
cellular response to lithium ion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy7 adenylate cyclase 7 ISO (MGI:MGI:6162268|PMID:18205980) UniProtKB PMID:18205980 MGI:MGI:6162268 NCBI chrNW_004936475:3,368,069...3,393,306 JBrowse link
G Calr calreticulin ISO RGD PMID:16236328 RGD:2326183 NCBI chrNW_004936659:1,994,695...1,999,070 JBrowse link
G Cdh1 cadherin 1 ISO (PMID:12937339) UniProtKB PMID:12937339 NCBI chrNW_004936475:18,990,529...19,065,954 JBrowse link
G Cdkn1b cyclin dependent kinase inhibitor 1B ISO (PMID:19056892) MGI PMID:19056892 NCBI chrNW_004936587:4,573,166...4,578,480 JBrowse link
G Cebpa CCAAT enhancer binding protein alpha ISO (MGI:MGI:3581945|PMID:15673614) MGI PMID:15673614 MGI:MGI:3581945 NCBI chrNW_004936570:2,513,561...2,516,213 JBrowse link
G Ctnnb1 catenin beta 1 ISO RGD PMID:12610652 RGD:10395276 NCBI chrNW_004936473:29,999,542...30,034,610 JBrowse link
G Fabp4 fatty acid binding protein 4 ISO (MGI:MGI:3581945|PMID:15673614) MGI PMID:15673614 MGI:MGI:3581945 NCBI chrNW_004936656:2,722,970...2,727,383 JBrowse link
G Fas Fas cell surface death receptor ISO (MGI:MGI:4829576|PMID:20530871) MGI PMID:20530871 MGI:MGI:4829576 NCBI chrNW_004936735:209,369...234,582 JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha ISO (MGI:MGI:3581945|PMID:15673614) MGI PMID:15673614 MGI:MGI:3581945 NCBI chrNW_004936706:266,462...277,256 JBrowse link
G Gsk3b glycogen synthase kinase 3 beta ISO RGD PMID:18932008 RGD:10045540 NCBI chrNW_004936536:6,730,070...6,893,818 JBrowse link
G Gsta4 glutathione S-transferase alpha 4 ISO RGD PMID:18082333 RGD:2293846 NCBI chrNW_004936476:7,873,218...7,888,301 JBrowse link
G Id2 inhibitor of DNA binding 2 ISO (MGI:MGI:3788965|PMID:18367557) MGI PMID:18367557 MGI:MGI:3788965 NCBI chrNW_004936532:5,236,175...5,238,689 JBrowse link
G Lig4 DNA ligase 4 ISO RGD PMID:19285016 RGD:2317095 NCBI chrNW_004936472:3,861,833...3,867,943 JBrowse link
G Myog myogenin ISO (MGI:MGI:3581945|PMID:15673614) MGI PMID:15673614 MGI:MGI:3581945 NCBI chrNW_004936567:1,507,042...1,509,814 JBrowse link
G Nfatc3 nuclear factor of activated T cells 3 ISO (MGI:MGI:4829576|PMID:20530871) MGI PMID:20530871 MGI:MGI:4829576 NCBI chrNW_004936475:18,462,424...18,557,832 JBrowse link
G Nfatc4 nuclear factor of activated T cells 4 ISO (MGI:MGI:4829576|PMID:20530871) MGI PMID:20530871 MGI:MGI:4829576 NCBI chrNW_004936722:178,866...187,847 JBrowse link
G Nos2 nitric oxide synthase 2 ISO RGD PMID:21994254 RGD:5508722 NCBI chrNW_004936538:4,052,277...4,097,051 JBrowse link
G Nts neurotensin ISO RGD PMID:7898306 RGD:9743905 NCBI chrNW_004936507:3,318,982...3,329,248 JBrowse link
G Pparg peroxisome proliferator activated receptor gamma ISO (MGI:MGI:3581945|PMID:15673614) MGI PMID:15673614 MGI:MGI:3581945 NCBI chrNW_004936602:1,230,907...1,368,588 JBrowse link
G Shh sonic hedgehog signaling molecule ISO (MGI:MGI:3703195|PMID:17284610) MGI PMID:17284610 MGI:MGI:3703195 NCBI chrNW_004936527:10,033,095...10,042,713 JBrowse link
G Slc18a1 solute carrier family 18 member A1 ISO RGD PMID:11080216 RGD:5131196 NCBI chrNW_004936555:4,249,821...4,271,379 JBrowse link
G Tph2 tryptophan hydroxylase 2 ISO RGD PMID:19840776 RGD:2317083 NCBI chrNW_004936568:974,575...1,065,800 JBrowse link
G Xrcc4 X-ray repair cross complementing 4 ISO RGD PMID:19285016 RGD:2317095 NCBI chrNW_004936469:2,248,367...2,495,215 JBrowse link
cellular response to magnesium ion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank3 ankyrin 3 ISO (MGI:MGI:5613458|PMID:23903368) UniProtKB PMID:23903368 MGI:MGI:5613458 NCBI chrNW_004936614:2,664,594...2,976,174 JBrowse link
G Fbp1 fructose-bisphosphatase 1 ISO (PMID:10222032) UniProtKB PMID:10222032 NCBI chrNW_004936626:3,555,835...3,581,651 JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:19154422 RGD:2326036 NCBI chrNW_004936530:8,286,101...8,612,183 JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 ISO (MGI:MGI:5613458|PMID:23903368) UniProtKB PMID:23903368 MGI:MGI:5613458 NCBI chrNW_004937109:142,711...144,257 JBrowse link
G Kcnj1 potassium inwardly rectifying channel subfamily J member 1 ISO RGD PMID:21030597 RGD:7244391 NCBI chrNW_004936572:3,396,329...3,425,848 JBrowse link
G Nos3 nitric oxide synthase 3 ISO RGD PMID:15919495 RGD:7794721 NCBI chrNW_004936527:6,427,147...6,445,770 JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:20350433 RGD:4892212 NCBI chrNW_004936504:10,960,069...11,056,834 JBrowse link
G Slc41a1 solute carrier family 41 member 1 ISO (MGI:MGI:5780542|PMID:15713785)
(PMID:21696366)
ParkinsonsUK-UCL PMID:15713785, PMID:21696366 MGI:MGI:5780542 NCBI chrNW_004936557:6,640,197...6,662,128 JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 ISO (MGI:MGI:5529577|PMID:23973266) MGI PMID:23973266 MGI:MGI:5529577 NCBI chrNW_004936475:18,667,563...18,755,132 JBrowse link
cellular response to manganese ion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A3galt2 alpha 1,3-galactosyltransferase 2 ISO RGD PMID:1569388 RGD:13831122 NCBI chrNW_004936474:16,135,076...16,138,930 JBrowse link
G App amyloid beta precursor protein ISO RGD PMID:18583042 RGD:13782134 NCBI chrNW_004936640:1,549,977...1,787,436 JBrowse link
G Atp13a2 ATPase cation transporting 13A2 ISO (PMID:22285144) ParkinsonsUK-UCL PMID:22285144 NCBI chrNW_004936474:3,968,216...3,980,821 JBrowse link
G Atp7b ATPase copper transporting beta ISO RGD PMID:24614235 RGD:11341682 NCBI chrNW_004936565:4,694,294...4,763,661 JBrowse link
G Bace1 beta-secretase 1 ISO RGD PMID:18583042 RGD:13782134 NCBI chrNW_004936542:2,514,297...2,539,088 JBrowse link
G Dbh dopamine beta-hydroxylase ISO RGD PMID:19276553 RGD:5129515 NCBI chrNW_004936669:3,302,014...3,326,233 JBrowse link
G Ddit3 DNA damage inducible transcript 3 ISO PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chrNW_004936646:1,665,019...1,669,212 JBrowse link
G Ern1 endoplasmic reticulum to nucleus signaling 1 ISO PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chrNW_004936541:4,613,197...4,705,911 JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 ISO RGD PMID:19643132 RGD:2325970 NCBI chrNW_004936669:814,330...838,881 JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:19643132 RGD:2325970 NCBI chrNW_004936530:8,286,101...8,612,183 JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B ISO RGD PMID:19643132 RGD:2325970 NCBI chrNW_004936587:3,406,055...3,806,956 JBrowse link
G Hsp90b1 heat shock protein 90 beta family member 1 ISO PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chrNW_004936492:10,513,908...10,528,281 JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 ISO PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chrNW_004936487:13,348,465...13,352,717 JBrowse link
G Ireb2 iron responsive element binding protein 2 ISO RGD PMID:16568477, PMID:17469137 RGD:12904039, RGD:12904041 NCBI chrNW_004936471:36,547,552...36,601,327 JBrowse link
G Lrrk2 leucine rich repeat kinase 2 ISO (PMID:23628791) ParkinsonsUK-UCL PMID:23628791 NCBI chrNW_004936607:628,469...761,117 JBrowse link
G Mfn2 mitofusin 2 ISO RGD PMID:28232070 RGD:12910738 NCBI chrNW_004936474:767,754...795,258 JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO RGD PMID:19781568 RGD:5130971 NCBI chrNW_004936489:12,118,538...12,913,664 JBrowse link
G Th tyrosine hydroxylase ISO RGD PMID:19781568 RGD:5130971 NCBI chrNW_004936794:478,651...486,887 JBrowse link
cellular response to mercury ion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 (Colton blood group) ISO (PMID:12172703), (PMID:12745312), (PMID:7491270), (PMID:8584435), (PMID:9321919) UniProtKB PMID:7491270, PMID:8584435, PMID:9321919, PMID:12172703, PMID:12745312 NCBI chrNW_004936478:7,146,997...7,160,369 JBrowse link
G Aqp2 aquaporin 2 ISO (PMID:8584435) UniProtKB PMID:8584435 NCBI chrNW_004936512:7,628,677...7,633,344 JBrowse link
G Fn1 fibronectin 1 ISO RGD PMID:11768240 RGD:729934 NCBI chrNW_004936586:1,708,803...1,773,372 JBrowse link
G Il4 interleukin 4 ISO RGD PMID:7657819, PMID:19604304 RGD:2317279, RGD:2317674 NCBI chrNW_004936647:2,510,457...2,518,576 JBrowse link
G Ube2d3 ubiquitin conjugating enzyme E2 D3 ISO RGD PMID:24212999 RGD:13830869 NCBI chrNW_004936520:555,878...588,052 JBrowse link
cellular response to metal ion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd86 CD86 molecule ISO titanium oxide particles RGD PMID:19653805 RGD:4892213 NCBI chrNW_004936536:8,414,491...8,481,712 JBrowse link
G Fstl3 follistatin like 3 ISO potassium RGD PMID:14692692 RGD:1302294 NCBI chrNW_004936588:250,359...255,922 JBrowse link
G Hsd17b1 hydroxysteroid 17-beta dehydrogenase 1 ISO hexavalent chromium RGD PMID:18602937 RGD:4890967 NCBI chrNW_004936490:17,312,390...17,314,423 JBrowse link
G Hsd17b2 hydroxysteroid 17-beta dehydrogenase 2 ISO hexavalent chromium RGD PMID:18602937 RGD:4890967 NCBI chrNW_004936475:29,426,922...29,494,215 JBrowse link
G Nqo1 NAD(P)H quinone dehydrogenase 1 ISO lanthanum RGD PMID:28722058 RGD:13439714 NCBI chrNW_004936475:19,771,384...19,785,034 JBrowse link
G Serpine1 serpin family E member 1 ISO barium RGD PMID:21596853 RGD:8547918 NCBI chrNW_004936543:1,032,543...1,040,956 JBrowse link
G Slc34a1 solute carrier family 34 member 1 ISO uranium RGD PMID:16476458 RGD:7243141 NCBI chrNW_004936597:1,667,700...1,684,533 JBrowse link
G Star steroidogenic acute regulatory protein ISO hexavalent chromium RGD PMID:18602937 RGD:4890967 NCBI chrNW_004936710:1,523,289...1,530,181 JBrowse link
cellular response to nitric oxide term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aifm1 apoptosis inducing factor mitochondria associated 1 ISO RGD PMID:18560609 RGD:10053561 NCBI chrNW_004936479:1,441,508...1,477,133 JBrowse link
G Aqp1 aquaporin 1 (Colton blood group) ISO (PMID:14561230) UniProtKB PMID:14561230 NCBI chrNW_004936478:7,146,997...7,160,369 JBrowse link
G Atp5f1a ATP synthase F1 subunit alpha ISO RGD PMID:25658244 RGD:11352582 NCBI chrNW_004936517:743,036...752,836 JBrowse link
G Atp5f1c ATP synthase F1 subunit gamma ISO RGD PMID:25658244 RGD:11352582 NCBI chrNW_004936484:7,016,049...7,031,060 JBrowse link
G Bcar1 BCAR1 scaffold protein, Cas family member ISO RGD PMID:12714323 RGD:1298802 NCBI chrNW_004936475:23,994,130...24,032,829 JBrowse link
G Ccna2 cyclin A2 ISO RGD PMID:9610538 RGD:10054495 NCBI chrNW_004936662:1,073,460...1,079,136 JBrowse link
G Cflar CASP8 and FADD like apoptosis regulator ISO RGD PMID:18292530 RGD:11341712 NCBI chrNW_004936726:381,888...425,565 JBrowse link
G Crk CRK proto-oncogene, adaptor protein ISO RGD PMID:12714323 RGD:1298802 NCBI chrNW_004936538:7,581,453...7,609,543 JBrowse link
G Crp C-reactive protein ISO RGD PMID:9704587 RGD:9586007 NCBI chrNW_004936740:885,855...888,854 JBrowse link
G Dnm2 dynamin 2 ISO RGD PMID:25100282 RGD:9685289 NCBI chrNW_004936659:957,408...1,046,393 JBrowse link
G Dpep1 dipeptidase 1 ISO (PMID:11988094) UniProt PMID:11988094 NCBI chrNW_004936641:379,112...384,711 JBrowse link
G Foxo1 forkhead box O1 ISO (MGI:MGI:5437421|PMID:21196578) UniProtKB PMID:21196578 MGI:MGI:5437421 NCBI chrNW_004936565:5,210,014...5,299,213 JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:16683234 RGD:10042976 NCBI chrNW_004936738:2,096,370...2,115,135 JBrowse link
G Kcnc2 potassium voltage-gated channel subfamily C member 2 ISO PMID:11281123 UniProt PMID:11281123 RGD:10047322 NCBI chrNW_004936568:3,508,212...3,694,459 JBrowse link
G Mapk8 mitogen-activated protein kinase 8 ISO (MGI:MGI:3837511|PMID:18007661) MGI PMID:18007661 MGI:MGI:3837511 NCBI chrNW_004936728:1,775,746...1,893,895 JBrowse link
G Mt3 metallothionein 3 ISO (PMID:18157556) UniProtKB PMID:18157556 NCBI chrNW_004936475:8,864,512...8,866,516 JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ISO PMID:20424322 BHF-UCL PMID:20424322 RGD:10054082 NCBI chrNW_004936484:16,087,924...16,180,089 JBrowse link
G Sftpb surfactant protein B ISO RGD PMID:15640287 RGD:4143401 NCBI chrNW_004936712:1,614,979...1,621,207 JBrowse link
G Sftpc surfactant protein C ISO RGD PMID:15640287 RGD:4143401 NCBI chrNW_004936555:5,966,610...5,982,083 JBrowse link
G Thbs1 thrombospondin 1 ISO (MGI:MGI:3603989|PMID:16150726) MGI PMID:16150726 MGI:MGI:3603989 NCBI chrNW_004936471:3,064,466...3,081,125 JBrowse link
G Tpo thyroid peroxidase ISO RGD PMID:17714035 RGD:7207473 NCBI chrNW_004936532:391,181...435,132 JBrowse link
G Traf2 TNF receptor associated factor 2 ISO (MGI:MGI:3837511|PMID:18007661) MGI PMID:18007661 MGI:MGI:3837511 NCBI chrNW_004936669:1,004,891...1,034,913 JBrowse link
cellular response to nitrite term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hif1a hypoxia inducible factor 1 subunit alpha ISO RGD PMID:23227543 RGD:9068878 NCBI chrNW_004936495:5,770,988...5,816,157 JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:22892143 RGD:7242065 NCBI chrNW_004936477:4,881,230...5,488,208 JBrowse link
cellular response to nitrogen dioxide term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnfsf4 TNF superfamily member 4 ISO (MGI:MGI:4943801|PMID:20659336) BHF-UCL PMID:20659336 MGI:MGI:4943801 NCBI chrNW_004936481:14,391,359...14,409,514 JBrowse link
cellular response to potassium ion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1h calcium voltage-gated channel subunit alpha1 H ISO (PMID:19342457) UniProtKB PMID:19342457 NCBI chrNW_004936694:2,702,224...2,724,574 JBrowse link
G Carf calcium responsive transcription factor ISO (PMID:22174809) UniProtKB PMID:22174809 NCBI chrNW_004936726:1,958,561...2,010,972 JBrowse link
G Crhbp corticotropin releasing hormone binding protein ISO (PMID:21624661) UniProtKB PMID:21624661 NCBI chrNW_004936549:64,866...78,272 JBrowse link
G Dlg2 discs large MAGUK scaffold protein 2 ISO (MGI:MGI:5703671|PMID:26609151) ARUK-UCL PMID:26609151 MGI:MGI:5703671 NCBI chrNW_004936498:11,549,526...13,519,638 JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 ISO (MGI:MGI:5703671|PMID:26609151) ARUK-UCL PMID:26609151 MGI:MGI:5703671 NCBI chrNW_004936595:487,918...513,843 JBrowse link
G Fmr1 FMRP translational regulator 1 ISO RGD PMID:15028757 RGD:1300188 NCBI chrNW_004936513:1,290,038...1,327,850 JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 ISO RGD PMID:17298175 RGD:10045993 NCBI chrNW_004936512:11,481,017...11,487,737 JBrowse link
G Hsf1 heat shock transcription factor 1 ISO RGD PMID:24478344 RGD:10402566 NCBI chrNW_004936470:7,927,734...7,950,805 JBrowse link
G Mecp2 methyl-CpG binding protein 2 ISO RGD PMID:14593183 RGD:12790707 NCBI chrNW_004936809:902,938...967,771 JBrowse link
G Mylk myosin light chain kinase ISO (MGI:MGI:3805620|PMID:18524939) MGI PMID:18524939 MGI:MGI:3805620 NCBI chrNW_004936725:1,418,930...1,594,697 JBrowse link
G Nptx1 neuronal pentraxin 1 ISO RGD PMID:22279230 RGD:6903322 NCBI chrNW_004936594:4,373,500...4,384,394 JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:17870059 RGD:10059655 NCBI chrNW_004936477:4,881,230...5,488,208 JBrowse link
G Serpine1 serpin family E member 1 ISO RGD PMID:21596853 RGD:8547918 NCBI chrNW_004936543:1,032,543...1,040,956 JBrowse link
G Slc12a2 solute carrier family 12 member 2 ISO (MGI:MGI:6392919|PMID:11940530) ARUK-UCL PMID:11940530 MGI:MGI:6392919 NCBI chrNW_004936504:1,378,812...1,465,463 JBrowse link
G Sod1 superoxide dismutase 1 ISO RGD PMID:17403136 RGD:8657024 NCBI chrNW_004936500:10,345,154...10,352,873 JBrowse link
cellular response to selenite ion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif4a3 eukaryotic translation initiation factor 4A3 ISO RGD PMID:19716792 RGD:10045552 NCBI chrNW_004936594:4,148,401...4,160,290 JBrowse link
cellular response to zinc ion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Creb1 cAMP responsive element binding protein 1 ISO (MGI:MGI:5492261|PMID:23716681) MGI PMID:23716681 MGI:MGI:5492261 NCBI chrNW_004936631:3,721,307...3,785,346 JBrowse link
G Glra1 glycine receptor alpha 1 ISO (PMID:16144831) UniProtKB PMID:16144831 NCBI chrNW_004936515:10,816,712...10,896,958 JBrowse link
G Glra2 glycine receptor alpha 2 ISO (PMID:23895467) UniProtKB PMID:23895467 NCBI chrNW_004936470:4,014,897...4,202,625 JBrowse link
G Glra3 glycine receptor alpha 3 ISO PMID:23895467 UniProt PMID:23895467 RGD:11035333 NCBI chrNW_004936516:5,692,535...5,855,694 JBrowse link
G Gpr39 G protein-coupled receptor 39 ISO (MGI:MGI:5707553|PMID:26375174)
(MGI:MGI:5464224|PMID:23133519)
MGI PMID:23133519, PMID:26375174 MGI:MGI:5464224, MGI:MGI:5707553 NCBI chrNW_004936469:55,973,001...55,974,070 JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:19240037 RGD:2326029 NCBI chrNW_004936530:8,286,101...8,612,183 JBrowse link
G Hvcn1 hydrogen voltage gated channel 1 ISO (PMID:22020278) UniProtKB PMID:22020278 NCBI chrNW_004936558:3,581,409...3,609,714 JBrowse link
G Kcnk3 potassium two pore domain channel subfamily K member 3 ISO RGD PMID:9437008 RGD:61647 NCBI chrNW_004936493:5,767,779...5,772,043 JBrowse link
G Mtf1 metal regulatory transcription factor 1 ISO (MGI:MGI:5577232|PMID:24529376) UniProt PMID:24529376 MGI:MGI:5577232 NCBI chrNW_004936474:19,981,483...20,027,541 JBrowse link
G P2rx4 purinergic receptor P2X 4 ISO PMID:8551329 UniProt PMID:8551329 RGD:61682 NCBI chrNW_004936558:3,062,279...3,077,493 JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 ISO RGD PMID:23582235 RGD:10414068 NCBI chrNW_004936526:3,102,468...3,147,601 JBrowse link
G Tspo translocator protein ISO RGD PMID:18709649 RGD:2317141 NCBI chrNW_004936718:992,301...995,172 JBrowse link
G Znf658 zinc finger protein 658 ISO (PMID:25582195) UniProtKB PMID:25582195 NCBI chrNW_004936487:1,494,915...1,509,548 JBrowse link
positive regulation of transcription from RNA polymerase II promoter in response to calcium ion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carf calcium responsive transcription factor ISO (PMID:11832226), (PMID:22174809) UniProtKB
UniProt
PMID:11832226, PMID:22174809 RGD:8553337 NCBI chrNW_004936726:1,958,561...2,010,972 JBrowse link
regulation of cellular response to manganese ion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc30a10 solute carrier family 30 member 10 ISO (PMID:25319704) UniProtKB PMID:25319704 NCBI chrNW_004936650:2,252,554...2,267,990 JBrowse link
regulation of transcription from RNA polymerase II promoter in response to iron term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmox1 heme oxygenase 1 ISO (MGI:MGI:5527134|PMID:23395172) MGI PMID:23395172 MGI:MGI:5527134 NCBI chrNW_004936492:5,042,353...5,049,216 JBrowse link
G Hrg histidine rich glycoprotein ISO (MGI:MGI:5527134|PMID:23395172) MGI PMID:23395172 MGI:MGI:5527134 NCBI chrNW_004936578:3,285,986...3,295,876 JBrowse link
G Slc40a1 solute carrier family 40 member 1 ISO (MGI:MGI:5527134|PMID:23395172) MGI PMID:23395172 MGI:MGI:5527134 NCBI chrNW_004936506:8,396,593...8,415,069 JBrowse link
response to manganese-induced endoplasmic reticulum stress term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf4 activating transcription factor 4 ISO PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chrNW_004936492:2,114,478...2,115,969 JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 ISO PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chrNW_004936712:413,602...454,443 JBrowse link
G Eif2s1 eukaryotic translation initiation factor 2 subunit alpha ISO PMID:23934647 ParkinsonsUK-UCL PMID:23934647 RGD:10047151 NCBI chrNW_004936495:10,746,687...10,769,304 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11998
    response to stimulus 6422
      response to chemical 3752
        response to inorganic substance 695
          cellular response to inorganic substance 240
            cellular response to azide 1
            cellular response to bismuth 0
            cellular response to carbon dioxide 1
            cellular response to carbon monoxide 2
            cellular response to chlorate 0
            cellular response to chromate 1
            cellular response to hydroxyurea 13
            cellular response to metal ion + 203
            cellular response to nitrate 0
            cellular response to nitric oxide 22
            cellular response to nitrite 2
            cellular response to nitrogen dioxide 1
            cellular response to selenite ion 1
            cellular response to silicon dioxide 0
            cellular response to sulfur dioxide 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.