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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to fatty acid
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Accession:GO:0071398 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fatty acid stimulus.


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cellular response to fatty acid term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat2 acetyl-CoA acetyltransferase 2 IEP fish oil chylomicron remnants RGD PMID:11786296 RGD:1598704 NCBI chr 1:47,972,399...47,992,654
Ensembl chr 1:47,972,399...47,992,653
JBrowse link
G Adipor2 adiponectin receptor 2 IEP RGD PMID:21194380 RGD:24922202 NCBI chr 4:151,412,135...151,480,108
Ensembl chr 4:151,414,684...151,428,894
JBrowse link
G Ager advanced glycosylation end product-specific receptor IEP RGD PMID:22217518 RGD:7245568 NCBI chr20:4,363,152...4,366,079
Ensembl chr20:4,363,152...4,366,079
JBrowse link
G Aldh2 aldehyde dehydrogenase 2 family member IEP RGD PMID:11463352 RGD:2306342 NCBI chr12:40,466,418...40,498,813
Ensembl chr12:40,466,495...40,498,752
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 IEP leukotriene B4 RGD PMID:14656734 RGD:11526147 NCBI chr10:69,412,065...69,413,863
Ensembl chr10:69,412,017...69,413,870
JBrowse link
G Ccnb1 cyclin B1 IEP butyrate RGD PMID:14674679 RGD:2316349 NCBI chr 2:30,782,133...30,791,106
Ensembl chr 2:30,783,915...30,791,221
JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A IEP palmitate RGD PMID:19332540 RGD:7242708 NCBI chr 1:218,568,157...218,629,679
Ensembl chr 1:218,569,510...218,629,678
JBrowse link
G Creb1 cAMP responsive element binding protein 1 IEP RGD PMID:16382163 RGD:10059371 NCBI chr 9:71,229,753...71,298,994
Ensembl chr 9:71,230,108...71,293,435
JBrowse link
G E2f1 E2F transcription factor 1 IEP RGD PMID:19180667 RGD:2316259 NCBI chr 3:150,062,895...150,073,721
Ensembl chr 3:150,047,826...150,073,721
JBrowse link
G Edn1 endothelin 1 IEP lysophosphatidic acid RGD PMID:9784597 RGD:8662270 NCBI chr17:22,136,814...22,143,745
Ensembl chr17:22,137,324...22,143,324
JBrowse link
G Fdps farnesyl diphosphate synthase IEP RGD PMID:15473864 RGD:2316296 NCBI chr 2:188,403,595...188,413,219
Ensembl chr 2:188,392,858...188,413,219
JBrowse link
G Ffar2 free fatty acid receptor 2 IDA
ISO
PMID:23589301
(MGI:4366644|PMID:19865172), (MGI:5572877|PMID:16123168), (MGI:5574283|PMID:23589301), (MGI:5575446|PMID:23665276)
(PMID:12496283), (PMID:18801738), (PMID:23589301)
RGD PMID:12496283, PMID:16123168, PMID:18801738, PMID:19865172, PMID:23589301, PMID:23665276, PMID:23589301 MGI:4366644, MGI:5572877, MGI:5574283, MGI:5575446, RGD:8693374 NCBI chr 1:89,268,197...89,271,942
Ensembl chr 1:89,268,938...89,269,930
JBrowse link
G Ffar3 free fatty acid receptor 3 IDA
ISO
PMID:12496283
(MGI:5429475|PMID:22673524), (MGI:5572885|PMID:14722361), (MGI:5575446|PMID:23665276)
(PMID:12496283), (PMID:14722361), (PMID:18801738)
RGD PMID:12496283, PMID:14722361, PMID:18801738, PMID:22673524, PMID:23665276, PMID:12496283 MGI:5429475, MGI:5572885, MGI:5575446, RGD:8693366 NCBI chr 1:89,302,035...89,304,064
Ensembl chr 1:89,302,039...89,303,968
JBrowse link
G Hes1 hes family bHLH transcription factor 1 IEP docosahexaenoic acid RGD PMID:19272428 RGD:9685381 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 IEP vaccenic acid, elaidic acid RGD PMID:20508999 RGD:2326106 NCBI chr 2:200,452,623...200,480,785
Ensembl chr 2:200,452,624...200,479,423
JBrowse link
G Il1b interleukin 1 beta IEP RGD PMID:23086551 RGD:7204439 NCBI chr 3:121,876,256...121,882,637
Ensembl chr 3:121,876,263...121,882,726
JBrowse link
G Irs1 insulin receptor substrate 1 ISO (MGI:6282942|PMID:21986524) RGD PMID:21986524 MGI:6282942 NCBI chr 9:88,033,668...88,086,488
Ensembl chr 9:88,033,668...88,086,488
JBrowse link
G Kcnk4 potassium two pore domain channel subfamily K member 4 IDA
ISO
PMID:15677687
(PMID:22282805)
RGD PMID:22282805, PMID:15677687 RGD:10047327 NCBI chr 1:222,182,997...222,192,139
Ensembl chr 1:222,183,276...222,189,604
JBrowse link
G Ldlr low density lipoprotein receptor IEA
ISO
GO_REF:0000107
RNAcentral:URS0000329B12_10090 (MGI:5659826|PMID:24255059)
Ensembl
RGD
PMID:24255059 GO_REF:0000107, MGI:5659826 NCBI chr 8:22,750,425...22,773,305
Ensembl chr 8:22,750,336...22,774,903
JBrowse link
G LOC100909612 mitochondrial brown fat uncoupling protein 1-like IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr19:29,395,702...29,400,389
Ensembl chr19:29,396,157...29,400,355
JBrowse link
G Lpl lipoprotein lipase ISO (MGI:6282942|PMID:21986524) RGD PMID:21986524 MGI:6282942 NCBI chr16:22,537,687...22,561,487
Ensembl chr16:22,537,056...22,561,496
JBrowse link
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 IEP palmitate RGD PMID:19367376 RGD:5132883 NCBI chr10:81,657,152...81,666,542
Ensembl chr10:81,657,153...81,666,523
JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 IEP palmitate RGD PMID:19367376 RGD:5132883 NCBI chr10:81,648,216...81,653,717
Ensembl chr10:81,648,216...81,653,717
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 IEA
ISO
GO_REF:0000107
(PMID:20447400)
Ensembl
RGD
PMID:20447400 GO_REF:0000107 NCBI chr 7:30,003,429...30,162,095
Ensembl chr 7:30,003,429...30,162,056
JBrowse link
G Olr59 olfactory receptor 59 IEA
ISO
ISS
GO_REF:0000107
(MGI:5574287|PMID:23401498)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23401498 GO_REF:0000024, GO_REF:0000107, MGI:5574287 NCBI chr 1:167,906,030...167,940,688
Ensembl chr 1:167,906,061...167,911,961
JBrowse link
G Pdk3 pyruvate dehydrogenase kinase 3 ISO (PMID:20715114) RGD PMID:20715114 NCBI chr  X:62,836,131...62,904,114
Ensembl chr  X:62,836,131...62,903,554
JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:20715114)
Ensembl
UniProt
RGD
PMID:20715114 GO_REF:0000024, GO_REF:0000107 NCBI chr 4:30,546,772...30,556,774
Ensembl chr 4:30,546,664...30,556,814
JBrowse link
G Pid1 phosphotyrosine interaction domain containing 1 ISO (MGI:5308004|PMID:19894142) RGD PMID:19894142 MGI:5308004 NCBI chr 9:91,667,748...91,683,468
Ensembl chr 9:91,665,986...91,882,927
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 IEP linoleic acid RGD PMID:17593346 RGD:4108505 NCBI chr 2:31,742,326...31,826,882
Ensembl chr 2:31,745,088...31,826,867
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:22676303 RGD:7242169 NCBI chr14:63,095,291...63,190,688
Ensembl chr14:63,095,720...63,187,009
JBrowse link
G Ptafr platelet-activating factor receptor IEP arachidonic acid, docosahexaenoic acid RGD PMID:17515866 RGD:9999208 NCBI chr 5:150,746,284...150,775,675
Ensembl chr 5:150,754,021...150,775,672
JBrowse link
G Smarcd1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 IEP RGD PMID:24615205 RGD:9586357 NCBI chr 7:141,355,623...141,366,725
Ensembl chr 7:141,355,994...141,366,732
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase IEP butyrate RGD PMID:20149623 RGD:2325014 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 IEP palmitate RGD PMID:19332540 RGD:7242708 NCBI chr10:46,570,996...46,593,021
Ensembl chr10:46,570,996...46,593,009
JBrowse link
G Ucp1 uncoupling protein 1 IDA
ISO
PMID:22952235
(MGI:5444314|PMID:23063128)
RGD PMID:23063128, PMID:22952235 MGI:5444314, RGD:11541104 NCBI chr19:24,456,976...24,464,808
Ensembl chr19:24,456,976...24,464,807
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 IEP RGD PMID:19180667 RGD:2316259 NCBI chr 9:79,659,275...79,748,050
Ensembl chr 9:79,659,251...79,748,078
JBrowse link
cellular response to butyrate term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn1 claudin 1 IEP RGD PMID:22684624 RGD:11341733 NCBI chr11:77,815,216...77,830,373
Ensembl chr11:77,815,181...77,830,416
JBrowse link
G Hspb1 heat shock protein family B (small) member 1 IEP RGD PMID:11522747 RGD:10402752 NCBI chr12:23,839,390...23,841,051
Ensembl chr12:23,839,399...23,841,049
JBrowse link
cellular response to ionomycin term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk4 cyclin-dependent kinase 4 ISO (MGI:78049|PMID:8543804) RGD PMID:8543804 MGI:78049 NCBI chr 7:70,345,971...70,352,689
Ensembl chr 7:70,349,863...70,352,418
JBrowse link
G Foxp1 forkhead box P1 IDA RGD PMID:21606195 RGD:11561924 NCBI chr 4:131,362,178...131,963,466
Ensembl chr 4:131,366,744...131,694,755
JBrowse link
G Nfatc4 nuclear factor of activated T-cells 4 IDA RGD PMID:21606195 RGD:11561924 NCBI chr15:34,493,163...34,502,238
Ensembl chr15:34,493,138...34,504,326
JBrowse link
G Plcb1 phospholipase C beta 1 IDA RGD PMID:11377826 RGD:8554253 NCBI chr 3:127,721,244...128,419,565
Ensembl chr 3:128,155,069...128,419,545
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:17516843 RGD:10059651 NCBI chr14:63,095,291...63,190,688
Ensembl chr14:63,095,720...63,187,009
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A ISS
ISO
GO_REF:0000024
(MGI:5706909|PMID:23185455)
UniProt
RGD
PMID:23185455 GO_REF:0000024, MGI:5706909 NCBI chr 5:143,111,342...143,120,131
Ensembl chr 5:143,111,074...143,120,165
JBrowse link
G Zfp683 zinc finger protein 683 ISO (PMID:26179882) RGD PMID:26179882 NCBI chr 5:152,280,982...152,288,208 JBrowse link
cellular response to leptomycin B term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Id3 inhibitor of DNA binding 3, HLH protein ISO (MGI:5512805|PMID:23523789) RGD PMID:23523789 MGI:5512805 NCBI chr 5:154,489,603...154,491,172
Ensembl chr 5:154,489,590...154,491,223
JBrowse link
G Ranbp1 RAN binding protein 1 IDA RGD PMID:10421839 RGD:9834999 NCBI chr11:86,890,585...86,898,818
Ensembl chr11:86,890,585...86,898,818
JBrowse link
cellular response to oleic acid term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ass1 argininosuccinate synthase 1 IEP dexamethasone-stimulated hepatocytes RGD PMID:8985169 RGD:2303518 NCBI chr 3:10,327,411...10,375,847
Ensembl chr 3:10,327,414...10,375,826
JBrowse link
G Cps1 carbamoyl-phosphate synthase 1 IEP dexamethasone-stimulated hepatocytes RGD PMID:8985169 RGD:2303518 NCBI chr 9:74,113,437...74,236,274
Ensembl chr 9:74,124,016...74,236,274
JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 ISO (MGI:5293272|PMID:21680734) RGD PMID:21680734 MGI:5293272 NCBI chr 1:164,113,459...164,143,818
Ensembl chr 1:164,113,459...164,143,818
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20030
    response to stimulus 10583
      cellular response to stimulus 8920
        cellular response to chemical stimulus 3527
          cellular response to oxygen-containing compound 1583
            cellular response to fatty acid 49
              cellular response to arachidonic acid 0
              cellular response to butyrate 2
              cellular response to ionomycin 7
              cellular response to leptomycin B 2
              cellular response to leukotriene B4 0
              cellular response to linoleic acid 0
              cellular response to lipoic acid 0
              cellular response to oleic acid 3
              cellular response to palmitoleic acid 0
Path 2
Term Annotations click to browse term
  biological_process 20030
    response to stimulus 10583
      response to chemical 6343
        response to organic substance 3865
          response to lipid 1375
            response to fatty acid 99
              cellular response to fatty acid 49
                cellular response to arachidonic acid 0
                cellular response to butyrate 2
                cellular response to ionomycin 7
                cellular response to leptomycin B 2
                cellular response to leukotriene B4 0
                cellular response to linoleic acid 0
                cellular response to lipoic acid 0
                cellular response to oleic acid 3
                cellular response to palmitoleic acid 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.