ONTOLOGY REPORT - ANNOTATIONS


Term:ribonucleoprotein complex export from nucleus
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Accession:GO:0071426 term browser browse the term
Definition:The directed movement of a ribonucleoprotein complex from the nucleus to the cytoplasm.
Synonyms:exact_synonym: RNP export from nucleus;   ribonucleoprotein complex export from cell nucleus;   ribonucleoprotein complex nucleus export;   ribonucleoprotein complex transport from nucleus to cytoplasm


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mRNA export from nucleus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Alkbh5 alkB homolog 5, RNA demethylase JBrowse link 10 46,906,314 46,927,759 RGD:1624291
RGD:13792537
RGD:1600115
G Alyref Aly/REF export factor JBrowse link 10 109,768,593 109,774,639 RGD:1624291
G Chtop chromatin target of PRMT1 JBrowse link 2 189,887,850 189,900,079 RGD:1624291
G Da2-19 uncharacterized LOC302729 JBrowse link X 48,196,789 48,213,506 RGD:1600115
RGD:13792537
G Ddx25 DEAD-box helicase 25 JBrowse link 8 36,744,686 36,760,720 RGD:1600115
RGD:1624291
G Ddx39a DExD-box helicase 39A JBrowse link 19 24,846,530 24,854,886 RGD:1624291
RGD:1600115
G Ddx39b DExD-box helicase 39B JBrowse link 20 4,806,103 4,818,600 RGD:1624291
RGD:1600115
G Eif5a eukaryotic translation initiation factor 5A JBrowse link 10 56,527,075 56,531,615 RGD:1624291
G Fyttd1 forty-two-three domain containing 1 JBrowse link 11 71,113,931 71,136,694 RGD:1600115
RGD:13792537
RGD:1624291
G Gle1 GLE1 RNA export mediator JBrowse link 3 8,498,098 8,530,218 RGD:13792537
G Hhex hematopoietically expressed homeobox JBrowse link 1 256,101,994 256,107,581 RGD:1624291
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 JBrowse link 4 81,237,496 81,241,281 RGD:9685424
RGD:1624291
RGD:1600115
RGD:9685477
G LOC679894 similar to THO complex subunit 2 (Tho2) JBrowse link 14 6,561,962 6,601,906 RGD:13792537
G Mcm3ap minichromosome maintenance complex component 3 associated protein JBrowse link 20 12,879,304 12,917,069 RGD:13792537
G Ncbp1 nuclear cap binding protein subunit 1 JBrowse link 5 61,734,118 61,767,098 RGD:1600115
RGD:13792537
RGD:1624291
G Nup107 nucleoporin 107 JBrowse link 7 60,781,724 60,825,225 RGD:1624291
RGD:1600115
RGD:13792537
RGD:8553287
G Nup133 nucleoporin 133 JBrowse link 19 56,681,965 56,731,404 RGD:1624291
RGD:1600115
G Nup155 nucleoporin 155 JBrowse link 2 57,206,665 57,258,242 RGD:1624291
RGD:1600115
G Nup160 nucleoporin 160 JBrowse link 3 79,496,239 79,562,163 RGD:1624291
RGD:1600115
G Nup214 nucleoporin 214 JBrowse link 3
3
9,227,869
10,993,584
9,236,878
11,070,638
RGD:1624291
RGD:1600115
G Nup85 nucleoporin 85 JBrowse link 10 104,118,999 104,137,258 RGD:13792537
G Nup88 nucleoporin 88 JBrowse link 10 57,581,828 57,606,171 RGD:13792537
G Nxf1 nuclear RNA export factor 1 JBrowse link 1 224,957,535 224,970,728 RGD:1600115
RGD:1624291
G Nxf3 nuclear RNA export factor 3 JBrowse link X 106,562,957 106,587,487 RGD:1624291
G Nxf7 nuclear RNA export factor 7 JBrowse link X 106,049,075 106,066,334 RGD:1624291
G Poldip3 DNA polymerase delta interacting protein 3 JBrowse link 7 123,992,167 124,020,596 RGD:1600115
G Rae1 ribonucleic acid export 1 JBrowse link 3 171,012,984 171,030,392 RGD:1600115
G Rbm15b RNA binding motif protein 15B JBrowse link 8 115,618,242 115,623,068 RGD:1600115
RGD:1624291
G Sarnp SAP domain containing ribonucleoprotein JBrowse link 7 3,246,220 3,300,467 RGD:1624291
RGD:1600115
G Sem1 SEM1, 26S proteasome complex subunit JBrowse link 4 32,067,444 32,087,600 RGD:1600115
G Srsf3 serine and arginine rich splicing factor 3 JBrowse link 20 6,288,285 6,298,218 RGD:1600115
RGD:1624291
G Thoc1 THO complex 1 JBrowse link 18 1,142,540 1,177,084 RGD:1624291
G Thoc2 THO complex 2 JBrowse link X 128,153,824 128,268,327 RGD:1624291
RGD:13792537
G Thoc3 THO complex 3 JBrowse link 17 10,676,943 10,686,134 RGD:1624291
RGD:13792537
G Thoc5 THO complex 5 JBrowse link 14 85,138,219 85,171,729 RGD:1624291
RGD:13792537
G Thoc6 THO complex 6 JBrowse link 10 12,989,135 12,994,495 RGD:1624291
RGD:1600115
G Thoc7 THO complex 7 JBrowse link 15 12,569,235 12,584,101 RGD:1624291
RGD:13792537
G Ythdc1 YTH domain containing 1 JBrowse link 14 22,971,834 23,002,326 RGD:1600115
RGD:1624291
mRNA export from nucleus in response to heat stress term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Polr2d RNA polymerase II subunit D JBrowse link 18 24,570,762 24,577,894 RGD:13792537
G Tpr translocated promoter region, nuclear basket protein JBrowse link 13 67,611,685 67,672,833 RGD:1624291
RGD:1600115
poly(A)+ mRNA export from nucleus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Eny2 ENY2, transcription and export complex 2 subunit JBrowse link 7 83,348,656 83,358,430 RGD:13792537
RGD:1624291
G Gle1 GLE1 RNA export mediator JBrowse link 3 8,498,098 8,530,218 RGD:1600115
G Hhex hematopoietically expressed homeobox JBrowse link 1 256,101,994 256,107,581 RGD:1624291
RGD:1600115
G LOC500827 similar to hypothetical protein FLJ35821 JBrowse link 7 40,316,165 40,350,482 RGD:13792537
G Mcm3ap minichromosome maintenance complex component 3 associated protein JBrowse link 20 12,879,304 12,917,069 RGD:13792537
RGD:1624291
G Nup93 nucleoporin 93 JBrowse link 19 11,159,769 11,263,980 RGD:13792537
G Nxf1 nuclear RNA export factor 1 JBrowse link 1 224,957,535 224,970,728 RGD:1624291
RGD:13792537
RGD:1600115
G Nxf2 nuclear RNA export factor 2 JBrowse link X 105,772,718 105,793,324 RGD:13792537
G Nxf3 nuclear RNA export factor 3 JBrowse link X 106,562,957 106,587,487 RGD:1624291
RGD:13792537
G Nxf7 nuclear RNA export factor 7 JBrowse link X 106,049,075 106,066,334 RGD:1624291
RGD:13792537
G Pabpn1 poly(A) binding protein, nuclear 1 JBrowse link 15 33,555,640 33,560,251 RGD:1624291
RGD:1600115
G Pcid2 PCI domain containing 2 JBrowse link 16 81,757,582 81,783,047 RGD:13792537
G Poldip3 DNA polymerase delta interacting protein 3 JBrowse link 7 123,992,167 124,020,596 RGD:1624291
RGD:1600115
G Thoc2 THO complex 2 JBrowse link X 128,153,824 128,268,327 RGD:1624291
G Zc3h11a zinc finger CCCH-type containing 11A JBrowse link 13 50,196,042 50,234,862 RGD:1624291
RGD:13792537
G Zc3h3 zinc finger CCCH type containing 3 JBrowse link 7 116,787,762 116,872,536 RGD:1624291
RGD:13792537
positive regulation of ribosomal small subunit export from nucleus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Riok2 RIO kinase 2 JBrowse link 1 59,130,008 59,146,457 RGD:1624291
RGD:1600115
regulation of mRNA export from nucleus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akap8l A-kinase anchoring protein 8 like JBrowse link 7 14,340,168 14,369,835 RGD:1624291
RGD:1600115
G Iws1 interacts with SUPT6H, CTD assembly factor 1 JBrowse link 18 24,849,508 24,891,339 RGD:1600115
RGD:13792537
RGD:1624291
G Setd2 SET domain containing 2, histone lysine methyltransferase JBrowse link 8 118,802,478 118,888,224 RGD:1624291
RGD:1600115
G Supt6h SPT6 homolog, histone chaperone and transcription elongation factor JBrowse link 10 65,470,470 65,507,581 RGD:1624291
RGD:1600115
G Thoc2 THO complex 2 JBrowse link X 128,153,824 128,268,327 RGD:1624291
RGD:1600115
G Thoc5 THO complex 5 JBrowse link 14 85,138,219 85,171,729 RGD:1624291
G Tpr translocated promoter region, nuclear basket protein JBrowse link 13 67,611,685 67,672,833 RGD:1624291
G Zc3h3 zinc finger CCCH type containing 3 JBrowse link 7 116,787,762 116,872,536 RGD:1624291
ribosomal large subunit export from nucleus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nmd3 NMD3 ribosome export adaptor JBrowse link 2 166,402,838 166,428,331 RGD:1624291
RGD:13792537
G Npm1 nucleophosmin 1 JBrowse link 10 18,080,949 18,091,062 RGD:1624291
RGD:13792537
G Nup88 nucleoporin 88 JBrowse link 10 57,581,828 57,606,171 RGD:13792537
G Ran RAN, member RAS oncogene family JBrowse link 12 31,319,556 31,324,105 RGD:1624291
RGD:1600115
G Rrs1 ribosome biogenesis regulator 1 homolog JBrowse link 5 9,430,710 9,432,343 RGD:13792537
G Sdad1 SDA1 domain containing 1 JBrowse link 14 17,247,381 17,274,228 RGD:1600115
G Xpo1 exportin 1 JBrowse link 14 108,007,421 108,049,088 RGD:1624291
RGD:13792537
G Zfp593 zinc finger protein 593 JBrowse link 5 152,462,522 152,464,850 RGD:13792537
ribosomal small subunit export from nucleus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ltv1 LTV1 ribosome biogenesis factor JBrowse link 1 7,323,043 7,335,766 RGD:13792537
G Npm1 nucleophosmin 1 JBrowse link 10 18,080,949 18,091,062 RGD:1624291
RGD:13792537
G Nup88 nucleoporin 88 JBrowse link 10 57,581,828 57,606,171 RGD:13792537
G Ran RAN, member RAS oncogene family JBrowse link 12 31,319,556 31,324,105 RGD:1624291
RGD:1600115
G Rps15 ribosomal protein S15 JBrowse link 7 12,282,134 12,283,573 RGD:1624291
G Xpo1 exportin 1 JBrowse link 14 108,007,421 108,049,088 RGD:1624291
RGD:13792537
ribosomal subunit export from nucleus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abce1 ATP binding cassette subfamily E member 1 JBrowse link 19 31,867,960 31,892,863 RGD:13792537
G Eif6 eukaryotic translation initiation factor 6 JBrowse link 3 151,356,867 151,363,201 RGD:1600115
RGD:13792537
G Xpo1 exportin 1 JBrowse link 14 108,007,421 108,049,088 RGD:1624291
rRNA export from nucleus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Npm1 nucleophosmin 1 JBrowse link 10 18,080,949 18,091,062 RGD:1624291
RGD:13792537
G Rpsa ribosomal protein SA JBrowse link 8 128,806,053 128,809,987 RGD:13792537
G Tsc1 TSC complex subunit 1 JBrowse link 3 7,219,955 7,269,063 RGD:1624291
RGD:1600115
tRNA export from nucleus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nol6 nucleolar protein 6 JBrowse link 5 57,444,448 57,473,803 RGD:13792537
G Ssb small RNA binding exonuclease protection factor La JBrowse link 3 56,092,425 56,102,008 RGD:1624291
G Xpot exportin for tRNA JBrowse link 7 63,688,646 63,728,988 RGD:1624291
tRNA re-export from nucleus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Xpot exportin for tRNA JBrowse link 7 63,688,646 63,728,988 RGD:13792537

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17895
    localization 5951
      cellular localization 2643
        ribonucleoprotein complex localization 70
          ribonucleoprotein complex export from nucleus 69
            mRNA-containing ribonucleoprotein complex export from nucleus + 52
            pre-miRNA-containing ribonucleoprotein complex export from nucleus 0
            rRNA-containing ribonucleoprotein complex export from nucleus + 15
            snRNA-containing ribonucleoprotein complex export from nucleus 0
            tRNA-containing ribonucleoprotein complex export from nucleus + 3
Path 2
Term Annotations click to browse term
  biological_process 17895
    localization 5951
      establishment of localization 4561
        transport 4425
          nitrogen compound transport 2156
            amide transport 1836
              peptide transport 1805
                protein transport 1751
                  intracellular protein transport 963
                    protein export from nucleus 126
                      ribonucleoprotein complex export from nucleus 69
                        mRNA-containing ribonucleoprotein complex export from nucleus + 52
                        pre-miRNA-containing ribonucleoprotein complex export from nucleus 0
                        rRNA-containing ribonucleoprotein complex export from nucleus + 15
                        snRNA-containing ribonucleoprotein complex export from nucleus 0
                        tRNA-containing ribonucleoprotein complex export from nucleus + 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.