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ONTOLOGY REPORT - ANNOTATIONS


Term:invadopodium
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Accession:GO:0071437 term browser browse the term
Definition:A cell projection that emerges from the ECM-facing surface of a cell, is enriched in actin and associated cytoskeletal proteins, and displays localized proteolytic activity toward the substrate.


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invadopodium term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr2 actin related protein 2 IDA RGD PMID:19373774 RGD:11534988 NCBI chr14:104,338,486...104,375,840
Ensembl chr14:104,340,434...104,375,649
JBrowse link
G Afap1l1 actin filament associated protein 1-like 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr18:57,052,659...57,114,589
Ensembl chr18:57,053,947...57,114,545
JBrowse link
G Arpc2 actin related protein 2/3 complex, subunit 2 IDA RGD PMID:15684033 RGD:11575050 NCBI chr 9:81,518,163...81,548,871
Ensembl chr 9:81,518,176...81,548,871
JBrowse link
G Ezr ezrin ISO
ISS
(PMID:25486435)
GO_REF:0000024
RGD
UniProt
PMID:25486435 GO_REF:0000024 NCBI chr 1:47,287,872...47,331,412
Ensembl chr 1:47,287,874...47,331,412
JBrowse link
G Fscn1 fascin actin-bundling protein 1 ISO
IEA
ISS
(PMID:20137952)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20137952 GO_REF:0000024, GO_REF:0000107 NCBI chr12:13,655,459...13,668,595
Ensembl chr12:13,656,554...13,668,515
JBrowse link
G Msn moesin IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:25486435)
Ensembl
UniProt
RGD
PMID:25486435 GO_REF:0000024, GO_REF:0000107 NCBI chr  X:65,226,834...65,294,192
Ensembl chr  X:65,226,748...65,295,810
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 ISO
ISS
(PMID:25766321)
GO_REF:0000024
RGD
UniProt
PMID:25766321 GO_REF:0000024 NCBI chr 1:162,768,156...162,883,356
Ensembl chr 1:162,768,156...162,883,355
JBrowse link
G Pdpn podoplanin ISO
IBA
ISS
(PMID:25486435)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:25486435, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 5:161,947,137...161,981,441
Ensembl chr 5:161,947,137...161,981,441
JBrowse link
G Rufy3 RUN and FYVE domain containing 3 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:25766321)
Ensembl
UniProt
RGD
PMID:25766321 GO_REF:0000024, GO_REF:0000107 NCBI chr14:21,058,575...21,144,775
Ensembl chr14:21,058,595...21,128,505
JBrowse link
G Washc1 WASH complex subunit 1 ISO (PMID:24344185) RGD PMID:24344185 NCBI chr 9:113,918,914...113,936,861
Ensembl chr 9:113,918,858...113,936,860
JBrowse link
invadopodium membrane term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpp4 dipeptidylpeptidase 4 ISO
IEA
ISS
(PMID:16651416)
GO_REF:0000044
GO_REF:0000024
RGD
UniProt
PMID:16651416 GO_REF:0000024, GO_REF:0000044 NCBI chr 3:48,291,055...48,372,672
Ensembl chr 3:48,291,055...48,372,672
JBrowse link
G Fap fibroblast activation protein, alpha ISO (PMID:10455171) RGD PMID:10455171 NCBI chr 3:48,467,781...48,536,242
Ensembl chr 3:48,467,781...48,536,235
JBrowse link
G Itga3 integrin subunit alpha 3 ISO (PMID:10455171) RGD PMID:10455171 NCBI chr10:82,855,841...82,887,755
Ensembl chr10:82,855,613...82,887,497
JBrowse link
G Itgb1 integrin subunit beta 1 ISO
IEA
ISS
(PMID:10455171)
GO_REF:0000044
GO_REF:0000024
RGD
UniProt
PMID:10455171 GO_REF:0000024, GO_REF:0000044 NCBI chr19:61,677,512...61,725,537
Ensembl chr19:61,677,542...61,725,535
JBrowse link
G Nox1 NADPH oxidase 1 IEA
ISO
GO_REF:0000107
(PMID:19755710)
Ensembl
RGD
PMID:19755710 GO_REF:0000107 NCBI chr  X:104,909,328...104,932,508
Ensembl chr  X:104,909,326...104,932,508
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20609
    cellular anatomical entity 20358
      cell projection 2549
        plasma membrane bounded cell projection 2477
          invadopodium 15
            invadopodium membrane 5
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.