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ONTOLOGY REPORT - ANNOTATIONS


Term:ectodermal placode development
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Accession:GO:0071696 term browser browse the term
Definition:The progression of an ectodermal placode over time from its initial formation until its mature state. An ectodermal placode is a thickening of the ectoderm that is the primordium of many structures derived from the ectoderm.


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hair follicle placode formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 ISO (MGI:4355652|PMID:19619491)
(MGI:1934694|PMID:11371349)
MGI PMID:11371349, PMID:19619491 MGI:1934694, MGI:4355652 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030
JBrowse link
G EDA ectodysplasin A ISO (MGI:4355652|PMID:19619491) MGI PMID:19619491 MGI:4355652 NCBI chr  X:58,881,660...59,308,451 JBrowse link
G HDAC1 histone deacetylase 1 ISO (MGI:4889029|PMID:21093383) BHF-UCL PMID:21093383 MGI:4889029 NCBI chr 1:31,578,373...31,619,970
Ensembl chr 1:32,585,791...32,626,410
JBrowse link
G HDAC2 histone deacetylase 2 ISO (MGI:4889029|PMID:21093383) BHF-UCL PMID:21093383 MGI:4889029 NCBI chr 6:111,731,139...111,761,826
Ensembl chr 6:115,802,367...115,833,004
JBrowse link
G LOC100990650 guanine nucleotide-binding protein G(s) subunit alpha ISO (PMID:12719376) UniProtKB PMID:12719376 NCBI chr20:55,190,607...55,262,245 JBrowse link
mammary placode formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP6 LDL receptor related protein 6 ISO (MGI:3849913|PMID:19503830) MGI PMID:19503830 MGI:3849913 NCBI chr12:12,121,411...12,288,590
Ensembl chr12:12,508,108...12,657,973
JBrowse link
G NRG3 neuregulin 3 ISO (MGI:1353819|PMID:10723730) MGI PMID:10723730 MGI:1353819 NCBI chr10:78,267,693...79,384,895
Ensembl chr10:81,862,036...82,973,334
JBrowse link
G TBX2 T-box transcription factor 2 ISO (MGI:3608166|PMID:16222716) MGI PMID:16222716 MGI:3608166 NCBI chr17:55,501,932...55,511,537
Ensembl chr17:60,622,098...60,630,189
JBrowse link
G TBX3 T-box transcription factor 3 ISO (MGI:3695659|PMID:17071745)
(MGI:3608166|PMID:16222716)
MGI PMID:16222716, PMID:17071745 MGI:3608166, MGI:3695659 NCBI chr12:112,240,050...112,254,299
Ensembl chr12:115,620,002...115,631,316
JBrowse link
negative regulation of hair follicle placode formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DKK4 dickkopf WNT signaling pathway inhibitor 4 ISO (MGI:3805070|PMID:18508042) MGI PMID:18508042 MGI:3805070 NCBI chr 8:41,618,173...41,638,550
Ensembl chr 8:39,062,711...39,082,575
JBrowse link
olfactory placode formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POU2F1 POU class 2 homeobox 1 ISO (MGI:3701404|PMID:17140559) MGI PMID:17140559 MGI:3701404 NCBI chr 1:142,653,296...142,860,572
Ensembl chr 1:146,439,581...146,633,921
JBrowse link
G SIX1 SIX homeobox 1 ISO (MGI:3833798|PMID:19027001) UniProt PMID:19027001 MGI:3833798 NCBI chr14:41,250,512...41,256,567
Ensembl chr14:59,515,324...59,527,494
JBrowse link
G SIX4 SIX homeobox 4 ISO (MGI:3833798|PMID:19027001) UniProt PMID:19027001 MGI:3833798 NCBI chr14:41,316,169...41,332,160
Ensembl chr14:59,580,587...59,594,014
JBrowse link
G SOX2 SRY-box transcription factor 2 ISO (MGI:3701404|PMID:17140559) MGI PMID:17140559 MGI:3701404 NCBI chr 3:178,744,881...178,747,392
Ensembl chr 3:186,922,705...186,923,662
JBrowse link
optic placode formation involved in camera-type eye formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FRS2 fibroblast growth factor receptor substrate 2 ISO (MGI:3513737|PMID:15569927) MGI PMID:15569927 MGI:3513737 NCBI chr12:66,992,207...67,107,313
Ensembl chr12:69,829,435...69,878,293
JBrowse link
G PROX1 prospero homeobox 1 ISO (PMID:11850194) BHF-UCL PMID:11850194 NCBI chr 1:189,556,124...189,609,297
Ensembl chr 1:194,412,980...194,460,763
JBrowse link
otic placode development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NRP1 neuropilin 1 ISO (MGI:3788968|PMID:18356247) ParkinsonsUK-UCL PMID:18356247 MGI:3788968 NCBI chr10:33,298,918...33,456,466
Ensembl chr10:33,883,173...34,039,648
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12566
    developmental process 5839
      anatomical structure development 5452
        ectodermal placode development 17
          ectodermal placode morphogenesis + 16
          olfactory placode development + 4
          otic placode development 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.