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ONTOLOGY REPORT - ANNOTATIONS


Term:ectodermal placode development
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Accession:GO:0071696 term browser browse the term
Definition:The progression of an ectodermal placode over time from its initial formation until its mature state. An ectodermal placode is a thickening of the ectoderm that is the primordium of many structures derived from the ectoderm.


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hair follicle placode formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:41,199,422...41,240,445
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G EDA ectodysplasin A IEA Ensembl GO_REF:0000107 NCBI chr  X:69,616,086...70,039,472
Ensembl chr  X:69,616,067...70,039,472
JBrowse link
G GNAS GNAS complex locus IMP
IDA
(PMID:12719376) UniProtKB PMID:12719376 NCBI chr20:58,839,681...58,911,192
Ensembl chr20:58,839,718...58,911,192
JBrowse link
G HDAC1 histone deacetylase 1 ISS BHF-UCL GO_REF:0000024 NCBI chr 1:32,292,083...32,333,628
Ensembl chr 1:32,292,083...32,333,635
JBrowse link
G HDAC2 histone deacetylase 2 ISS (PMID:21093383) BHF-UCL PMID:21093383 NCBI chr 6:113,933,028...113,971,148
Ensembl chr 6:113,933,028...114,011,308
JBrowse link
mammary placode formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP6 LDL receptor related protein 6 ISO (MGI:3849913|PMID:19503830) MGI PMID:19503830 MGI:3849913 NCBI chr12:12,116,025...12,267,044
Ensembl chr12:12,116,025...12,267,044
JBrowse link
G NRG3 neuregulin 3 IEA Ensembl GO_REF:0000107 NCBI chr10:81,875,190...82,989,979
Ensembl chr10:81,875,194...82,987,179
JBrowse link
G TBX2 T-box transcription factor 2 IEA Ensembl GO_REF:0000107 NCBI chr17:61,399,843...61,409,466
Ensembl chr17:61,399,843...61,409,466
JBrowse link
G TBX3 T-box transcription factor 3 IEA Ensembl GO_REF:0000107 NCBI chr12:114,670,255...114,684,175
Ensembl chr12:114,670,255...114,684,175
JBrowse link
negative regulation of hair follicle placode formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DKK4 dickkopf WNT signaling pathway inhibitor 4 IEA Ensembl GO_REF:0000107 NCBI chr 8:42,373,194...42,391,322
Ensembl chr 8:42,374,063...42,377,229
JBrowse link
olfactory placode formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POU2F1 POU class 2 homeobox 1 ISO (MGI:3701404|PMID:17140559) MGI PMID:17140559 MGI:3701404 NCBI chr 1:167,220,878...167,427,345
Ensembl chr 1:167,220,876...167,427,345
JBrowse link
G PROX1 prospero homeobox 1 ISS (PMID:11789987) BHF-UCL PMID:11789987 NCBI chr 1:213,983,239...214,041,510
Ensembl chr 1:213,983,181...214,041,510
JBrowse link
G SIX1 SIX homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr14:60,643,421...60,649,489
Ensembl chr14:60,643,421...60,658,259
JBrowse link
G SIX4 SIX homeobox 4 ISS UniProtKB GO_REF:0000024 NCBI chr14:60,709,539...60,724,351
Ensembl chr14:60,709,539...60,724,351
JBrowse link
G SOX2 SRY-box transcription factor 2 ISO (MGI:3701404|PMID:17140559) MGI PMID:17140559 MGI:3701404 NCBI chr 3:181,711,925...181,714,436
Ensembl chr 3:181,711,925...181,714,436
JBrowse link
optic placode formation involved in camera-type eye formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FRS2 fibroblast growth factor receptor substrate 2 IEA Ensembl GO_REF:0000107 NCBI chr12:69,470,371...69,579,793
Ensembl chr12:69,470,349...69,579,789
JBrowse link
G PROX1 prospero homeobox 1 ISS (PMID:11850194) BHF-UCL PMID:11850194 NCBI chr 1:213,983,239...214,041,510
Ensembl chr 1:213,983,181...214,041,510
JBrowse link
otic placode development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NRP1 neuropilin 1 IEA Ensembl GO_REF:0000107 NCBI chr10:33,177,493...33,334,667
Ensembl chr10:33,177,492...33,336,262
JBrowse link
otic placode formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PROX1 prospero homeobox 1 ISS (PMID:11789987) BHF-UCL PMID:11789987 NCBI chr 1:213,983,239...214,041,510
Ensembl chr 1:213,983,181...214,041,510
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18673
    developmental process 7467
      anatomical structure development 6874
        ectodermal placode development 17
          ectodermal placode morphogenesis + 16
          olfactory placode development + 5
          otic placode development 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.