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ONTOLOGY REPORT - ANNOTATIONS


Term:transcriptional activation by promoter-enhancer looping
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Accession:GO:0071733 term browser browse the term
Definition:The formation and maintenance of DNA loops that juxtapose the promoter and enhancer regions of RNA polymerase II-transcribed genes and activate transcription from an RNA polymerase II promoter.
Synonyms:related_synonym: long-range enhancer-promoter communication


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transcriptional activation by promoter-enhancer looping term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata1 GATA binding protein 1 ISO (MGI:MGI:5284796|PMID:15644435) RGD PMID:15644435 MGI:MGI:5284796 NCBI chr  X:15,273,937...15,281,759
Ensembl chr  X:15,378,789...15,382,066
JBrowse link
G Nipbl NIPBL, cohesin loading factor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:57,508,830...57,676,197
Ensembl chr 2:57,509,428...57,600,820
JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 ISO (PMID:23637611) RGD PMID:23637611 NCBI chr 1:101,413,766...101,426,970
Ensembl chr 1:101,413,766...101,426,852
JBrowse link
G Zfpm1 zinc finger protein, multitype 1 ISO (MGI:MGI:5284796|PMID:15644435) RGD PMID:15644435 MGI:MGI:5284796 NCBI chr19:55,094,585...55,150,994
Ensembl chr19:55,094,585...55,150,686
JBrowse link

Term paths to the root
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Term Annotations click to browse term
  biological_process 20014
    cellular process 18788
      cellular component organization or biogenesis 6766
        cellular component organization 6510
          chromatin organization 847
            gene looping 4
              transcriptional activation by promoter-enhancer looping 4
Path 2
Term Annotations click to browse term
  biological_process 20014
    metabolic process 12256
      cellular metabolic process 11065
        cellular aromatic compound metabolic process 5708
          nucleobase-containing compound metabolic process 5483
            nucleic acid metabolic process 4980
              RNA metabolic process 4470
                regulation of RNA metabolic process 3616
                  regulation of RNA biosynthetic process 3343
                    regulation of nucleic acid-templated transcription 3338
                      regulation of transcription, DNA-templated 3289
                        positive regulation of transcription, DNA-templated 1698
                          positive regulation of transcription by RNA polymerase II 1390
                            transcriptional activation by promoter-enhancer looping 4
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.