Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:transcriptional activation by promoter-enhancer looping
go back to main search page
Accession:GO:0071733 term browser browse the term
Definition:The formation and maintenance of DNA loops that juxtapose the promoter and enhancer regions of RNA polymerase II-transcribed genes and activate transcription from an RNA polymerase II promoter.
Synonyms:related_synonym: long-range enhancer-promoter communication


show annotations for term's descendants           Sort by:
 
transcriptional activation by promoter-enhancer looping term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA1 GATA binding protein 1 IEA Ensembl GO_REF:0000107 NCBI chr  X:42,898,431...42,905,939
Ensembl chr  X:42,898,442...42,905,976
JBrowse link
G NIPBL NIPBL cohesin loading factor IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:22,152,455...22,364,373
Ensembl chr16:22,152,501...22,363,847
JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 IEA Ensembl GO_REF:0000107 NCBI chr 6:54,250,494...54,263,492
Ensembl chr 6:54,250,515...54,266,893
JBrowse link
G ZFPM1 zinc finger protein, FOG family member 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:1,091,158...1,153,972
Ensembl chr 6:1,091,259...1,108,717
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16524
    cellular process 15756
      cellular component organization or biogenesis 5964
        cellular component organization 5795
          chromatin organization 699
            gene looping 4
              transcriptional activation by promoter-enhancer looping 4
Path 2
Term Annotations click to browse term
  biological_process 16524
    metabolic process 10565
      cellular metabolic process 9560
        cellular aromatic compound metabolic process 5101
          nucleobase-containing compound metabolic process 4902
            nucleic acid metabolic process 4482
              RNA metabolic process 4015
                regulation of RNA metabolic process 3311
                  regulation of RNA biosynthetic process 3063
                    regulation of nucleic acid-templated transcription 3058
                      regulation of transcription, DNA-templated 3008
                        positive regulation of transcription, DNA-templated 1588
                          positive regulation of transcription by RNA polymerase II 1301
                            transcriptional activation by promoter-enhancer looping 4
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.