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ONTOLOGY REPORT - ANNOTATIONS


Term:protein transmembrane transport
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Accession:GO:0071806 term browser browse the term
Definition:The process in which a protein is transported across a membrane.
Comment:Note that this term is not intended for use in annotating lateral movement within membranes.
Synonyms:exact_synonym: protein membrane transport


show annotations for term's descendants       view all columns           Sort by:
 
protein transmembrane transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07028668.1 RGD:1600115
G AABR07041141.1 RGD:1600115
G AABR07048012.1 RGD:1600115
G AABR07048013.1 RGD:1600115
G Bloc1s3 biogenesis of lysosomal organelles complex-1, subunit 3 JBrowse link 1 80,414,766 80,417,385 RGD:1600115
G Gpihbp1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 JBrowse link 7 116,632,496 116,635,543 RGD:1600115
G LOC499136 LRRGT00021 JBrowse link 1 97,783,806 97,785,490 RGD:1600115
G Sec61g Sec61 translocon gamma subunit JBrowse link 14 99,774,589 99,780,964 RGD:1600115
G Timm22 translocase of inner mitochondrial membrane 22 JBrowse link 10 64,556,064 64,563,822 RGD:1600115
G Tomm22 translocase of outer mitochondrial membrane 22 JBrowse link 7 120,901,934 120,903,684 RGD:1600115
chaperone-mediated protein transport involved in chaperone-mediated autophagy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07011951.1 RGD:13792537
G AABR07033324.1 RGD:13792537
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 JBrowse link 6 135,107,262 135,112,793 RGD:10412301
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 JBrowse link 9 17,817,791 17,823,163 RGD:10412301
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link 8 44,989,401 44,993,261 RGD:10412301
RGD:13792537
G LOC103692716 heat shock protein HSP 90-alpha JBrowse link 6 135,044,833 135,050,417 RGD:10412301
G LOC680121 similar to heat shock protein 8 JBrowse link 11 13,499,168 13,501,271 RGD:13792537
intracellular protein transmembrane transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akt2 AKT serine/threonine kinase 2 JBrowse link 1 84,400,939 84,451,223 RGD:1600115
RGD:1624291
G Bcr BCR activator of RhoGEF and GTPase JBrowse link 20 14,421,250 14,546,406 RGD:1624291
RGD:1600115
G C2cd5 C2 calcium-dependent domain containing 5 JBrowse link 4 177,245,868 177,331,910 RGD:1624291
RGD:1600115
G Rtn2 reticulon 2 JBrowse link 1 80,195,594 80,208,449 RGD:1624291
RGD:1600115
posttranslational protein targeting to membrane, translocation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hspa5 heat shock protein family A (Hsp70) member 5 JBrowse link 3 13,838,304 13,842,763 RGD:1600115
RGD:1624291
G Sec61a1 Sec61 translocon alpha 1 subunit JBrowse link 4 120,453,577 120,467,932 RGD:1600115
RGD:1624291
G Sec61b Sec61 translocon beta subunit JBrowse link 5 63,192,322 63,200,532 RGD:13792537
G Sec62 SEC62 homolog, preprotein translocation factor JBrowse link 2 116,188,736 116,225,510 RGD:13792537
RGD:1624291
G Sec63 SEC63 homolog, protein translocation regulator JBrowse link 20 47,494,270 47,563,222 RGD:1600115
RGD:1624291
protein import into mitochondrial intermembrane space term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07014739.1 RGD:13792537
G AABR07067813.1 RGD:1600115
G Chchd4 coiled-coil-helix-coiled-coil-helix domain containing 4 JBrowse link 4 123,108,924 123,118,186 RGD:1600115
RGD:13792537
RGD:1624291
G Hspd1 heat shock protein family D (Hsp60) member 1 JBrowse link 9 61,680,529 61,691,202 RGD:13792537
G LOC100361898 coiled-coil-helix-coiled-coil-helix domain containing 4 JBrowse link 1 248,402,889 248,403,604 RGD:1600115
RGD:13792537
protein import into mitochondrial matrix term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AC128303.1 RGD:13792537
G Dnajc15 DnaJ heat shock protein family (Hsp40) member C15 JBrowse link 15 59,990,131 60,056,710 RGD:13792537
G Dnajc19 DnaJ heat shock protein family (Hsp40) member C19 JBrowse link 2 120,503,093 120,531,782 RGD:13792537
G Dnlz DNL-type zinc finger JBrowse link 3 3,796,480 3,798,467 RGD:13792537
G Grpel1 GrpE-like 1, mitochondrial JBrowse link 14 79,458,951 79,464,782 RGD:13792537
G Grpel2 GrpE-like 2, mitochondrial JBrowse link 18 57,037,995 57,050,234 RGD:13792537
G LOC100362432 mitochondrial import inner membrane translocase subunit Tim23-like JBrowse link 3 82,970,785 82,971,887 RGD:13792537
G LOC100910944 reactive oxygen species modulator 1-like JBrowse link 3 152,222,703 152,224,314 RGD:13792537
G LOC100911130 mitochondrial import inner membrane translocase subunit Tim17-B-like JBrowse link X 15,340,557 15,347,682 RGD:13792537
G Magmas-ps1 mitochondria-associated protein involved in granulocyte-macrophage colony-stimulating factor signal transduction, pseudogene 1 JBrowse link 10 91,752,860 91,753,380 RGD:13792537
G Pam16 presequence translocase associated motor 16 JBrowse link 10 11,146,359 11,153,936 RGD:1624291
RGD:13792537
G Romo1 reactive oxygen species modulator 1 JBrowse link 3 151,688,213 151,689,813 RGD:13792537
G Timm17a translocase of inner mitochondrial membrane 17A JBrowse link 13 52,124,641 52,136,127 RGD:13792537
G Timm17b translocase of inner mitochondrial membrane 17b JBrowse link X 15,441,369 15,448,452 RGD:13792537
G Timm21 translocase of inner mitochondrial membrane 21 JBrowse link 18 81,803,165 81,807,627 RGD:1624291
RGD:13792537
RGD:1600115
G Timm23 translocase of inner mitochondrial membrane 23 JBrowse link 16 8,324,038 8,350,067 RGD:13792537
G Timm44 translocase of inner mitochondrial membrane 44 JBrowse link 12 2,517,006 2,533,707 RGD:1600115
RGD:13792537
G Timm50 translocase of inner mitochondrial membrane 50 JBrowse link 1 85,470,810 85,480,813 RGD:13792537
G Tomm20 translocase of outer mitochondrial membrane 20 JBrowse link 19 59,863,421 59,873,411 RGD:13792537
G Tomm40 translocase of outer mitochondrial membrane 40 JBrowse link 1 80,617,749 80,630,253 RGD:1600115
RGD:13792537
G Tomm40l translocase of outer mitochondrial membrane 40 like JBrowse link 13 89,590,076 89,595,287 RGD:13792537
G Tomm7 translocase of outer mitochondrial membrane 7 JBrowse link 4 7,835,949 7,842,790 RGD:1600115
protein import into peroxisome matrix term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC108348326 peroxisome assembly protein 12 RGD:13792537
G Lonp2 lon peptidase 2, peroxisomal JBrowse link 19 21,400,736 21,492,634 RGD:1600115
G Pex1 peroxisomal biogenesis factor 1 JBrowse link 4 27,659,376 27,698,037 RGD:1624291
RGD:13792537
G Pex10 peroxisomal biogenesis factor 10 JBrowse link 5 172,469,978 172,475,144 RGD:1624291
RGD:13792537
G Pex12 peroxisomal biogenesis factor 12 JBrowse link 10 70,512,785 70,516,494 RGD:1624291
RGD:13792537
G Pex14 peroxisomal biogenesis factor 14 JBrowse link 5 165,782,895 165,918,445 RGD:1624291
G Pex16 peroxisomal biogenesis factor 16 JBrowse link 3 81,283,137 81,292,575 RGD:1624291
RGD:1600115
G Pex2 peroxisomal biogenesis factor 2 JBrowse link 2 98,251,756 98,269,185 RGD:1624291
RGD:1600115
G Pex26 peroxisomal biogenesis factor 26 JBrowse link 4 153,747,715 153,760,446 RGD:1624291
RGD:13792537
G Pex5 peroxisomal biogenesis factor 5 JBrowse link 4 156,983,914 157,009,675 RGD:1624291
G Pex6 peroxisomal biogenesis factor 6 JBrowse link 9 16,568,743 16,580,900 RGD:13792537
G Pex7 peroxisomal biogenesis factor 7 JBrowse link 1 15,311,768 15,374,702 RGD:1624291
RGD:1600115
protein import into peroxisome matrix, docking term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC103690024 peroxisomal targeting signal 1 receptor-like JBrowse link 4 156,403,016 156,428,237 RGD:13792537
G Pex13 peroxisomal biogenesis factor 13 JBrowse link 14 108,394,299 108,411,994 RGD:1624291
RGD:13792537
G Pex14 peroxisomal biogenesis factor 14 JBrowse link 5 165,782,895 165,918,445 RGD:13792537
G Pex5 peroxisomal biogenesis factor 5 JBrowse link 4 156,983,914 157,009,675 RGD:1624291
RGD:13792537
G Pex5l peroxisomal biogenesis factor 5-like JBrowse link 2 119,330,330 119,405,809 RGD:13792537
protein import into peroxisome matrix, substrate release term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pex14 peroxisomal biogenesis factor 14 JBrowse link 5 165,782,895 165,918,445 RGD:1624291
RGD:1600115
protein import into peroxisome matrix, translocation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pex14 peroxisomal biogenesis factor 14 JBrowse link 5 165,782,895 165,918,445 RGD:1624291
RGD:1600115
G Pex5 peroxisomal biogenesis factor 5 JBrowse link 4 156,983,914 157,009,675 RGD:1624291
G Pex6 peroxisomal biogenesis factor 6 JBrowse link 9 16,568,743 16,580,900 RGD:1624291
RGD:1600115
protein transmembrane import into intracellular organelle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link 8 44,989,401 44,993,261 RGD:10059368
SRP-dependent cotranslational protein targeting to membrane, translocation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sec61a1 Sec61 translocon alpha 1 subunit JBrowse link 4 120,453,577 120,467,932 RGD:13792537
G Sec61a2 Sec61 translocon alpha 2 subunit JBrowse link 17 76,358,947 76,385,860 RGD:13792537
G Sec61b Sec61 translocon beta subunit JBrowse link 5 63,192,322 63,200,532 RGD:13792537
G Srp54a signal recognition particle 54A JBrowse link 6 75,996,629 76,035,768 RGD:1624291
RGD:13792537
G Tram1 translocation associated membrane protein 1 JBrowse link 5 5,215,196 5,297,337 RGD:1624291
RGD:1600115
G Tram1l1 translocation associated membrane protein 1-like 1 JBrowse link 2 228,544,418 228,546,599 RGD:1600115
G Tram2 translocation associated membrane protein 2 JBrowse link 9 27,117,861 27,192,166 RGD:1600115
G Zfand2b zinc finger AN1-type containing 2B JBrowse link 9 82,370,887 82,373,843 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19245
    localization 6273
      establishment of localization 4844
        establishment of protein localization 1929
          protein transport 1822
            protein transmembrane transport 74
              chaperone-mediated protein transport involved in chaperone-mediated autophagy 7
              intracellular protein transmembrane transport + 57
              protein secretion by the type I secretion system 0
              protein secretion by the type III secretion system 0
              protein secretion by the type IV secretion system 0
              protein secretion by the type VI secretion system 0
              protein secretion by the type VII secretion system 0
              protein transmembrane import into intracellular organelle + 43
              protein transport across the cell outer membrane + 0
              protein transport by the Sec complex 0
              protein transport by the Tat complex 0
Path 2
Term Annotations click to browse term
  biological_process 19245
    localization 6273
      establishment of localization 4844
        transport 4705
          nitrogen compound transport 2235
            amide transport 1913
              peptide transport 1880
                protein transport 1822
                  protein transmembrane transport 74
                    chaperone-mediated protein transport involved in chaperone-mediated autophagy 7
                    intracellular protein transmembrane transport + 57
                    protein secretion by the type I secretion system 0
                    protein secretion by the type III secretion system 0
                    protein secretion by the type IV secretion system 0
                    protein secretion by the type VI secretion system 0
                    protein secretion by the type VII secretion system 0
                    protein transmembrane import into intracellular organelle + 43
                    protein transport across the cell outer membrane + 0
                    protein transport by the Sec complex 0
                    protein transport by the Tat complex 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.