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ONTOLOGY REPORT - ANNOTATIONS


Term:lipoprotein particle binding
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Accession:GO:0071813 term browser browse the term
Definition:Interacting selectively and non-covalently with a lipoprotein particle. A lipoprotein particle, also known as a lipoprotein, is a clathrate complex consisting of a lipid enwrapped in a protein host without covalent binding in such a way that the complex has a hydrophilic outer surface consisting of all the protein and the polar ends of any phospholipids.
Synonyms:exact_synonym: plasma lipoprotein particle binding
 related_synonym: lipoprotein binding;   plasma lipoprotein binding


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lipoprotein particle binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoa1 apolipoprotein A1 JBrowse link 8 50,525,091 50,526,875 RGD:1624291
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:1624291
G Cd36 CD36 molecule JBrowse link 4 14,150,309 14,191,498 RGD:1624291
G Cdh13 cadherin 13 JBrowse link 19 50,848,793 51,971,618 RGD:1624291
G Gpihbp1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 JBrowse link 7 116,632,496 116,635,543 RGD:1624291
G Lpl lipoprotein lipase JBrowse link 16 22,537,687 22,561,487 RGD:1600115
RGD:1624291
G Mapt microtubule-associated protein tau JBrowse link 10 92,289,002 92,386,517 RGD:1600115
RGD:1624291
G Trem2 triggering receptor expressed on myeloid cells 2 JBrowse link 9 14,611,541 14,618,076 RGD:1624291
chylomicron binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gpihbp1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 JBrowse link 7 116,632,496 116,635,543 RGD:1624291
RGD:13792537
G Lipc lipase C, hepatic type JBrowse link 8 77,272,582 77,398,485 RGD:2308763
high-density lipoprotein particle binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca1 ATP binding cassette subfamily A member 1 JBrowse link 5 69,857,717 69,983,042 RGD:1598535
G Apoa1 apolipoprotein A1 JBrowse link 8 50,525,091 50,526,875 RGD:1624291
G Apoa2 apolipoprotein A2 JBrowse link 13 89,596,872 89,598,805 RGD:1624291
RGD:13792537
G Cd36 CD36 molecule JBrowse link 4 14,150,309 14,191,498 RGD:1624291
G Gpihbp1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 JBrowse link 7 116,632,496 116,635,543 RGD:1624291
G Hspd1 heat shock protein family D (Hsp60) member 1 JBrowse link 9 61,680,529 61,691,202 RGD:1624291
G Lrp8 LDL receptor related protein 8 JBrowse link 5 127,404,348 127,476,636 RGD:2302271
G Scarb1 scavenger receptor class B, member 1 JBrowse link 12 36,694,952 36,761,445 RGD:1624291
G Trem2 triggering receptor expressed on myeloid cells 2 JBrowse link 9 14,611,541 14,618,076 RGD:1624291
low-density lipoprotein particle binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apcs amyloid P component, serum JBrowse link 13 91,426,621 91,427,417 RGD:13792537
G Cd36 CD36 molecule JBrowse link 4 14,150,309 14,191,498 RGD:1624291
G Cdh13 cadherin 13 JBrowse link 19 50,848,793 51,971,618 RGD:1624291
G Colec12 collectin sub-family member 12 JBrowse link 18 867,048 1,054,047 RGD:1624291
RGD:1600115
G Crp C-reactive protein JBrowse link 13 91,080,448 91,081,358 RGD:1624291
RGD:13792537
RGD:9586005
G Ldlr low density lipoprotein receptor JBrowse link 8 22,750,425 22,773,305 RGD:1600115
RGD:1624291
G Lipc lipase C, hepatic type JBrowse link 8 77,272,582 77,398,485 RGD:2308769
RGD:2308763
G Mptx1 mucosal pentraxin 1 JBrowse link 13 91,772,927 91,827,231 RGD:13792537
G Msr1 macrophage scavenger receptor 1 JBrowse link 16 56,817,714 56,900,025 RGD:1624291
RGD:13792537
G Pcsk9 proprotein convertase subtilisin/kexin type 9 JBrowse link 5 126,031,368 126,053,726 RGD:1624291
RGD:1600115
G Scarb1 scavenger receptor class B, member 1 JBrowse link 12 36,694,952 36,761,445 RGD:1624291
RGD:1600115
G Scarf1 scavenger receptor class F, member 1 JBrowse link 10 63,662,967 63,683,916 RGD:1624291
RGD:13792537
G Sorl1 sortilin related receptor 1 JBrowse link 8 46,228,077 46,287,171 RGD:1624291
G Stab1 stabilin 1 JBrowse link 16 7,220,434 7,250,934 RGD:1624291
G Stab2 stabilin 2 JBrowse link 7 27,369,853 27,552,078 RGD:1600115
RGD:13792537
RGD:1624291
G Thbs1 thrombospondin 1 JBrowse link 3 109,862,120 109,873,466 RGD:1624291
G Trem2 triggering receptor expressed on myeloid cells 2 JBrowse link 9 14,611,541 14,618,076 RGD:1624291
G Vcan versican JBrowse link 2 18,490,102 18,587,340 RGD:632588
very-low-density lipoprotein particle binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pcsk9 proprotein convertase subtilisin/kexin type 9 JBrowse link 5 126,031,368 126,053,726 RGD:1624291
RGD:1600115
G Trem2 triggering receptor expressed on myeloid cells 2 JBrowse link 9 14,611,541 14,618,076 RGD:1624291
G Vldlr very low density lipoprotein receptor JBrowse link 1 245,236,819 245,273,688 RGD:1624291
RGD:1600115

Term paths to the root
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Term Annotations click to browse term
  molecular_function 19526
    binding 15909
      protein-containing complex binding 1501
        protein-lipid complex binding 28
          lipoprotein particle binding 28
            chylomicron binding 2
            high-density lipoprotein particle binding 9
            intermediate-density lipoprotein particle binding 0
            low-density lipoprotein particle binding 18
            very-low-density lipoprotein particle binding 3
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.