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ONTOLOGY REPORT - ANNOTATIONS


Term:plasma lipoprotein particle organization
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Accession:GO:0071827 term browser browse the term
Definition:A protein-lipid complex subunit organization process that results in the formation, disassembly, or alteration of a plasma lipoprotein particle. A plasma lipoprotein particle is a spherical particle with a hydrophobic core of triglycerides and/or cholesterol esters, surrounded by an amphipathic monolayer of phospholipids, cholesterol and apolipoproteins.
Synonyms:exact_synonym: plasma lipoprotein particle organisation


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chylomicron assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lpcat3 lysophosphatidylcholine acyltransferase 3 JBrowse link 4 157,181,722 157,222,997 RGD:1600115
RGD:1624291
G Plagl2 PLAG1 like zinc finger 2 JBrowse link 3 148,709,564 148,722,777 RGD:1624291
chylomicron remodeling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lipc lipase C, hepatic type JBrowse link 8 77,272,582 77,398,485 RGD:2308767
G Lpl lipoprotein lipase JBrowse link 16 22,537,687 22,561,487 RGD:1600115
RGD:1624291
high-density lipoprotein particle assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca1 ATP binding cassette subfamily A member 1 JBrowse link 5 69,857,717 69,983,042 RGD:1624291
G Abca7 ATP binding cassette subfamily A member 7 JBrowse link 7 12,742,433 12,762,423 RGD:1624291
RGD:1600115
G Apoa1 apolipoprotein A1 JBrowse link 8 50,525,091 50,526,875 RGD:1624291
RGD:13792537
G Apoa2 apolipoprotein A2 JBrowse link 13 89,596,872 89,598,805 RGD:1624291
RGD:13792537
G Apoa4 apolipoprotein A4 JBrowse link 8 50,536,983 50,539,371 RGD:13792537
G Apoa5 apolipoprotein A5 JBrowse link 8 50,559,079 50,561,720 RGD:13792537
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:1600115
RGD:1624291
G Apom apolipoprotein M JBrowse link 20 5,120,473 5,123,073 RGD:1624291
RGD:13792537
high-density lipoprotein particle remodeling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca5 ATP binding cassette subfamily A member 5 JBrowse link 10 98,573,226 98,645,028 RGD:1624291
RGD:1600115
G Abcg1 ATP binding cassette subfamily G member 1 JBrowse link 20 9,743,269 9,842,735 RGD:1624291
G Apoa1 apolipoprotein A1 JBrowse link 8 50,525,091 50,526,875 RGD:1624291
G Apoa2 apolipoprotein A2 JBrowse link 13 89,596,872 89,598,805 RGD:1624291
RGD:13792537
G Apoc3 apolipoprotein C3 JBrowse link 8 50,529,318 50,531,498 RGD:1624291
RGD:1600115
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:1624291
RGD:1600115
G Apom apolipoprotein M JBrowse link 20 5,120,473 5,123,073 RGD:1624291
RGD:13792537
G Lcat lecithin cholesterol acyltransferase JBrowse link 19 37,913,333 37,916,799 RGD:1624291
G Lipc lipase C, hepatic type JBrowse link 8 77,272,582 77,398,485 RGD:2308770
RGD:1600115
RGD:1624291
G Lipg lipase G, endothelial type JBrowse link 18 70,903,528 70,924,434 RGD:1624291
G Pla2g3 phospholipase A2, group III JBrowse link 14 83,724,828 83,730,614 RGD:1624291
G Pltp phospholipid transfer protein JBrowse link 3 161,304,469 161,322,289 RGD:13792537
RGD:1624291
G Scarb1 scavenger receptor class B, member 1 JBrowse link 12 36,694,952 36,761,445 RGD:1624291
low-density lipoprotein particle remodeling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcg1 ATP binding cassette subfamily G member 1 JBrowse link 20 9,743,269 9,842,735 RGD:1624291
G Apoa2 apolipoprotein A2 JBrowse link 13 89,596,872 89,598,805 RGD:1624291
RGD:13792537
G Apob apolipoprotein B JBrowse link 6 33,176,826 33,216,381 RGD:1624291
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:1624291
G Lipc lipase C, hepatic type JBrowse link 8 77,272,582 77,398,485 RGD:2308769
RGD:1600115
RGD:2308763
RGD:1624291
G Mpo myeloperoxidase JBrowse link 10 75,087,892 75,098,260 RGD:1624291
G Mttp microsomal triglyceride transfer protein JBrowse link 2 243,366,181 243,407,608 RGD:1624291
G Pla2g10 phospholipase A2, group X JBrowse link 10 1,509,732 1,520,970 RGD:1624291
G Pla2g12b phospholipase A2, group XIIB JBrowse link 20 28,989,440 29,007,967 RGD:1624291
G Pla2g2e phospholipase A2, group IIE JBrowse link 5 157,327,657 157,333,039 RGD:1624291
G Pla2g3 phospholipase A2, group III JBrowse link 14 83,724,828 83,730,614 RGD:1624291
G Pla2g5 phospholipase A2, group V JBrowse link 5 157,247,601 157,268,968 RGD:1600115
RGD:1624291
G Pla2g7 phospholipase A2 group VII JBrowse link 9 19,935,754 19,978,013 RGD:1624291
negative regulation of plasma lipoprotein oxidation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoa4 apolipoprotein A4 JBrowse link 8 50,536,983 50,539,371 RGD:1624291
RGD:1600115
G Apom apolipoprotein M JBrowse link 20 5,120,473 5,123,073 RGD:1624291
G Pon1 paraoxonase 1 JBrowse link 4 30,249,749 30,276,297 RGD:1624291
negative regulation of very-low-density lipoprotein particle remodeling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoa1 apolipoprotein A1 JBrowse link 8 50,525,091 50,526,875 RGD:1624291
G Apoa2 apolipoprotein A2 JBrowse link 13 89,596,872 89,598,805 RGD:1624291
G Apoc3 apolipoprotein C3 JBrowse link 8 50,529,318 50,531,498 RGD:1624291
RGD:1600115
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 JBrowse link 7 30,003,429 30,162,095 RGD:1624291
plasma lipoprotein particle assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mttp microsomal triglyceride transfer protein JBrowse link 2 243,366,181 243,407,608 RGD:1624291
plasma lipoprotein particle oxidation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pla2g7 phospholipase A2 group VII JBrowse link 9 19,935,754 19,978,013 RGD:1624291
plasma lipoprotein particle remodeling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoc1 apolipoprotein C1 JBrowse link 1 80,606,638 80,609,921 RGD:1624291
positive regulation of high-density lipoprotein particle assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca1 ATP binding cassette subfamily A member 1 JBrowse link 5 69,857,717 69,983,042 RGD:1624291
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 JBrowse link 1 100,554,577 100,559,896 RGD:1624291
positive regulation of very-low-density lipoprotein particle remodeling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoa5 apolipoprotein A5 JBrowse link 8 50,559,079 50,561,720 RGD:1624291
RGD:1600115
regulation of high-density lipoprotein particle assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lcat lecithin cholesterol acyltransferase JBrowse link 19 37,913,333 37,916,799 RGD:1624291
triglyceride-rich lipoprotein particle remodeling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoa2 apolipoprotein A2 JBrowse link 13 89,596,872 89,598,805 RGD:1624291
RGD:13792537
G Apoa5 apolipoprotein A5 JBrowse link 8 50,559,079 50,561,720 RGD:1624291
RGD:1600115
very-low-density lipoprotein particle assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acsl3 acyl-CoA synthetase long-chain family member 3 JBrowse link 9 84,569,601 84,593,565 RGD:1624291
G Arf1 ADP-ribosylation factor 1 JBrowse link 10 45,562,700 45,579,214 RGD:9684856
G Ces1d carboxylesterase 1D JBrowse link 19 15,195,514 15,239,827 RGD:1624291
RGD:1600115
G Dgat1 diacylglycerol O-acyltransferase 1 JBrowse link 7 117,566,363 117,576,735 RGD:1624291
RGD:1600115
G Fech ferrochelatase JBrowse link 18 59,941,992 59,975,192 RGD:1624291
G Lpcat3 lysophosphatidylcholine acyltransferase 3 JBrowse link 4 157,181,722 157,222,997 RGD:1600115
RGD:1624291
G Mfsd2a major facilitator superfamily domain containing 2A JBrowse link 5 140,642,865 140,657,759 RGD:1624291
G Soat1 sterol O-acyltransferase 1 JBrowse link 13 74,035,258 74,077,759 RGD:1624291
RGD:1600115
G Soat2 sterol O-acyltransferase 2 JBrowse link 7 143,754,892 143,767,989 RGD:1624291
RGD:1600115
very-low-density lipoprotein particle remodeling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoa1 apolipoprotein A1 JBrowse link 8 50,525,091 50,526,875 RGD:13792537
G Apoa4 apolipoprotein A4 JBrowse link 8 50,536,983 50,539,371 RGD:1624291
RGD:13792537
RGD:1600115
G Apoa5 apolipoprotein A5 JBrowse link 8 50,559,079 50,561,720 RGD:13792537
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:1624291
RGD:1600115
G Lcat lecithin cholesterol acyltransferase JBrowse link 19 37,913,333 37,916,799 RGD:1624291
G Lipc lipase C, hepatic type JBrowse link 8 77,272,582 77,398,485 RGD:2308780
RGD:1600115
RGD:1624291
G Lpl lipoprotein lipase JBrowse link 16 22,537,687 22,561,487 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19858
    multicellular organismal process 8951
      plasma lipoprotein particle organization 40
        plasma lipoprotein particle assembly + 21
        plasma lipoprotein particle disassembly + 0
        plasma lipoprotein particle remodeling + 27
Path 2
Term Annotations click to browse term
  biological_process 19858
    cellular process 18618
      cellular component organization or biogenesis 6706
        cellular component organization 6456
          protein-containing complex subunit organization 1803
            protein-lipid complex subunit organization 44
              plasma lipoprotein particle organization 40
                plasma lipoprotein particle assembly + 21
                plasma lipoprotein particle disassembly + 0
                plasma lipoprotein particle remodeling + 27
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.