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ONTOLOGY REPORT - ANNOTATIONS


Term:S-shaped body morphogenesis
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Accession:GO:0072050 term browser browse the term
Definition:The process in which the S-shaped body is generated and organized. The S-shaped body is the successor of the comma-shaped body that contributes to the morphogenesis of the nephron.


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S-shaped body morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DSPP dentin sialophosphoprotein ISO (MGI:MGI:3686561|PMID:16937369) MGI PMID:16937369 MGI:MGI:3686561 NCBI chr 4:79,903,923...79,909,836 JBrowse link
G HES1 hes family bHLH transcription factor 1 ISO (PMID:15821257) UniProtKB PMID:15821257 NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257
JBrowse link
G HES5 hes family bHLH transcription factor 5 ISO (PMID:15821257) UniProtKB PMID:15821257 NCBI chr 1:1,261,260...1,263,128 JBrowse link
G HEY1 hes related family bHLH transcription factor with YRPW motif 1 ISO (PMID:15821257) UniProtKB PMID:15821257 NCBI chr 8:76,286,433...76,290,507
Ensembl chr 8:77,913,761...77,921,201
JBrowse link
G LHX1 LIM homeobox 1 ISO (MGI:MGI:5009392|PMID:17610272) UniProtKB PMID:17610272 MGI:MGI:5009392 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751
JBrowse link
G PAX8 paired box 8 ISO (PMID:1723950) UniProtKB PMID:1723950 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
metanephric S-shaped body morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHX1 LIM homeobox 1 ISO PMID:9496787
(PMID:7909549)
UniProt
UniProtKB
PMID:7909549, PMID:9496787 RGD:8553921 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751
JBrowse link
G PAX8 paired box 8 ISO (PMID:1337742) UniProtKB PMID:1337742 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865
JBrowse link
G PDGFRB platelet derived growth factor receptor beta ISO PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr 5:145,538,330...145,580,312
Ensembl chr 5:151,543,891...151,585,530
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chr 4:80,295,243...80,365,271
Ensembl chr 4:91,019,734...91,086,775
JBrowse link
G WT1 WT1 transcription factor ISO (PMID:18618131)
(PMID:10101119)
(MGI:MGI:1333093|PMID:10101119)
UniProtKB PMID:10101119, PMID:18618131 MGI:MGI:1333093 NCBI chr11:32,349,807...32,398,494 JBrowse link
negative regulation of metanephric S-shaped body morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 ISO (PMID:12141440) UniProtKB PMID:12141440 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12527
    developmental process 5817
      anatomical structure morphogenesis 2573
        S-shaped body morphogenesis 10
          mesonephric S-shaped body morphogenesis 0
          metanephric S-shaped body morphogenesis + 6
Path 2
Term Annotations click to browse term
  biological_process 12527
    developmental process 5817
      anatomical structure development 5431
        multicellular organism development 4970
          system development 4675
            urogenital system development 415
              renal system development 369
                kidney development 355
                  kidney morphogenesis 107
                    nephron morphogenesis 88
                      S-shaped body morphogenesis 10
                        mesonephric S-shaped body morphogenesis 0
                        metanephric S-shaped body morphogenesis + 6
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.