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ONTOLOGY REPORT - ANNOTATIONS


Term:S-shaped body morphogenesis
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Accession:GO:0072050 term browser browse the term
Definition:The process in which the S-shaped body is generated and organized. The S-shaped body is the successor of the comma-shaped body that contributes to the morphogenesis of the nephron.


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S-shaped body morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DSPP dentin sialophosphoprotein ISO (MGI:MGI:3686561|PMID:16937369) MGI PMID:16937369 MGI:MGI:3686561 NCBI chr 4:87,608,529...87,616,873
Ensembl chr 4:87,608,529...87,616,873
JBrowse link
G HES1 hes family bHLH transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:194,136,148...194,138,732
Ensembl chr 3:194,136,148...194,138,732
JBrowse link
G HES5 hes family bHLH transcription factor 5 IEA Ensembl GO_REF:0000107 NCBI chr 1:2,528,745...2,530,554
Ensembl chr 1:2,528,745...2,530,263
JBrowse link
G HEY1 hes related family bHLH transcription factor with YRPW motif 1 ISO (PMID:15821257) UniProtKB PMID:15821257 NCBI chr 8:79,764,010...79,767,767
Ensembl chr 8:79,764,010...79,767,857
Ensembl chr 8:79,764,010...79,767,857
JBrowse link
G LHX1 LIM homeobox 1 ISS UniProtKB GO_REF:0000024 NCBI chr17:36,937,475...36,944,612
Ensembl chr17:36,936,785...36,944,612
JBrowse link
G PAX8 paired box 8 ISO (PMID:1723950) UniProtKB PMID:1723950 NCBI chr 2:113,215,997...113,278,921
Ensembl chr 2:113,215,997...113,278,921
JBrowse link
metanephric S-shaped body morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHX1 LIM homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr17:36,937,475...36,944,612
Ensembl chr17:36,936,785...36,944,612
JBrowse link
G PAX8 paired box 8 IEP (PMID:1337742) UniProtKB PMID:1337742 NCBI chr 2:113,215,997...113,278,921
Ensembl chr 2:113,215,997...113,278,921
JBrowse link
G PDGFRB platelet derived growth factor receptor beta IEA Ensembl GO_REF:0000107 NCBI chr 5:150,113,839...150,155,845
Ensembl chr 5:150,113,839...150,155,872
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel IEP (PMID:11891195) UniProtKB PMID:11891195 NCBI chr 4:88,007,635...88,077,779
Ensembl chr 4:88,007,635...88,077,777
JBrowse link
G WT1 WT1 transcription factor IGI (PMID:10101119) UniProtKB PMID:10101119 NCBI chr11:32,387,775...32,435,539
Ensembl chr11:32,387,775...32,435,564
Ensembl chr11:32,387,775...32,435,564
JBrowse link
negative regulation of metanephric S-shaped body morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 IDA (PMID:12141440) UniProtKB PMID:12141440 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18650
    developmental process 7452
      anatomical structure morphogenesis 3088
        S-shaped body morphogenesis 10
          mesonephric S-shaped body morphogenesis 0
          metanephric S-shaped body morphogenesis + 6
Path 2
Term Annotations click to browse term
  biological_process 18650
    developmental process 7452
      anatomical structure development 6856
        multicellular organism development 6332
          system development 5737
            urogenital system development 431
              renal system development 381
                kidney development 368
                  kidney morphogenesis 109
                    nephron morphogenesis 89
                      S-shaped body morphogenesis 10
                        mesonephric S-shaped body morphogenesis 0
                        metanephric S-shaped body morphogenesis + 6
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.