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ONTOLOGY REPORT - ANNOTATIONS


Term:S-shaped body morphogenesis
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Accession:GO:0072050 term browser browse the term
Definition:The process in which the S-shaped body is generated and organized. The S-shaped body is the successor of the comma-shaped body that contributes to the morphogenesis of the nephron.


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S-shaped body morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dspp dentin sialophosphoprotein IMP (MGI:MGI:3686561|PMID:16937369) MGI PMID:16937369 MGI:MGI:3686561 NCBI chr 5:104,170,703...104,180,127
Ensembl chr 5:104,170,712...104,180,127
JBrowse link
G Hes1 hes family bHLH transcription factor 1 IEP (PMID:15821257) UniProtKB PMID:15821257 NCBI chr16:30,065,357...30,067,796
Ensembl chr16:30,064,384...30,067,796
JBrowse link
G Hes5 hes family bHLH transcription factor 5 IEP (PMID:15821257) UniProtKB PMID:15821257 NCBI chr 4:154,960,626...154,962,372
Ensembl chr 4:154,960,923...154,962,371
JBrowse link
G Hey1 hairy/enhancer-of-split related with YRPW motif 1 IEP (PMID:15821257) UniProtKB PMID:15821257 NCBI chr 3:8,663,359...8,667,038
Ensembl chr 3:8,663,359...8,667,256
JBrowse link
G Lhx1 LIM homeobox protein 1 IMP (MGI:MGI:5009392|PMID:17610272) UniProtKB PMID:17610272 MGI:MGI:5009392 NCBI chr11:84,517,975...84,525,534
Ensembl chr11:84,518,284...84,525,535
JBrowse link
G Pax8 paired box 8 IEP (PMID:1723950) UniProtKB PMID:1723950 NCBI chr 2:24,420,551...24,475,599
Ensembl chr 2:24,420,560...24,475,599
JBrowse link
metanephric S-shaped body morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox protein 1 IEP (PMID:7909549) UniProtKB PMID:7909549 NCBI chr11:84,517,975...84,525,534
Ensembl chr11:84,518,284...84,525,535
JBrowse link
G Pax8 paired box 8 ISO (PMID:1337742) UniProtKB PMID:1337742 NCBI chr 2:24,420,551...24,475,599
Ensembl chr 2:24,420,560...24,475,599
JBrowse link
G Pdgfrb platelet derived growth factor receptor, beta polypeptide ISO PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr18:61,045,127...61,085,067
Ensembl chr18:61,045,150...61,085,061
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (PMID:11891195) UniProtKB PMID:11891195 NCBI chr 5:104,453,982...104,505,819
Ensembl chr 5:104,459,450...104,505,819
JBrowse link
G Wt1 Wilms tumor 1 homolog IMP
ISO
IEP
(MGI:MGI:1333093|PMID:10101119)
(PMID:18618131)
UniProtKB
MGI
PMID:10101119, PMID:18618131 GO_REF:0000096, MGI:MGI:1333093, MGI:MGI:4834177 NCBI chr 2:105,126,529...105,173,614
Ensembl chr 2:105,126,529...105,173,616
JBrowse link
negative regulation of metanephric S-shaped body morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr14:46,383,525...46,390,669
Ensembl chr14:46,383,520...46,390,669
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23360
    developmental process 7015
      anatomical structure morphogenesis 2892
        S-shaped body morphogenesis 10
          mesonephric S-shaped body morphogenesis 0
          metanephric S-shaped body morphogenesis + 6
Path 2
Term Annotations click to browse term
  biological_process 23360
    developmental process 7015
      anatomical structure development 6487
        multicellular organism development 5953
          system development 5367
            urogenital system development 436
              renal system development 387
                kidney development 373
                  kidney morphogenesis 108
                    nephron morphogenesis 89
                      S-shaped body morphogenesis 10
                        mesonephric S-shaped body morphogenesis 0
                        metanephric S-shaped body morphogenesis + 6
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.