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ONTOLOGY REPORT - ANNOTATIONS


Term:kidney mesenchyme development
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Accession:GO:0072074 term browser browse the term
Definition:The biological process whose specific outcome is the progression of a kidney mesenchyme from an initial condition to its mature state. This process begins with the formation of kidney mesenchyme and ends with the mature structure. Kidney mesenchyme is the tissue made up of loosely connected mesenchymal cells in the kidney.


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mesenchymal cell differentiation involved in kidney development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Amer1 APC membrane recruitment protein 1 JBrowse link NW_004955475 4,451,094 4,470,750 RGD:9068941
G Bmp4 bone morphogenetic protein 4 JBrowse link NW_004955409 9,432,835 9,439,680 RGD:9068941
G Six2 SIX homeobox 2 JBrowse link NW_004955441 12,029,530 12,033,214 RGD:9068941
metanephric cap mesenchymal cell proliferation involved in metanephros development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Osr1 odd-skipped related transcription factor 1 JBrowse link NW_004955469 1,954,470 1,961,344 RGD:9068941
metanephric mesenchymal cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Osr1 odd-skipped related transcription factor 1 JBrowse link NW_004955469 1,954,470 1,961,344 RGD:9068941
G Pax2 paired box 2 JBrowse link NW_004955485 9,351,913 9,430,607 RGD:9068941
G Stat1 signal transducer and activator of transcription 1 JBrowse link NW_004955403 8,156,660 8,192,018 RGD:9068941
G Tcf21 transcription factor 21 JBrowse link NW_004955439 2,617,562 2,620,613 RGD:9068941
G Wnt4 Wnt family member 4 JBrowse link NW_004955452 2,319,446 2,344,740 RGD:9068941
metanephric mesenchymal cell proliferation involved in metanephros development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp7 bone morphogenetic protein 7 JBrowse link NW_004955445 2,154,057 2,235,594 RGD:9068941
G Shh sonic hedgehog signaling molecule JBrowse link NW_004955491 8,647,133 8,657,381 RGD:9068941
G Stat1 signal transducer and activator of transcription 1 JBrowse link NW_004955403 8,156,660 8,192,018 RGD:9068941
metanephric mesenchyme development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Basp1 brain abundant membrane attached signal protein 1 JBrowse link NW_004955426 6,149,756 6,193,222 RGD:9068941
G Osr1 odd-skipped related transcription factor 1 JBrowse link NW_004955469 1,954,470 1,961,344 RGD:9068941
G Pax2 paired box 2 JBrowse link NW_004955485 9,351,913 9,430,607 RGD:9068941
G Pdgfrb platelet derived growth factor receptor beta JBrowse link NW_004955415 4,365,848 4,403,317 RGD:9068941
G Pkd2 polycystin 2, transient receptor potential cation channel JBrowse link NW_004955474 1,831,221 1,868,170 RGD:9068941
G Six1 SIX homeobox 1 JBrowse link NW_004955466 8,961,597 8,966,069 RGD:9068941
G Six4 SIX homeobox 4 JBrowse link NW_004955466 8,902,728 8,915,685 RGD:9068941
G Wt1 WT1 transcription factor JBrowse link NW_004955476 10,464,688 10,504,473 RGD:9068941
metanephric mesenchyme morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp7 bone morphogenetic protein 7 JBrowse link NW_004955445 2,154,057 2,235,594 RGD:9068941
G Osr1 odd-skipped related transcription factor 1 JBrowse link NW_004955469 1,954,470 1,961,344 RGD:9068941
G Smad4 SMAD family member 4 JBrowse link NW_004955402 35,956,080 36,001,746 RGD:9068941
nephrogenic mesenchyme development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Foxd1 forkhead box D1 JBrowse link NW_004955425 27,158,601 27,159,447 RGD:9068941
nephrogenic mesenchyme morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp7 bone morphogenetic protein 7 JBrowse link NW_004955445 2,154,057 2,235,594 RGD:9068941
G Smad4 SMAD family member 4 JBrowse link NW_004955402 35,956,080 36,001,746 RGD:9068941
positive regulation of metanephric cap mesenchymal cell proliferation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link NW_004955461 2,714,022 2,718,872 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 14568
    developmental process 5902
      anatomical structure development 5470
        animal organ development 3291
          mesenchyme development 257
            kidney mesenchyme development 19
              kidney mesenchymal cell proliferation + 3
              kidney mesenchyme morphogenesis + 4
              kidney stroma development 0
              mesenchymal cell differentiation involved in kidney development + 8
              mesonephric mesenchyme development + 0
              metanephric mesenchyme development + 15
              nephrogenic mesenchyme development + 3
Path 2
Term Annotations click to browse term
  biological_process 14568
    developmental process 5902
      anatomical structure development 5470
        multicellular organism development 5016
          system development 4485
            urogenital system development 323
              renal system development 284
                kidney development 274
                  kidney mesenchyme development 19
                    kidney mesenchymal cell proliferation + 3
                    kidney mesenchyme morphogenesis + 4
                    kidney stroma development 0
                    mesenchymal cell differentiation involved in kidney development + 8
                    mesonephric mesenchyme development + 0
                    metanephric mesenchyme development + 15
                    nephrogenic mesenchyme development + 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.