ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of stem cell proliferation
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Accession:GO:0072091 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of stem cell proliferation. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.


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regulation of stem cell proliferation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ago3 argonaute RISC catalytic component 3 JBrowse link 5 144,355,792 144,436,509 RGD:1624291
RGD:1600115
G Dgcr8 DGCR8 microprocessor complex subunit JBrowse link 11 86,852,682 86,885,233 RGD:1624291
G Fgfr1 Fibroblast growth factor receptor 1 JBrowse link 16 71,265,390 71,319,046 RGD:2325179
G Hmgb2 high mobility group box 2 JBrowse link 16 36,077,615 36,080,191 RGD:1624291
RGD:1600115
G Hmgb2l1 high mobility group box 2-like 1 JBrowse link 11 49,708,038 49,709,128 RGD:1600115
G Mpl MPL proto-oncogene, thrombopoietin receptor JBrowse link 5 137,268,412 137,282,032 RGD:1624291
G Ncoa3 nuclear receptor coactivator 3 JBrowse link 3 162,692,176 162,788,582 RGD:1624291
G Nf2 neurofibromin 2 JBrowse link 14 84,996,905 85,088,547 RGD:1624291
RGD:1600115
G RGD1559962 similar to High mobility group protein 2 (HMG-2) JBrowse link 1 20,416,735 20,417,959 RGD:1600115
G Sox17 SRY box 17 JBrowse link 5 14,890,318 14,895,907 RGD:1624291
RGD:1600115
G Sox18 SRY box 18 JBrowse link 3 177,177,237 177,179,039 RGD:1624291
RGD:1600115
G Yap1 yes-associated protein 1 JBrowse link 8 6,133,014 6,204,240 RGD:1624291
RGD:1600115
G Zfp36l1 zinc finger protein 36, C3H type-like 1 JBrowse link 6 103,308,032 103,313,074 RGD:1624291
RGD:1600115
negative regulation of neuroblast proliferation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bdnf brain-derived neurotrophic factor JBrowse link 3 100,768,637 100,819,216 RGD:1624291
G Cd24 CD24 molecule JBrowse link 20 48,335,540 48,340,847 RGD:1624291
RGD:1600115
G Ctnna1 catenin alpha 1 JBrowse link 18 27,923,229 28,055,972 RGD:1624291
RGD:1600115
G Kctd11 potassium channel tetramerization domain containing 11 JBrowse link 10 56,489,552 56,491,715 RGD:1624291
RGD:1600115
G Nf1 neurofibromin 1 JBrowse link 10 66,732,460 66,928,706 RGD:1624291
RGD:1600115
G Ptn pleiotrophin JBrowse link 4 64,239,156 64,330,996 RGD:1600115
RGD:1624291
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:1579761
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:1624291
RGD:1600115
G Vax1 ventral anterior homeobox 1 JBrowse link 1 280,334,897 280,338,813 RGD:1624291
RGD:1600115
negative regulation of stem cell proliferation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fbln1 fibulin 1 JBrowse link 7 126,096,793 126,176,468 RGD:1624291
RGD:1600115
G Fermt1 fermitin family member 1 JBrowse link 3 125,566,744 125,607,864 RGD:1624291
RGD:1600115
G Kdf1 keratinocyte differentiation factor 1 JBrowse link 5 151,740,902 151,752,863 RGD:1624291
RGD:1600115
G Nfatc1 nuclear factor of activated T-cells 1 JBrowse link 18 77,203,517 77,322,690 RGD:1624291
G Ovol1 ovo like transcriptional repressor 1 JBrowse link 1 220,927,309 220,938,814 RGD:1624291
RGD:1600115
G Ovol2 ovo-like zinc finger 2 JBrowse link 3 138,433,990 138,464,511 RGD:1624291
RGD:1600115
G Snai2 snail family transcriptional repressor 2 JBrowse link 11 90,404,421 90,406,730 RGD:1624291
positive regulation of hematopoietic stem cell proliferation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atxn1l ataxin 1-like JBrowse link 19 41,932,356 41,939,456 RGD:1624291
G Cxcl1 C-X-C motif chemokine ligand 1 JBrowse link 14 18,743,678 18,745,457 RGD:1600115
RGD:1624291
G Kitlg KIT ligand JBrowse link 7 42,269,784 42,351,054 RGD:1624291
RGD:1600115
G N4bp2l2 NEDD4 binding protein 2-like 2 JBrowse link 12 627,128 650,604 RGD:1624291
G Pdcd2 programmed cell death 2 JBrowse link 1 57,512,968 57,518,458 RGD:1624291
RGD:1600115
G Thpo thrombopoietin JBrowse link 11 82,845,676 82,853,439 RGD:1624291
RGD:13792537
G Thpol1 thrombopoietin like 1 JBrowse link 11 83,867,549 83,874,670 RGD:13792537
positive regulation of mesenchymal stem cell proliferation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp4 bone morphogenetic protein 4 JBrowse link 15 20,776,060 20,791,013 RGD:9068401
G Ltbp3 latent transforming growth factor beta binding protein 3 JBrowse link 1 221,099,155 221,116,096 RGD:1624291
RGD:1600115
positive regulation of neuroblast proliferation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aspm abnormal spindle microtubule assembly JBrowse link 13 56,546,021 56,591,793 RGD:1624291
RGD:1600115
G Bex1 brain expressed, X-linked 1 JBrowse link X 106,761,388 106,771,656 RGD:8554704
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:1600115
RGD:1624291
G Cx3cl1 C-X3-C motif chemokine ligand 1 JBrowse link 19 10,644,267 10,654,861 RGD:9491804
G Cx3cr1 C-X3-C motif chemokine receptor 1 JBrowse link 8 128,740,756 128,754,514 RGD:9491804
G Dct dopachrome tautomerase JBrowse link 15 103,208,174 103,245,033 RGD:1624291
G Disc1 DISC1 scaffold protein JBrowse link 19 57,818,838 58,069,992 RGD:1624291
RGD:1600115
G Dmrta2 DMRT-like family A2 JBrowse link 5 129,754,295 129,760,045 RGD:1624291
G Drd2 dopamine receptor D2 JBrowse link 8 53,678,777 53,743,643 RGD:1624291
RGD:1600115
G Foxg1 forkhead box G1 JBrowse link 6 69,971,227 69,974,037 RGD:1624291
RGD:1600115
G Fzd3 frizzled class receptor 3 JBrowse link 15 48,601,259 48,670,257 RGD:1624291
RGD:1600115
G Gli3 GLI family zinc finger 3 JBrowse link 17 52,294,942 52,569,036 RGD:1624291
RGD:1600115
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link 6 96,810,868 96,856,303 RGD:1624291
RGD:1600115
G Kdm1a lysine demethylase 1A JBrowse link 5 154,909,003 154,965,171 RGD:1600115
RGD:1624291
G Mapk8 mitogen-activated protein kinase 8 JBrowse link 16 9,620,854 9,709,342 RGD:10047173
G Notch1 notch receptor 1 JBrowse link 3 3,905,562 3,951,015 RGD:2325303
G Otp orthopedia homeobox JBrowse link 2 24,546,393 24,554,953 RGD:1624291
RGD:1600115
G Pax6 paired box 6 JBrowse link 3 95,700,241 95,728,682 RGD:1624291
RGD:1600115
G Shh sonic hedgehog signaling molecule JBrowse link 4 718,538 727,691 RGD:729868
RGD:1600115
RGD:1624291
G Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 JBrowse link 4 7,076,710 7,108,334 RGD:1624291
RGD:1600115
G Smo smoothened, frizzled class receptor JBrowse link 4 57,019,941 57,041,779 RGD:1624291
RGD:1600115
G Sox10 SRY box 10 JBrowse link 7 120,393,238 120,403,523 RGD:1624291
RGD:1600115
G Sox2 SRY box 2 JBrowse link 2 121,165,137 121,167,545 RGD:1624291
G Vegfa vascular endothelial growth factor A JBrowse link 9 17,340,341 17,355,681 RGD:1624291
G Vegfc vascular endothelial growth factor C JBrowse link 16 40,440,371 40,555,178 RGD:8554518
G Wdr62 WD repeat domain 62 JBrowse link 1 90,995,545 91,034,592 RGD:10047173
G Zfp335 zinc finger protein 335 JBrowse link 3 161,357,201 161,378,073 RGD:1600115
RGD:1624291
positive regulation of stem cell proliferation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Epcam epithelial cell adhesion molecule JBrowse link 6 11,282,194 11,308,870 RGD:1624291
RGD:1600115
G Hdac5 histone deacetylase 5 JBrowse link 10 90,140,183 90,169,853 RGD:1624291
G Hmga2 high mobility group AT-hook 2 JBrowse link 7 65,159,944 65,275,408 RGD:1624291
RGD:1600115
G Hnrnpu heterogeneous nuclear ribonucleoprotein U JBrowse link 13 96,222,093 96,238,845 RGD:1624291
RGD:1600115
G Kdm1a lysine demethylase 1A JBrowse link 5 154,909,003 154,965,171 RGD:1624291
G Mir205 microRNA 205 JBrowse link 13 112,233,283 112,233,390 RGD:1624291
G Mir320a microRNA 320a JBrowse link 15 52,134,276 52,134,357 RGD:1624291
G Nanog Nanog homeobox JBrowse link 4 155,531,906 155,539,268 RGD:1624291
G Nfya nuclear transcription factor Y subunit alpha JBrowse link 9 14,551,752 14,577,002 RGD:1624291
G Ngf nerve growth factor JBrowse link 2 204,886,158 204,939,523 RGD:2303808
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 JBrowse link 20 47,286,843 47,306,318 RGD:1624291
RGD:1600115
G Ptprc protein tyrosine phosphatase, receptor type, C JBrowse link 13 55,061,561 55,174,150 RGD:1624291
RGD:1600115
G Setd1a SET domain containing 1A, histone lysine methyltransferase JBrowse link 1 199,222,584 199,247,993 RGD:1624291
G Sirt6 sirtuin 6 JBrowse link 7 10,937,622 10,943,048 RGD:1624291
RGD:1600115
G Sox11 SRY box 11 JBrowse link 6 46,629,967 46,631,988 RGD:1624291
RGD:1600115
G Taf4b TATA-box binding protein associated factor 4b JBrowse link 18 6,206,939 6,338,794 RGD:1624291
G Tbx3 T-box 3 JBrowse link 12 42,479,518 42,494,588 RGD:1624291
RGD:1600115
G Tert telomerase reverse transcriptase JBrowse link 1 32,250,876 32,275,330 RGD:1624291
RGD:1600115
regulation of hematopoietic stem cell proliferation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ace angiotensin I converting enzyme JBrowse link 10 94,170,766 94,213,831 RGD:1624291
RGD:1600115
G Eif2ak2 eukaryotic translation initiation factor 2-alpha kinase 2 JBrowse link 6 1,428,845 1,466,193 RGD:1624291
RGD:1600115
G Pim1 Pim-1 proto-oncogene, serine/threonine kinase JBrowse link 20 8,165,423 8,169,557 RGD:1624291
RGD:1600115
regulation of neuroblast proliferation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:1624291
RGD:1600115
G Six3 SIX homeobox 3 JBrowse link 6 8,886,730 8,891,094 RGD:1624291
G Tafa1 TAFA chemokine like family member 1 JBrowse link 4 128,818,468 128,942,088 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17896
    cell population proliferation 2082
      stem cell proliferation 144
        regulation of stem cell proliferation 88
          negative regulation of stem cell proliferation + 16
          positive regulation of stem cell proliferation + 53
          regulation of hematopoietic stem cell proliferation + 10
          regulation of mesenchymal stem cell proliferation + 2
          regulation of neuroblast proliferation + 39
Path 2
Term Annotations click to browse term
  biological_process 17896
    biological regulation 12607
      regulation of biological process 11951
        regulation of cellular process 11287
          regulation of cell population proliferation 1723
            regulation of stem cell proliferation 88
              negative regulation of stem cell proliferation + 16
              positive regulation of stem cell proliferation + 53
              regulation of hematopoietic stem cell proliferation + 10
              regulation of mesenchymal stem cell proliferation + 2
              regulation of neuroblast proliferation + 39
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.