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ONTOLOGY REPORT - ANNOTATIONS


Term:nephric duct development
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Accession:GO:0072176 term browser browse the term
Definition:The process whose specific outcome is the progression of a nephric duct over time, from its initial formation to a mature structure. A nephric duct is a tube that drains a primitive kidney.


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nephric duct development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B ISO MGI:MGI:1857856 (MGI:MGI:4430439|PMID:20040500) RGD PMID:20040500 MGI:MGI:4430439 NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
JBrowse link
BMP signaling pathway involved in nephric duct formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:10021330)
Ensembl
UniProt
RGD
PMID:10021330 GO_REF:0000024, GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
mesonephric duct development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Greb1l GREB1 like retinoic acid receptor coactivator ISO (MGI:MGI:6094060|PMID:29100091) RGD PMID:29100091 MGI:MGI:6094060 NCBI chr18:1,537,315...1,784,260
Ensembl chr18:1,723,565...1,784,233
JBrowse link
G Hnf1b HNF1 homeobox B ISO MGI:MGI:1857856 (MGI:MGI:4430439|PMID:20040500) RGD PMID:20040500 MGI:MGI:4430439 NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
JBrowse link
G Lhx1 LIM homeobox 1 IEP PMID:9496787 UniProt PMID:9496787 RGD:8553921 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
JBrowse link
G Pax2 paired box 2 ISO (MGI:MGI:3777712|PMID:14695376), (PMID:1723950) RGD PMID:1723950, PMID:14695376 MGI:MGI:3777712 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting ISO (PMID:11891195) RGD PMID:11891195 NCBI chr10:13,914,057...13,962,008
Ensembl chr10:13,915,214...13,962,008
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (PMID:11891195) RGD PMID:11891195 NCBI chr14:6,602,004...6,645,257
Ensembl chr14:6,602,004...6,645,257
JBrowse link
G Wnt11 Wnt family member 11 ISO (PMID:9757009) RGD PMID:9757009 NCBI chr 1:163,794,136...163,813,756
Ensembl chr 1:163,797,660...163,813,756
JBrowse link
mesonephric duct formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B ISO MGI:MGI:1857856 (MGI:MGI:4430439|PMID:20040500) RGD PMID:20040500 MGI:MGI:4430439 NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
JBrowse link
G Wnt9b Wnt family member 9B ISO MGI:MGI:3526437 (MGI:MGI:3588895|PMID:16054034) RGD PMID:16054034 MGI:MGI:3588895 NCBI chr10:91,785,892...91,808,061
Ensembl chr10:91,785,893...91,807,937
JBrowse link
mesonephric duct morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpc3 glypican 3 ISO
ISS
IEA
MGI:MGI:2159356 (MGI:MGI:1931343|PMID:11180950)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:11180950 GO_REF:0000024, GO_REF:0000107, MGI:MGI:1931343 NCBI chr  X:139,579,268...139,947,093
Ensembl chr  X:139,579,268...139,916,883
JBrowse link
G Osr1 odd-skipped related transcription factor 1 ISO
ISS
(MGI:MGI:3697513|PMID:16790474)
GO_REF:0000024
RGD
UniProt
PMID:16790474 GO_REF:0000024, MGI:MGI:3697513 NCBI chr 6:35,314,431...35,321,458
Ensembl chr 6:35,314,444...35,321,667
JBrowse link
nephric duct elongation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox 1 ISO (MGI:MGI:3613206|PMID:16216236) RGD PMID:16216236 MGI:MGI:3613206 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
JBrowse link
nephric duct formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 ISO
ISS
(MGI:MGI:3611949|PMID:16319112)
GO_REF:0000024
RGD
UniProt
PMID:16319112 GO_REF:0000024, MGI:MGI:3611949 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
JBrowse link
G Hnf1b HNF1 homeobox B ISO MGI:MGI:1857856 (MGI:MGI:4430449|PMID:19913010) RGD PMID:19913010 MGI:MGI:4430449 NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
JBrowse link
G Pax2 paired box 2 ISO
ISS
(MGI:MGI:2445273|PMID:12435636)
GO_REF:0000024
RGD
UniProt
PMID:12435636 GO_REF:0000024, MGI:MGI:2445273 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
nephric duct morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efnb2 ephrin B2 ISO MGI:MGI:3026687 (MGI:MGI:5604037|PMID:25139858) RGD PMID:25139858 MGI:MGI:5604037 NCBI chr16:86,631,151...86,672,050
Ensembl chr16:86,631,064...86,675,049
JBrowse link
G Epha4 Eph receptor A4 ISO MGI:MGI:95276 (MGI:MGI:5604037|PMID:25139858) RGD PMID:25139858 MGI:MGI:5604037 NCBI chr 9:83,111,222...83,253,486
Ensembl chr 9:83,111,222...83,253,458
JBrowse link
G Epha7 Eph receptor A7 ISO MGI:MGI:98277 (MGI:MGI:5604037|PMID:25139858) RGD PMID:25139858 MGI:MGI:5604037 NCBI chr 5:43,602,744...43,761,198
Ensembl chr 5:43,603,043...43,757,549
JBrowse link
G Gata3 GATA binding protein 3 ISO
ISS
(MGI:MGI:3822373|PMID:19112489)
GO_REF:0000024
RGD
UniProt
PMID:19112489 GO_REF:0000024, MGI:MGI:3822373 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
JBrowse link
G Lhx1 LIM homeobox 1 ISO
ISS
(MGI:MGI:3613206|PMID:16216236)
GO_REF:0000024
RGD
UniProt
PMID:16216236 GO_REF:0000024, MGI:MGI:3613206 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
JBrowse link
pronephric duct morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:16,478,127...16,601,769
Ensembl chr 1:16,478,127...16,601,769
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    multicellular organismal process 9055
      multicellular organism development 5735
        tube development 1208
          nephric duct development 16
            mesonephric duct development + 10
            nephric duct morphogenesis + 12
            pronephric duct development + 1
Path 2
Term Annotations click to browse term
  biological_process 20014
    developmental process 6812
      anatomical structure development 6256
        multicellular organism development 5735
          system development 5272
            urogenital system development 433
              renal system development 383
                kidney development 369
                  kidney epithelium development 160
                    nephric duct development 16
                      mesonephric duct development + 10
                      nephric duct morphogenesis + 12
                      pronephric duct development + 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.