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ONTOLOGY REPORT - ANNOTATIONS


Term:ureter development
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Accession:GO:0072189 term browser browse the term
Definition:The process whose specific outcome is the progression of the ureter over time, from its formation to the mature structure. The ureter is a muscular tube that transports urine from the kidney to the urinary bladder or from the Malpighian tubule to the hindgut.


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ureter development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxf1 forkhead box F1 ISO (PMID:19500772) RGD PMID:19500772 NCBI chr19:53,012,306...53,016,100
Ensembl chr19:53,012,332...53,016,086
JBrowse link
G Nfia nuclear factor I/A IEA
ISO
GO_REF:0000107
MGI:2449024 (MGI:3715397|PMID:17530927)
Ensembl
RGD
PMID:17530927 GO_REF:0000107, MGI:3715397 NCBI chr 5:116,421,895...116,750,381
Ensembl chr 5:116,420,690...116,751,416
JBrowse link
G Nphp3 nephrocystin 3 ISO (PMID:18371931) RGD PMID:18371931 NCBI chr 8:112,526,553...112,575,745
Ensembl chr 8:112,526,553...112,575,745
JBrowse link
G Pax2 paired box 2 ISS
ISO
GO_REF:0000024
(MGI:3833510|PMID:17881463)
UniProt
RGD
PMID:17881463 GO_REF:0000024, MGI:3833510 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Sox17 SRY-box transcription factor 17 ISO (PMID:20960469) RGD PMID:20960469 NCBI chr 5:14,890,318...14,895,907
Ensembl chr 5:14,890,408...14,895,907
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO MGI:1923615 (MGI:4848001|PMID:20881014) RGD PMID:20881014 MGI:4848001 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Tbx18 T-box transcription factor 18 ISO (PMID:26235987)
MGI:98371 (MGI:4848001|PMID:20881014)
RGD PMID:20881014, PMID:26235987 MGI:4848001 NCBI chr 8:95,359,354...95,387,363
Ensembl chr 8:95,359,354...95,387,363
JBrowse link
BMP signaling pathway involved in ureter morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEA
ISO
ISS
GO_REF:0000107
(MGI:3710018|PMID:17442697)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17442697 GO_REF:0000024, GO_REF:0000107, MGI:3710018 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
mesenchymal cell proliferation involved in ureter development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEA
ISO
GO_REF:0000107
(PMID:17442697)
Ensembl
RGD
PMID:17442697 GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
negative regulation of mesenchymal cell proliferation involved in ureter development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:12399320)
Ensembl
UniProt
RGD
PMID:12399320 GO_REF:0000024, GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
negative regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule IEA
ISO
ISS
GO_REF:0000107
(MGI:2388350|PMID:12399320)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12399320 GO_REF:0000024, GO_REF:0000107, MGI:2388350 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
positive regulation of mesenchymal cell proliferation involved in ureter development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule IEA
ISO
ISS
GO_REF:0000107
(MGI:2388350|PMID:12399320)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12399320 GO_REF:0000024, GO_REF:0000107, MGI:2388350 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Six1 SIX homeobox 1 ISO MGI:1923615 (MGI:4437379|PMID:20110314) RGD PMID:20110314 MGI:4437379 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Tbx18 T-box transcription factor 18 ISO MGI:102780 (MGI:4437379|PMID:20110314) RGD PMID:20110314 MGI:4437379 NCBI chr 8:95,359,354...95,387,363
Ensembl chr 8:95,359,354...95,387,363
JBrowse link
positive regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule IEA
ISO
ISS
GO_REF:0000107
(MGI:2388350|PMID:12399320)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12399320 GO_REF:0000024, GO_REF:0000107, MGI:2388350 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
ureter epithelial cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEA
ISO
ISS
GO_REF:0000107
(MGI:3710018|PMID:17442697)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17442697 GO_REF:0000024, GO_REF:0000107, MGI:3710018 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
ureter maturation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 ISO MGI:1857891 (MGI:4949948|PMID:21521737) RGD PMID:21521737 MGI:4949948 NCBI chr 8:77,640,234...77,719,488
Ensembl chr 8:77,640,222...77,719,489
JBrowse link
G Gata3 GATA binding protein 3 ISO MGI:3719568 (MGI:4949948|PMID:21521737) RGD PMID:21521737 MGI:4949948 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
JBrowse link
G Pax2 paired box 2 ISS
ISO
GO_REF:0000024
(MGI:3833510|PMID:17881463)
UniProt
RGD
PMID:17881463 GO_REF:0000024, MGI:3833510 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Ret ret proto-oncogene ISO MGI:2136894 (MGI:4949948|PMID:21521737) RGD PMID:21521737 MGI:4949948 NCBI chr 4:150,202,170...150,249,196
Ensembl chr 4:150,202,058...150,244,372
JBrowse link
ureter morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Emx2 empty spiracles homeobox 2 ISO MGI:95457|MGI:95663|MGI:97486|MGI:99783 (MGI:5085923|PMID:21731775) RGD PMID:21731775 MGI:5085923 NCBI chr 1:280,633,938...280,640,946
Ensembl chr 1:280,633,938...280,640,946
JBrowse link
G Gata3 GATA binding protein 3 ISO MGI:95388|MGI:95457|MGI:97486|MGI:99783 (MGI:5085923|PMID:21731775) RGD PMID:21731775 MGI:5085923 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
JBrowse link
G Lhx1 LIM homeobox 1 ISO MGI:95388|MGI:95457|MGI:95663|MGI:97486 (MGI:5085923|PMID:21731775) RGD PMID:21731775 MGI:5085923 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
JBrowse link
G Lzts2 leucine zipper tumor suppressor 2 IEA
ISO
GO_REF:0000107
MGI:5302222 (MGI:5297624|PMID:21949185)
Ensembl
RGD
PMID:21949185 GO_REF:0000107, MGI:5297624 NCBI chr 1:264,765,256...264,776,553
Ensembl chr 1:264,768,105...264,776,616
JBrowse link
G Mecom MDS1 and EVI1 complex locus ISO MGI:95388|MGI:95663|MGI:97486|MGI:99783 (MGI:5085923|PMID:21731775) RGD PMID:21731775 MGI:5085923 NCBI chr 2:117,396,084...117,993,604
Ensembl chr 2:117,396,007...117,454,769
JBrowse link
G Pax2 paired box 2 ISO MGI:95388|MGI:95457|MGI:95663|MGI:99783 (MGI:5085923|PMID:21731775), (PMID:1723950) RGD PMID:1723950, PMID:21731775 MGI:5085923 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Sox8 SRY-box transcription factor 8 ISS
ISO
GO_REF:0000024
MGI:98371 (MGI:4939090|PMID:21212101)
UniProt
RGD
PMID:21212101 GO_REF:0000024, MGI:4939090 NCBI chr10:14,932,348...14,937,336
Ensembl chr10:14,932,348...14,937,336
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO MGI:98370 (MGI:4939090|PMID:21212101) RGD PMID:21212101 MGI:4939090 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
ureter smooth muscle cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IEA
ISO
ISS
GO_REF:0000107
(MGI:3710018|PMID:17442697)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17442697 GO_REF:0000024, GO_REF:0000107, MGI:3710018 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Six1 SIX homeobox 1 ISO MGI:2655195 (MGI:4437379|PMID:20110314) RGD PMID:20110314 MGI:4437379 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO MGI:2176205|MGI:2385468 (MGI:4848001|PMID:20881014) RGD PMID:20881014 MGI:4848001 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Tshz3 teashirt zinc finger homeobox 3 ISO (MGI:3806378|PMID:18776146) RGD PMID:18776146 MGI:3806378 NCBI chr 1:92,703,180...92,775,020
Ensembl chr 1:92,703,080...92,774,975
JBrowse link
ureter urothelium development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 ISS
ISO
GO_REF:0000024
(MGI:3826342|PMID:18835385)
UniProt
RGD
PMID:18835385 GO_REF:0000024, MGI:3826342 NCBI chr 6:35,314,431...35,321,458
Ensembl chr 6:35,314,444...35,321,667
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO (PMID:21512138) RGD PMID:21512138 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    multicellular organismal process 9047
      multicellular organism development 5743
        tube development 1210
          ureter development 20
            mesenchymal cell proliferation involved in ureter development + 4
            ureter maturation 4
            ureter morphogenesis + 9
            ureter smooth muscle development + 5
            ureter urothelium development + 3
Path 2
Term Annotations click to browse term
  biological_process 20020
    developmental process 6826
      anatomical structure development 6268
        multicellular organism development 5743
          system development 5279
            urogenital system development 432
              renal system development 382
                ureter development 20
                  mesenchymal cell proliferation involved in ureter development + 4
                  ureter maturation 4
                  ureter morphogenesis + 9
                  ureter smooth muscle development + 5
                  ureter urothelium development + 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.