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ONTOLOGY REPORT - ANNOTATIONS


Term:metanephric collecting duct development
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Accession:GO:0072205 term browser browse the term
Definition:The process whose specific outcome is the progression of a collecting duct in the metanephros over time, from its formation to the mature structure. The collecting duct responds to vasopressin and aldosterone to regulate water, electrolyte and acid-base balance. The collecting duct is the final common path through which urine flows before entering the ureter and then emptying into the bladder.


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metanephric collecting duct development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1b1 aldo-keto reductase family 1 member B ISO MGI:MGI:2183239 (MGI:MGI:3628967|PMID:16449351) RGD PMID:16449351 MGI:MGI:3628967 NCBI chr 4:61,706,866...61,720,959
Ensembl chr 4:61,706,864...61,720,956
JBrowse link
G Aqp2 aquaporin 2 IEA
ISO
GO_REF:0000107
(PMID:18618131)
Ensembl
RGD
PMID:18618131 GO_REF:0000107 NCBI chr 7:141,237,802...141,242,837
Ensembl chr 7:141,237,768...141,245,165
JBrowse link
G Bmp4 bone morphogenetic protein 4 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:3710018|PMID:17442697)
Ensembl
UniProt
RGD
PMID:17442697 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3710018 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Calb1 calbindin 1 ISO (PMID:18618131) RGD PMID:18618131 NCBI chr 5:29,538,380...29,562,774
Ensembl chr 5:29,538,380...29,562,773
JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 ISO MGI:MGI:3757646 (MGI:MGI:3722974|PMID:17765678) RGD PMID:17765678 MGI:MGI:3722974 NCBI chr15:120,213...230,312
Ensembl chr15:120,372...228,977
JBrowse link
G Pax2 paired box 2 ISO
ISS
(MGI:MGI:1889171|PMID:10980123)
GO_REF:0000024
RGD
UniProt
PMID:10980123 GO_REF:0000024, MGI:MGI:1889171 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting ISO (PMID:11891195) RGD PMID:11891195 NCBI chr10:13,914,057...13,962,008
Ensembl chr10:13,915,214...13,962,008
JBrowse link
G Ptch1 patched 1 ISO (PMID:17850284) RGD PMID:17850284 NCBI chr17:1,032,242...1,085,885
Ensembl chr17:1,029,048...1,093,873
JBrowse link
G Shh sonic hedgehog signaling molecule ISO
IEA
(PMID:17850284)
GO_REF:0000107
RGD
Ensembl
PMID:17850284 GO_REF:0000107 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Wnt7b Wnt family member 7B ISO MGI:MGI:3793280 (MGI:MGI:3821953|PMID:19060336) RGD PMID:19060336 MGI:MGI:3821953 NCBI chr 7:126,423,418...126,465,724
Ensembl chr 7:126,420,656...126,465,723
JBrowse link
negative regulation of apoptotic process involved in metanephric collecting duct development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 ISO
ISS
(MGI:MGI:3704067|PMID:17314325)
GO_REF:0000024
RGD
UniProt
PMID:17314325 GO_REF:0000024, MGI:MGI:3704067 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Pax8 paired box 8 ISO
ISS
(MGI:MGI:3704067|PMID:17314325)
GO_REF:0000024
RGD
UniProt
PMID:17314325 GO_REF:0000024, MGI:MGI:3704067 NCBI chr 3:1,527,316...1,586,019
Ensembl chr 3:1,527,279...1,584,946
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    multicellular organismal process 9046
      multicellular organism development 5744
        tube development 1209
          collecting duct development 17
            metanephric collecting duct development 11
              apoptotic process involved in metanephric collecting duct development + 2
Path 2
Term Annotations click to browse term
  biological_process 20028
    developmental process 6827
      anatomical structure development 6269
        multicellular organism development 5744
          system development 5280
            urogenital system development 432
              renal system development 382
                kidney development 368
                  collecting duct development 17
                    metanephric collecting duct development 11
                      apoptotic process involved in metanephric collecting duct development + 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.