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ONTOLOGY REPORT - ANNOTATIONS


Term:pyridine-containing compound metabolic process
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Accession:GO:0072524 term browser browse the term
Definition:The chemical reactions and pathways involving a pyridine-containing compound, i.e. any compound that contains pyridine or a formal derivative thereof.
Synonyms:exact_synonym: pyridine and derivative metabolic process;   pyridine-containing compound metabolism


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'de novo' NAD biosynthetic process from tryptophan term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Haao 3-hydroxyanthranilate 3,4-dioxygenase JBrowse link 17 83,831,348 83,848,981 RGD:2290270
G Ido1 indoleamine 2,3-dioxygenase 1 JBrowse link 8 24,584,133 24,596,952 RGD:2290270
G Ido2 indoleamine 2,3-dioxygenase 2 JBrowse link 8 24,531,892 24,576,414 RGD:2290270
NAD biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Afmid arylformamidase JBrowse link 11 117,825,503 117,839,908 RGD:2290270
G Aspdh aspartate dehydrogenase domain containing JBrowse link 7 44,465,435 44,467,751 RGD:2290270
G Haao 3-hydroxyanthranilate 3,4-dioxygenase JBrowse link 17 83,831,348 83,848,981 RGD:2290270
G Kynu kynureninase JBrowse link 2 43,555,258 43,683,048 RGD:2290270
G Nadsyn1 NAD synthetase 1 JBrowse link 7 143,795,589 143,822,862 RGD:2290270
G Nampt nicotinamide phosphoribosyltransferase JBrowse link 12 32,820,335 32,853,369 RGD:2290270
G Naprt nicotinate phosphoribosyltransferase JBrowse link 15 75,890,963 75,894,481 RGD:2290270
G Nmnat1 nicotinamide nucleotide adenylyltransferase 1 JBrowse link 4 149,467,569 149,485,210 RGD:2290270
G Nmnat2 nicotinamide nucleotide adenylyltransferase 2 JBrowse link 1 152,954,781 153,119,266 RGD:2290270
G Nmnat3 nicotinamide nucleotide adenylyltransferase 3 JBrowse link 9 98,287,433 98,420,533 RGD:2290270
G Qprt quinolinate phosphoribosyltransferase JBrowse link 7 127,107,770 127,122,029 RGD:2290270
NAD catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Art2b ADP-ribosyltransferase 2b JBrowse link 7 101,575,729 101,585,591 RGD:2290270
G Nudt12 nudix (nucleoside diphosphate linked moiety X)-type motif 12 JBrowse link 17 59,000,107 59,013,367 RGD:2290270
G Nudt17 nudix (nucleoside diphosphate linked moiety X)-type motif 17 JBrowse link 3 96,705,892 96,708,916 RGD:2290270
G Sarm1 sterile alpha and HEAT/Armadillo motif containing 1 JBrowse link 11 78,470,273 78,497,816 RGD:2290270
NAD salvage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Naprt nicotinate phosphoribosyltransferase JBrowse link 15 75,890,963 75,894,481 RGD:2290270
NADP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G G6pdx glucose-6-phosphate dehydrogenase X-linked JBrowse link X 74,409,483 74,428,880 RGD:2290270
G Idh2 isocitrate dehydrogenase 2 (NADP+), mitochondrial JBrowse link 7 80,094,845 80,118,608 RGD:2290270
G Nadk NAD kinase JBrowse link 4 155,562,381 155,591,001 RGD:2290270
G Nadk2 NAD kinase 2, mitochondrial JBrowse link 15 9,071,260 9,110,496 RGD:2290270
NADP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aspdh aspartate dehydrogenase domain containing JBrowse link 7 44,465,435 44,467,751 RGD:2290270
G Ncf1 neutrophil cytosolic factor 1 JBrowse link 5 134,220,053 134,229,628 RGD:2290270
G Ncf2 neutrophil cytosolic factor 2 JBrowse link 1 152,800,153 152,836,990 RGD:2290270
G Nudt12 nudix (nucleoside diphosphate linked moiety X)-type motif 12 JBrowse link 17 59,000,107 59,013,367 RGD:2290270
G Nudt13 nudix (nucleoside diphosphate linked moiety X)-type motif 13 JBrowse link 14 20,294,679 20,317,584 RGD:2290270
G Nudt17 nudix (nucleoside diphosphate linked moiety X)-type motif 17 JBrowse link 3 96,705,892 96,708,916 RGD:2290270
negative regulation of quinolinate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acmsd amino carboxymuconate semialdehyde decarboxylase JBrowse link 1 127,729,413 127,767,564 RGD:2290270
nicotinamide nucleotide metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Naxe NAD(P)HX epimerase JBrowse link 3 88,056,520 88,058,542 RGD:2290270
nicotinamide riboside catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mtap methylthioadenosine phosphorylase JBrowse link 4 89,137,370 89,181,090 RGD:9068941
G Pnp2 purine-nucleoside phosphorylase 2 JBrowse link 14 50,956,141 50,964,751 RGD:9068941
nicotinate nucleotide salvage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Naprt nicotinate phosphoribosyltransferase JBrowse link 15 75,890,963 75,894,481 RGD:2290270
pyridine nucleotide biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aspdh aspartate dehydrogenase domain containing JBrowse link 7 44,465,435 44,467,751 RGD:2290270
G Haao 3-hydroxyanthranilate 3,4-dioxygenase JBrowse link 17 83,831,348 83,848,981 RGD:2290270
G Kmo kynurenine 3-monooxygenase (kynurenine 3-hydroxylase) JBrowse link 1 175,632,193 175,660,853 RGD:2290270
G Kynu kynureninase JBrowse link 2 43,555,258 43,683,048 RGD:2290270
G Nampt nicotinamide phosphoribosyltransferase JBrowse link 12 32,820,335 32,853,369 RGD:2290270
G Naprt nicotinate phosphoribosyltransferase JBrowse link 15 75,890,963 75,894,481 RGD:2290270
G Nmnat2 nicotinamide nucleotide adenylyltransferase 2 JBrowse link 1 152,954,781 153,119,266 RGD:2290270
G Nmnat3 nicotinamide nucleotide adenylyltransferase 3 JBrowse link 9 98,287,433 98,420,533 RGD:2290270
G Nmrk1 nicotinamide riboside kinase 1 JBrowse link 19 18,632,016 18,652,428 RGD:2290270
G Nmrk2 nicotinamide riboside kinase 2 JBrowse link 10 81,198,170 81,202,265 RGD:2290270
G Qprt quinolinate phosphoribosyltransferase JBrowse link 7 127,107,770 127,122,029 RGD:2290270
pyridoxal 5'-phosphate salvage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pdxk pyridoxal (pyridoxine, vitamin B6) kinase JBrowse link 10 78,436,747 78,464,948 RGD:2290270
pyridoxal phosphate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pdxk pyridoxal (pyridoxine, vitamin B6) kinase JBrowse link 10 78,436,747 78,464,948 RGD:2290270
G Pnpo pyridoxine 5'-phosphate oxidase JBrowse link 11 96,937,816 96,944,019 RGD:2290270
pyridoxal phosphate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pdxp pyridoxal (pyridoxine, vitamin B6) phosphatase JBrowse link 15 78,912,160 78,919,517 RGD:2290270
pyridoxine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pnpo pyridoxine 5'-phosphate oxidase JBrowse link 11 96,937,816 96,944,019 RGD:2290270
quinolinate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Haao 3-hydroxyanthranilate 3,4-dioxygenase JBrowse link 17 83,831,348 83,848,981 RGD:2290270
G Htt huntingtin JBrowse link 5 34,761,721 34,912,534 RGD:2290270
G Kmo kynurenine 3-monooxygenase (kynurenine 3-hydroxylase) JBrowse link 1 175,632,193 175,660,853 RGD:2290270
G Kynu kynureninase JBrowse link 2 43,555,258 43,683,048 RGD:2290270
quinolinate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Qprt quinolinate phosphoribosyltransferase JBrowse link 7 127,107,770 127,122,029 RGD:2290270
quinolinate metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acmsd amino carboxymuconate semialdehyde decarboxylase JBrowse link 1 127,729,413 127,767,564 RGD:2290270
G Haao 3-hydroxyanthranilate 3,4-dioxygenase JBrowse link 17 83,831,348 83,848,981 RGD:2290270
G Qprt quinolinate phosphoribosyltransferase JBrowse link 7 127,107,770 127,122,029 RGD:2290270

Term paths to the root
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Term Annotations click to browse term
  biological_process 23311
    metabolic process 11217
      nitrogen compound metabolic process 9321
        cellular nitrogen compound metabolic process 5944
          pyridine-containing compound metabolic process 35
            2,5-dihydroxypyridine metabolic process + 0
            aspyridone A metabolic process + 0
            aspyridone B metabolic process + 0
            nicotinamide metabolic process + 0
            nicotinate metabolic process + 0
            picolinic acid metabolic process + 0
            pyridine metabolic process + 0
            pyridine nucleoside metabolic process + 2
            pyridine nucleotide metabolic process + 28
            pyridine-containing compound biosynthetic process + 24
            pyridine-containing compound catabolic process + 12
            quinolinate metabolic process + 6
            vitamin B6 metabolic process + 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.