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ONTOLOGY REPORT - ANNOTATIONS


Term:pyridine-containing compound metabolic process
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Accession:GO:0072524 term browser browse the term
Definition:The chemical reactions and pathways involving a pyridine-containing compound, i.e. any compound that contains pyridine or a formal derivative thereof.
Synonyms:exact_synonym: pyridine and derivative metabolic process;   pyridine-containing compound metabolism


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'de novo' NAD biosynthetic process from tryptophan term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AFMID arylformamidase JBrowse link 12 3,759,688 3,785,829 RGD:14298760
G HAAO 3-hydroxyanthranilate 3,4-dioxygenase JBrowse link 3 97,580,756 97,595,033 RGD:14298760
G IDO1 indoleamine 2,3-dioxygenase 1 JBrowse link 17 9,245,283 9,260,140 RGD:14298760
G IDO2 indoleamine 2,3-dioxygenase 2 JBrowse link 17 9,277,039 9,344,405 RGD:14298760
G KMO kynurenine 3-monooxygenase JBrowse link 10 12,442,877 12,489,417 RGD:14298760
G KYNU kynureninase JBrowse link 15 8,847,335 8,982,951 RGD:14298760
NAD biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AFMID arylformamidase JBrowse link 12 3,759,688 3,785,829 RGD:14298760
G EEF1D eukaryotic translation elongation factor 1 delta JBrowse link 4 969,532 982,250 RGD:14298760
G HAAO 3-hydroxyanthranilate 3,4-dioxygenase JBrowse link 3 97,580,756 97,595,033 RGD:9068941
G JOSD2 Josephin domain containing 2 JBrowse link 6 55,335,466 55,341,019 RGD:14298760
G KYNU kynureninase JBrowse link 15 8,847,335 8,982,951 RGD:9068941
G NADSYN1 NAD synthetase 1 JBrowse link 2 2,334,793 2,372,356 RGD:14298760
G NAMPT nicotinamide phosphoribosyltransferase JBrowse link 9 106,119,896 106,162,126 RGD:14298760
G NAPRT nicotinate phosphoribosyltransferase JBrowse link 4 983,428 986,750 RGD:14298760
G NMNAT1 nicotinamide nucleotide adenylyltransferase 1 JBrowse link 6 70,271,296 70,307,403 RGD:14298760
G NMNAT2 nicotinamide nucleotide adenylyltransferase 2 JBrowse link 9 124,495,464 124,697,911 RGD:14298760
G NMNAT3 nicotinamide nucleotide adenylyltransferase 3 JBrowse link 13 80,431,405 80,556,808 RGD:14298760
G QPRT quinolinate phosphoribosyltransferase JBrowse link 3 17,987,223 18,001,712 RGD:14298760
NAD catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NUDT12 nudix hydrolase 12 JBrowse link 2 109,044,946 109,059,721 RGD:14298760
G NUDT17 nudix hydrolase 17 JBrowse link 4 99,472,347 99,477,953 RGD:14298760
G SARM1 sterile alpha and TIR motif containing 1 JBrowse link 12 44,654,364 44,676,942 RGD:14298760
NADP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G G6PD glucose-6-phosphate dehydrogenase JBrowse link X 125,029,147 125,041,040 RGD:9068941
G IDH2 isocitrate dehydrogenase (NADP(+)) 2 JBrowse link 7 55,654,298 55,675,571 RGD:9068941
G NADK NAD kinase JBrowse link 6 63,846,650 63,864,137 RGD:14298760
G NADK2 NAD kinase 2, mitochondrial JBrowse link 16 21,507,422 21,557,312 RGD:14298760
NADP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NUDT12 nudix hydrolase 12 JBrowse link 2 109,044,946 109,059,721 RGD:14298760
G NUDT13 nudix hydrolase 13 JBrowse link 14 75,918,056 75,958,187 RGD:14298760
G NUDT17 nudix hydrolase 17 JBrowse link 4 99,472,347 99,477,953 RGD:14298760
negative regulation of quinolinate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACMSD aminocarboxymuconate semialdehyde decarboxylase JBrowse link 15 17,121,950 17,164,005 RGD:14298760
nicotinamide nucleotide metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NAXD NAD(P)HX dehydratase JBrowse link 11 77,210,164 77,230,687 RGD:14298760
G NAXE NAD(P)HX epimerase JBrowse link 4 93,493,234 93,495,912 RGD:14298760
nicotinamide riboside catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MTAP methylthioadenosine phosphorylase JBrowse link 1 200,882,954 200,934,389 RGD:9068941
G PNP purine nucleoside phosphorylase JBrowse link 7 78,426,838 78,447,029 RGD:14298760
pyridoxal 5'-phosphate salvage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PDXK pyridoxal kinase JBrowse link 13 206,676,905 206,699,047 RGD:14298760
pyridoxal phosphate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PNPO pyridoxamine 5'-phosphate oxidase JBrowse link 12 24,192,848 24,201,419 RGD:14298760
pyridoxal phosphate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PDXP pyridoxal phosphatase JBrowse link 5 10,162,642 10,169,726 RGD:14298760
pyridoxine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G PNPO pyridoxamine 5'-phosphate oxidase JBrowse link 12 24,192,848 24,201,419 RGD:14298760
quinolinate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HAAO 3-hydroxyanthranilate 3,4-dioxygenase JBrowse link 3 97,580,756 97,595,033 RGD:14298760
G HTT huntingtin JBrowse link 8 1,809,768 1,934,002 RGD:9068941
G KMO kynurenine 3-monooxygenase JBrowse link 10 12,442,877 12,489,417 RGD:14298760
G KYNU kynureninase JBrowse link 15 8,847,335 8,982,951 RGD:14298760
quinolinate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G QPRT quinolinate phosphoribosyltransferase JBrowse link 3 17,987,223 18,001,712 RGD:14298760
quinolinate metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HAAO 3-hydroxyanthranilate 3,4-dioxygenase JBrowse link 3 97,580,756 97,595,033 RGD:14298760
G QPRT quinolinate phosphoribosyltransferase JBrowse link 3 17,987,223 18,001,712 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16412
    metabolic process 10434
      nitrogen compound metabolic process 8776
        cellular nitrogen compound metabolic process 5502
          pyridine-containing compound metabolic process 32
            2,5-dihydroxypyridine metabolic process + 0
            aspyridone A metabolic process + 0
            aspyridone B metabolic process + 0
            nicotinamide metabolic process + 0
            nicotinate metabolic process + 0
            picolinic acid metabolic process + 0
            pyridine metabolic process + 0
            pyridine nucleoside metabolic process + 2
            pyridine nucleotide metabolic process + 25
            pyridine-containing compound biosynthetic process + 23
            pyridine-containing compound catabolic process + 8
            quinolinate metabolic process + 6
            vitamin B6 metabolic process + 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.