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ONTOLOGY REPORT - ANNOTATIONS


Term:perineuronal net
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Accession:GO:0072534 term browser browse the term
Definition:A dense extracellular matrix (ECM) that forms around many neuronal cell bodies and dendrites late in development and is responsible for synaptic stabilization in the adult brain.
Synonyms:exact_synonym: PNN


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perineuronal net term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAN aggrecan ISO RGD PMID:18364019 RGD:2315810 NCBI chr15:67,492,494...67,563,265
Ensembl chr15:86,733,853...86,771,420
JBrowse link
G BCAN brevican ISO MMO:0000669 RGD PMID:16644727 RGD:9589827 NCBI chr 1:131,985,310...132,003,068
Ensembl chr 1:135,808,783...135,826,344
JBrowse link
G NCAN neurocan ISO MMO:0000669,MMO:0000662 RGD PMID:16644727 RGD:9589827 NCBI chr19:18,650,522...18,690,882
Ensembl chr19:19,657,766...19,691,998
JBrowse link
G PTPRZ1 protein tyrosine phosphatase receptor type Z1 ISO (MGI:MGI:1858374|PMID:10793198) MGI
RGD
PMID:10793198, PMID:16644727 MGI:MGI:1858374, RGD:9589827 NCBI chr 7:113,882,557...114,073,283
Ensembl chr 7:126,569,630...126,758,155
JBrowse link
G TNR tenascin R ISO (MGI:MGI:1337730|PMID:10341229) MGI PMID:10341229 MGI:MGI:1337730 NCBI chr 1:150,826,892...151,257,301
Ensembl chr 1:154,532,582...154,615,538
JBrowse link
G VCAN versican ISO MMO:0000669,MMO:0000662 RGD PMID:16644727 RGD:9589827 NCBI chr 5:31,699,278...31,810,169
Ensembl chr 5:32,019,709...32,130,351
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 12626
    cellular anatomical entity 12523
      extracellular matrix 257
        collagen-containing extracellular matrix 180
          perisynaptic extracellular matrix 7
            perineuronal net 6
Path 2
Term Annotations click to browse term
  cellular_component 12626
    cellular anatomical entity 12523
      extracellular region 1257
        extracellular matrix 257
          collagen-containing extracellular matrix 180
            synapse-associated extracellular matrix 8
              perisynaptic extracellular matrix 7
                perineuronal net 6
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.