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ONTOLOGY REPORT - ANNOTATIONS


Term:perineuronal net
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Accession:GO:0072534 term browser browse the term
Definition:A dense extracellular matrix (ECM) that forms around many neuronal cell bodies and dendrites late in development and is responsible for synaptic stabilization in the adult brain.
Synonyms:exact_synonym: PNN


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perineuronal net term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAN aggrecan ISO RGD PMID:18364019 RGD:2315810 NCBI chr15:88,803,436...88,875,353
Ensembl chr15:88,803,436...88,875,354
Ensembl chr15:88,803,436...88,875,354
JBrowse link
G BCAN brevican ISO MMO:0000669 RGD PMID:16644727 RGD:9589827 NCBI chr 1:156,642,117...156,659,528
Ensembl chr 1:156,641,390...156,659,532
JBrowse link
G NCAN neurocan ISO MMO:0000669,MMO:0000662 RGD PMID:16644727 RGD:9589827 NCBI chr19:19,211,958...19,252,233
Ensembl chr19:19,211,958...19,252,233
JBrowse link
G PTPRZ1 protein tyrosine phosphatase receptor type Z1 IEA Ensembl GO_REF:0000107 NCBI chr 7:121,873,161...122,062,036
Ensembl chr 7:121,873,089...122,062,036
JBrowse link
G TNR tenascin R IEA Ensembl GO_REF:0000107 NCBI chr 1:175,315,194...175,743,702
Ensembl chr 1:175,315,194...175,743,616
JBrowse link
G VCAN versican ISO MMO:0000669,MMO:0000662 RGD PMID:16644727 RGD:9589827 NCBI chr 5:83,471,744...83,582,302
Ensembl chr 5:83,471,618...83,582,303
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19299
    cellular anatomical entity 19094
      extracellular matrix 593
        collagen-containing extracellular matrix 454
          perisynaptic extracellular matrix 7
            perineuronal net 6
Path 2
Term Annotations click to browse term
  cellular_component 19299
    cellular anatomical entity 19094
      extracellular region 4519
        extracellular matrix 593
          collagen-containing extracellular matrix 454
            synapse-associated extracellular matrix 8
              perisynaptic extracellular matrix 7
                perineuronal net 6
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.