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ONTOLOGY REPORT - ANNOTATIONS


Term:perineuronal net
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Accession:GO:0072534 term browser browse the term
Definition:A dense extracellular matrix (ECM) that forms around many neuronal cell bodies and dendrites late in development and is responsible for synaptic stabilization in the adult brain.
Synonyms:exact_synonym: PNN


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perineuronal net term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 7:79,053,226...79,115,099
Ensembl chr 7:79,053,483...79,115,099
JBrowse link
G Bcan brevican ISO MGI GO_REF:0000096, MGI:MGI:4417868 NCBI chr 3:87,987,531...88,002,175
Ensembl chr 3:87,987,531...88,000,230
JBrowse link
G Ncan neurocan ISO MGI GO_REF:0000096, MGI:MGI:4417868 NCBI chr 8:70,093,085...70,120,863
Ensembl chr 8:70,093,085...70,120,873
JBrowse link
G Ptprz1 protein tyrosine phosphatase, receptor type Z, polypeptide 1 IDA
ISO
(MGI:MGI:1858374|PMID:10793198) MGI
RGD
PMID:10793198 GO_REF:0000096, MGI:MGI:1858374, MGI:MGI:4417868 NCBI chr 6:22,875,315...23,052,916
Ensembl chr 6:22,875,502...23,052,916
JBrowse link
G Tnr tenascin R IDA (MGI:MGI:1337730|PMID:10341229) MGI PMID:10341229 MGI:MGI:1337730 NCBI chr 1:159,523,729...159,931,729
Ensembl chr 1:159,523,769...159,931,729
JBrowse link
G Vcan versican ISO MGI GO_REF:0000096, MGI:MGI:4417868 NCBI chr13:89,655,309...89,743,027
Ensembl chr13:89,655,312...89,742,509
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 23188
    cellular anatomical entity 19110
      extracellular matrix 519
        collagen-containing extracellular matrix 390
          perisynaptic extracellular matrix 7
            perineuronal net 6
Path 2
Term Annotations click to browse term
  cellular_component 23188
    cellular anatomical entity 19110
      extracellular region 2776
        extracellular matrix 519
          collagen-containing extracellular matrix 390
            synapse-associated extracellular matrix 8
              perisynaptic extracellular matrix 7
                perineuronal net 6
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.