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ONTOLOGY REPORT - ANNOTATIONS


Term:perineuronal net
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Accession:GO:0072534 term browser browse the term
Definition:A dense extracellular matrix (ECM) that forms around many neuronal cell bodies and dendrites late in development and is responsible for synaptic stabilization in the adult brain.
Synonyms:exact_synonym: PNN


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perineuronal net term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAN aggrecan ISO RGD PMID:18364019 RGD:2315810 NCBI chr 7:54,449,830...54,520,606
Ensembl chr 7:54,449,588...54,520,153
JBrowse link
G BCAN brevican ISO MMO:0000669 RGD PMID:16644727 RGD:9589827 NCBI chr 4:93,432,331...93,450,895
Ensembl chr 4:93,432,335...93,450,827
JBrowse link
G NCAN neurocan ISO MMO:0000669,MMO:0000662 RGD PMID:16644727 RGD:9589827 NCBI chr 2:58,638,808...58,669,757
Ensembl chr 2:58,638,805...58,669,705
JBrowse link
G PTPRZ1 protein tyrosine phosphatase receptor type Z1 IEA Ensembl GO_REF:0000107 NCBI chr18:25,046,027...25,228,276
Ensembl chr18:25,045,727...25,228,247
JBrowse link
G TNR tenascin R IEA Ensembl GO_REF:0000107 NCBI chr 9:117,365,930...117,790,332
Ensembl chr 9:117,371,828...117,790,243
JBrowse link
G VCAN versican ISO MMO:0000669,MMO:0000662 RGD PMID:16644727 RGD:9589827 NCBI chr 2:91,682,177...91,811,674
Ensembl chr 2:91,358,399...91,811,208
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 16933
    cellular anatomical entity 16845
      extracellular matrix 384
        collagen-containing extracellular matrix 248
          perisynaptic extracellular matrix 7
            perineuronal net 6
Path 2
Term Annotations click to browse term
  cellular_component 16933
    cellular anatomical entity 16845
      extracellular region 1903
        extracellular matrix 384
          collagen-containing extracellular matrix 248
            synapse-associated extracellular matrix 8
              perisynaptic extracellular matrix 7
                perineuronal net 6
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.