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ONTOLOGY REPORT - ANNOTATIONS


Term:neurotransmitter-gated ion channel clustering
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Accession:GO:0072578 term browser browse the term
Definition:The receptor clustering process in which neurotransmitter-gated ion channels are localized to distinct domains in the cell membrane.


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neurotransmitter-gated ion channel clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 JBrowse link 4 110,699,577 111,497,643 RGD:1624291
AMPA glutamate receptor clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:1624291
RGD:1600115
G Dlg4 discs large MAGUK scaffold protein 4 JBrowse link 10 56,625,845 56,655,543 RGD:8554095
RGD:13792537
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 JBrowse link 4 110,699,577 111,497,643 RGD:1624291
G Nlgn1 neuroligin 1 JBrowse link 2 111,057,291 111,973,681 RGD:8553843
RGD:1624291
RGD:1600115
G Shank3 SH3 and multiple ankyrin repeat domains 3 JBrowse link 7 130,474,278 130,534,679 RGD:7349315
RGD:1624291
gamma-aminobutyric acid receptor clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Glrb glycine receptor, beta JBrowse link 2 179,768,040 179,842,612 RGD:1624291
RGD:1600115
G Gphn gephyrin JBrowse link 6 101,327,874 101,859,169 RGD:1624291
RGD:13792537
RGD:1600115
G Lhfpl4 LHFPL tetraspan subfamily member 4 JBrowse link 4 145,117,533 145,147,397 RGD:1600115
RGD:1624291
G Nrxn1 neurexin 1 JBrowse link 6 13,886,757 15,191,660 RGD:1624291
RGD:1600115
glutamate receptor clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Glra3 glycine receptor, alpha 3 JBrowse link 16 37,676,959 37,908,221 RGD:1624291
glycine receptor clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gphn gephyrin JBrowse link 6 101,327,874 101,859,169 RGD:1624291
RGD:13792537
NMDA glutamate receptor clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:1624291
RGD:1600115
G Htr1a 5-hydroxytryptamine receptor 1A JBrowse link 2 36,246,628 36,247,896 RGD:7241017
G Nlgn1 neuroligin 1 JBrowse link 2 111,057,291 111,973,681 RGD:8553605
G Nrxn1 neurexin 1 JBrowse link 6 13,886,757 15,191,660 RGD:1624291
RGD:1600115
G Reln reelin JBrowse link 4 9,347,533 9,774,257 RGD:1624291
RGD:1600115
G Shank3 SH3 and multiple ankyrin repeat domains 3 JBrowse link 7 130,474,278 130,534,679 RGD:1624291
RGD:1600115
positive regulation of AMPA glutamate receptor clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Grip2 glutamate receptor interacting protein 2 JBrowse link 4 123,585,184 123,636,040 RGD:4107359
G Snx27 sorting nexin family member 27 JBrowse link 2 195,738,613 195,821,608 RGD:13508620
G Ssh1 slingshot protein phosphatase 1 JBrowse link 12 48,403,184 48,447,964 RGD:11535133
regulation of AMPA glutamate receptor clustering term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Shank3 SH3 and multiple ankyrin repeat domains 3 JBrowse link 7 130,474,278 130,534,679 RGD:1624291
G Shisa6 shisa family member 6 JBrowse link 10 52,744,069 53,037,853 RGD:1600115
RGD:1624291
G Shisa7 shisa family member 7 JBrowse link 1 72,545,413 72,564,513 RGD:1600115
RGD:1624291
G Slc7a11 solute carrier family 7 member 11 JBrowse link 2 139,453,774 139,528,479 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17968
    cellular process 16127
      cellular component organization 6091
        synapse organization 476
          neurotransmitter-gated ion channel clustering 18
            NMDA glutamate receptor clustering 6
            gamma-aminobutyric acid receptor clustering 4
            glutamate receptor clustering + 12
            glycine receptor clustering 1
Path 2
Term Annotations click to browse term
  biological_process 17968
    localization 6025
      macromolecule localization 2943
        cellular macromolecule localization 1778
          cellular protein localization 1767
            protein localization to membrane 565
              receptor clustering 71
                neurotransmitter-gated ion channel clustering 18
                  NMDA glutamate receptor clustering 6
                  gamma-aminobutyric acid receptor clustering 4
                  glutamate receptor clustering + 12
                  glycine receptor clustering 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.