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ONTOLOGY REPORT - ANNOTATIONS


Term:lytic vacuole organization
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Accession:GO:0080171 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a lytic vacuole.
Synonyms:exact_synonym: lytic vacuole organisation
 narrow_synonym: lytic vacuolar assembly
 related_synonym: lytic vacuole biogenesis;   lytic vacuole organization and biogenesis


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lysosomal lumen acidification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP6AP2 ATPase H+ transporting accessory protein 2 ISO (PMID:32276428) UniProt PMID:32276428 NCBI chr  X:33,026,525...33,052,252
Ensembl chr  X:40,730,677...40,756,209
JBrowse link
G CCDC115 coiled-coil domain containing 115 ISO (PMID:28296633) UniProtKB PMID:28296633 NCBI chr2B:28,624,800...28,629,543 JBrowse link
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISO (PMID:11722572) UniProtKB PMID:11722572
G CLN5 CLN5 intracellular trafficking protein ISO (PMID:11722572) UniProtKB PMID:11722572 NCBI chr13:58,207,542...58,220,697
Ensembl chr13:77,253,203...77,263,759
JBrowse link
G CLN6 CLN6 transmembrane ER protein ISO (PMID:11722572) UniProtKB PMID:11722572 NCBI chr15:47,156,583...47,215,805
Ensembl chr15:65,425,472...65,985,242
JBrowse link
G GRN granulin precursor ISO (PMID:28073925) UniProt PMID:28073925 NCBI chr17:13,046,329...13,054,236
Ensembl chr17:13,211,784...13,219,609
JBrowse link
G PPT1 palmitoyl-protein thioesterase 1 ISO (PMID:11722572) UniProtKB PMID:11722572 NCBI chr 1:39,358,424...39,383,087
Ensembl chr 1:40,683,841...40,708,609
JBrowse link
G SNAPIN SNAP associated protein ISO (MGI:MGI:4879078|PMID:20920792) MGI PMID:20920792 MGI:MGI:4879078 NCBI chr 1:129,014,668...129,018,428
Ensembl chr 1:132,644,320...132,647,095
JBrowse link
G TMEM199 transmembrane protein 199 ISO (PMID:28296633) UniProtKB PMID:28296633 NCBI chr17:28,412,229...28,416,840
Ensembl chr17:28,914,604...28,919,194
JBrowse link
G TMEM9 transmembrane protein 9 ISO (PMID:30374053) UniProt PMID:30374053 NCBI chr 1:176,734,640...176,771,476
Ensembl chr 1:181,037,050...181,056,841
JBrowse link
lysosomal lumen pH elevation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISO (PMID:10924275) UniProtKB PMID:10924275
lysosomal membrane organization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARF1 ADP ribosylation factor 1 ISO RGD PMID:9538255 RGD:9684948 NCBI chr 1:203,484,803...203,501,395
Ensembl chr 1:208,695,615...208,712,105
JBrowse link
lysosome organization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 ISO (PMID:15163665) BHF-UCL PMID:15163665 NCBI chr 9:75,948,831...76,096,136
Ensembl chr 9:104,076,516...104,224,188
JBrowse link
G ACP2 acid phosphatase 2, lysosomal ISO (MGI:MGI:894905|PMID:9228031)
(MGI:MGI:3522374|PMID:15604265)
MGI PMID:9228031, PMID:15604265 MGI:MGI:3522374, MGI:MGI:894905 NCBI chr11:47,185,611...47,195,174
Ensembl chr11:47,738,845...47,748,450
JBrowse link
G AKTIP AKT interacting protein ISO (PMID:18799622) UniProtKB PMID:18799622 NCBI chr16:33,731,652...33,743,571 JBrowse link
G AP3B1 adaptor related protein complex 3 subunit beta 1 ISO (MGI:MGI:1330543|PMID:9931340), (MGI:MGI:6415001|PMID:30786955) MGI PMID:9931340, PMID:30786955 MGI:MGI:1330543, MGI:MGI:6415001 NCBI chr 5:37,015,518...37,305,769
Ensembl chr 5:37,503,162...37,840,205
JBrowse link
G BECN1 beclin 1 ISO (MGI:MGI:3801567|PMID:18497889) MGI PMID:18497889 MGI:MGI:3801567 NCBI chr17:14,493,619...14,507,809
Ensembl chr17:14,719,781...14,733,286
JBrowse link
G CHMP5 charged multivesicular body protein 5 ISO (MGI:MGI:3622513|PMID:16567502) MGI PMID:16567502 MGI:MGI:3622513 NCBI chr 9:33,043,148...33,059,564
Ensembl chr 9:33,851,377...33,867,942
JBrowse link
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISO (MGI:MGI:1343910|PMID:10440905)
(MGI:MGI:3527911|PMID:15588329)
(MGI:MGI:1337525|PMID:10191119), (MGI:MGI:1346962|PMID:10527801)
MGI PMID:10191119, PMID:10440905, PMID:10527801, PMID:15588329 MGI:MGI:1337525, MGI:MGI:1343910, MGI:MGI:1346962, MGI:MGI:3527911
G CLN5 CLN5 intracellular trafficking protein ISO (MGI:MGI:3512689|PMID:15459177) MGI PMID:15459177 MGI:MGI:3512689 NCBI chr13:58,207,542...58,220,697
Ensembl chr13:77,253,203...77,263,759
JBrowse link
G CLN6 CLN6 transmembrane ER protein ISO (MGI:MGI:1203267|PMID:9600738), (MGI:MGI:5751614|PMID:26681805) MGI PMID:9600738, PMID:26681805 MGI:MGI:1203267, MGI:MGI:5751614 NCBI chr15:47,156,583...47,215,805
Ensembl chr15:65,425,472...65,985,242
JBrowse link
G CLN8 CLN8 transmembrane ER and ERGIC protein ISO (MGI:MGI:1333651|PMID:10087069), (MGI:MGI:65559|PMID:8144516), (MGI:MGI:66707|PMID:8160780), (MGI:MGI:71226|PMID:7613514) MGI PMID:7613514, PMID:8144516, PMID:8160780, PMID:10087069 MGI:MGI:1333651, MGI:MGI:65559, MGI:MGI:66707, MGI:MGI:71226 NCBI chr 8:5,587,875...5,606,883
Ensembl chr 8:1,658,694...1,700,754
JBrowse link
G CLVS1 clavesin 1 ISO PMID:19651769 UniProt PMID:19651769 RGD:8553526 NCBI chr 8:57,703,459...57,921,997
Ensembl chr 8:59,252,291...59,630,784
JBrowse link
G CLVS2 clavesin 2 ISO PMID:19651769 UniProt PMID:19651769 RGD:8553526 NCBI chr 6:120,784,849...120,858,655
Ensembl chr 6:124,907,667...124,975,839
JBrowse link
G FAM160A2 family with sequence similarity 160 member A2 ISO (PMID:18799622) UniProtKB PMID:18799622 NCBI chr11:6,345,227...6,368,675
Ensembl chr11:6,027,300...6,050,850
JBrowse link
G GAA glucosidase alpha, acid ISO (PMID:7717400)
(MGI:MGI:1195358|PMID:9384603), (MGI:MGI:1346721|PMID:10547605), (MGI:MGI:2136118|PMID:11328962), (MGI:MGI:3664400|PMID:12115977)
(MGI:MGI:1275872|PMID:9668092), (MGI:MGI:3618942|PMID:15169761)
BHF-UCL
MGI
PMID:7717400, PMID:9384603, PMID:9668092, PMID:10547605, PMID:11328962, PMID:12115977, PMID:15169761 MGI:MGI:1195358, MGI:MGI:1275872, MGI:MGI:1346721, MGI:MGI:2136118, MGI:MGI:3618942, MGI:MGI:3664400 NCBI chr17:74,188,296...74,206,593
Ensembl chr17:79,723,699...79,741,839
JBrowse link
G GNPTAB N-acetylglucosamine-1-phosphate transferase subunits alpha and beta ISO (PMID:21719679) UniProtKB PMID:21719679 NCBI chr12:99,328,026...99,418,151
Ensembl chr12:102,729,615...102,816,560
JBrowse link
G GRN granulin precursor ISO (MGI:MGI:6274951|PMID:27789271) UniProt PMID:27789271 MGI:MGI:6274951 NCBI chr17:13,046,329...13,054,236
Ensembl chr17:13,211,784...13,219,609
JBrowse link
G HEXB hexosaminidase subunit beta ISO (MGI:MGI:1271008|PMID:9645704), (MGI:MGI:78473|PMID:8789434)
(MGI:MGI:83770|PMID:8896570), (MGI:MGI:894634|PMID:9184660)
MGI PMID:8789434, PMID:8896570, PMID:9184660, PMID:9645704 MGI:MGI:1271008, MGI:MGI:78473, MGI:MGI:83770, MGI:MGI:894634 NCBI chr 5:40,589,448...40,625,176
Ensembl chr 5:41,199,681...41,232,693
JBrowse link
G HOOK1 hook microtubule tethering protein 1 ISO (PMID:18799622) UniProtKB PMID:18799622 NCBI chr 1:59,072,565...59,134,191
Ensembl chr 1:60,777,769...60,839,384
JBrowse link
G HOOK2 hook microtubule tethering protein 2 ISO (PMID:18799622) UniProtKB PMID:18799622 NCBI chr19:12,325,578...12,340,754
Ensembl chr19:13,070,289...13,082,612
JBrowse link
G HOOK3 hook microtubule tethering protein 3 ISO (PMID:18799622) UniProtKB PMID:18799622 NCBI chr 8:42,145,427...42,278,727
Ensembl chr 8:39,595,762...39,711,043
JBrowse link
G HPS1 HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 ISO (MGI:MGI:6415001|PMID:30786955) MGI PMID:30786955 MGI:MGI:6415001 NCBI chr10:95,030,626...95,061,415
Ensembl chr10:98,526,113...98,552,922
JBrowse link
G HPS4 HPS4 biogenesis of lysosomal organelles complex 3 subunit 2 ISO (PMID:12663659) UniProtKB PMID:12663659 NCBI chr22:7,513,397...7,545,782
Ensembl chr22:25,236,360...25,268,699
JBrowse link
G IDUA alpha-L-iduronidase ISO (MGI:MGI:4414887|PMID:19751987)
(MGI:MGI:86916|PMID:9097952)
MGI PMID:9097952, PMID:19751987 MGI:MGI:4414887, MGI:MGI:86916 NCBI chr 4:1,102,288...1,120,973
Ensembl chr 4:1,020,582...1,037,877
JBrowse link
G LAMTOR1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 ISO (MGI:MGI:4887551|PMID:19177150) UniProtKB PMID:19177150 MGI:MGI:4887551 NCBI chr11:67,177,580...67,183,631
Ensembl chr11:70,390,141...70,407,246
JBrowse link
G LOC100986229 CUGBP Elav-like family member 6 ISO (MGI:MGI:83770|PMID:8896570), (MGI:MGI:894634|PMID:9184660)
(MGI:MGI:77946|PMID:8747922)
(MGI:MGI:1097747|PMID:9302266), (MGI:MGI:1271008|PMID:9645704), (MGI:MGI:1352198|PMID:10591619), (MGI:MGI:3033296|PMID:14972652)
(MGI:MGI:69059|PMID:7937929), (MGI:MGI:86923|PMID:9103204)
MGI PMID:7937929, PMID:8747922, PMID:8896570, PMID:9103204, PMID:9184660, PMID:9302266, PMID:9645704, PMID:10591619, PMID:14972652 MGI:MGI:1097747, MGI:MGI:1271008, MGI:MGI:1352198, MGI:MGI:3033296, MGI:MGI:69059, MGI:MGI:77946, MGI:MGI:83770, MGI:MGI:86923, MGI:MGI:894634 NCBI chr15:51,235,123...51,326,832 JBrowse link
G LRRK2 leucine rich repeat kinase 2 ISO (PMID:25416817) ParkinsonsUK-UCL PMID:25416817 NCBI chr12:48,343,621...48,488,337
Ensembl chr12:49,205,930...49,350,462
JBrowse link
G LYST lysosomal trafficking regulator ISO (MGI:MGI:1099544|PMID:9368050)
(MGI:MGI:53816|PMID:4697831), (MGI:MGI:53992|PMID:1113502), (MGI:MGI:55104|PMID:6170520), (MGI:MGI:56449|PMID:4031470)
MGI PMID:1113502, PMID:4031470, PMID:4697831, PMID:6170520, PMID:9368050 MGI:MGI:1099544, MGI:MGI:53816, MGI:MGI:53992, MGI:MGI:55104, MGI:MGI:56449 NCBI chr 1:211,229,800...211,451,947
Ensembl chr 1:216,231,824...216,436,293
JBrowse link
G MBTPS1 membrane bound transcription factor peptidase, site 1 ISO (PMID:21719679) UniProtKB PMID:21719679 NCBI chr16:64,719,971...64,783,119
Ensembl chr16:84,063,508...84,126,000
JBrowse link
G MFSD8 major facilitator superfamily domain containing 8 ISO (MGI:MGI:5575728|PMID:24423645)
(MGI:MGI:5751614|PMID:26681805)
MGI PMID:24423645, PMID:26681805 MGI:MGI:5575728, MGI:MGI:5751614 NCBI chr 4:120,087,477...120,137,550
Ensembl chr 4:131,391,361...131,439,590
JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO (PMID:22692423) UniProt PMID:22692423 NCBI chr 1:9,871,700...10,028,704
Ensembl chr 1:11,093,765...11,249,841
JBrowse link
G MYO7A myosin VIIA ISO (PMID:16001398) UniProtKB PMID:16001398 NCBI chr11:72,187,024...72,265,931
Ensembl chr11:75,834,185...75,907,752
JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase ISO (MGI:MGI:3769195|PMID:17712420) MGI PMID:17712420 MGI:MGI:3769195 NCBI chr17:14,772,054...14,780,398
Ensembl chr17:14,996,420...15,004,242
JBrowse link
G PPT1 palmitoyl-protein thioesterase 1 ISO (MGI:MGI:3612221|PMID:16368712)
(MGI:MGI:3654230|PMID:16542649)
MGI PMID:16368712, PMID:16542649 MGI:MGI:3612221, MGI:MGI:3654230 NCBI chr 1:39,358,424...39,383,087
Ensembl chr 1:40,683,841...40,708,609
JBrowse link
G SNAPIN SNAP associated protein ISO (MGI:MGI:4879078|PMID:20920792) MGI PMID:20920792 MGI:MGI:4879078 NCBI chr 1:129,014,668...129,018,428
Ensembl chr 1:132,644,320...132,647,095
JBrowse link
G SPG11 SPG11 vesicle trafficking associated, spatacsin ISO (MGI:MGI:5749311|PMID:26284655) MGI PMID:26284655 MGI:MGI:5749311 NCBI chr15:23,519,311...23,620,532
Ensembl chr15:41,688,081...41,788,616
JBrowse link
G TFEB transcription factor EB ISO (PMID:23434374)
(PMID:22692423)
UniProtKB
UniProt
PMID:22692423, PMID:23434374 NCBI chr 6:41,268,169...41,320,822
Ensembl chr 6:42,574,416...42,627,031
JBrowse link
G TMEM106B transmembrane protein 106B ISO (MGI:MGI:5588048|PMID:25066864) MGI PMID:25066864 MGI:MGI:5588048 NCBI chr 7:12,905,192...12,931,170
Ensembl chr 7:12,250,010...12,270,693
JBrowse link
G TPCN2 two pore segment channel 2 ISO (PMID:25416817) ParkinsonsUK-UCL PMID:25416817 NCBI chr11:64,139,512...64,227,913 JBrowse link
G TPP1 tripeptidyl peptidase 1 ISO (MGI:MGI:3522013|PMID:15483130) MGI PMID:15483130 MGI:MGI:3522013 NCBI chr11:6,744,815...6,751,556
Ensembl chr11:6,427,522...6,434,222
JBrowse link
G VPS18 VPS18 core subunit of CORVET and HOPS complexes ISO (PMID:18799622) UniProtKB PMID:18799622 NCBI chr15:19,836,707...19,846,231
Ensembl chr15:38,086,518...38,095,835
JBrowse link
G VPS35 VPS35 retromer complex component ISO (MGI:MGI:5694519|PMID:26203154) ParkinsonsUK-UCL PMID:26203154 MGI:MGI:5694519 NCBI chr16:26,924,901...26,954,443
Ensembl chr16:45,817,371...45,846,531
JBrowse link
G WASHC5 WASH complex subunit 5 ISO (MGI:MGI:6199426|PMID:30061306) MGI PMID:30061306 MGI:MGI:6199426 NCBI chr 8:121,710,118...121,777,977
Ensembl chr 8:124,461,424...124,529,262
JBrowse link
G ZKSCAN3 zinc finger with KRAB and SCAN domains 3 ISO (PMID:23434374) UniProtKB PMID:23434374 NCBI chr 6:28,157,736...28,174,906
Ensembl chr 6:28,828,298...28,847,596
JBrowse link
negative regulation of lysosome organization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BECN1 beclin 1 ISO RGD PMID:25561470 RGD:11561937 NCBI chr17:14,493,619...14,507,809
Ensembl chr17:14,719,781...14,733,286
JBrowse link
phagolysosome assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CORO1A coronin 1A ISO (PMID:12132654) UniProtKB PMID:12132654 Ensembl chr16:30,550,383...30,556,196 JBrowse link
G MYO7A myosin VIIA ISO (MGI:MGI:2662763|PMID:12743369) MGI PMID:12743369 MGI:MGI:2662763 NCBI chr11:72,187,024...72,265,931
Ensembl chr11:75,834,185...75,907,752
JBrowse link
G P2RX7 purinergic receptor P2X 7 ISO (MGI:MGI:3699774|PMID:11544318) MGI PMID:11544318 MGI:MGI:3699774 NCBI chr12:118,731,761...118,786,039
Ensembl chr12:122,102,888...122,154,068
JBrowse link
G SRPX sushi repeat containing protein X-linked ISO (MGI:MGI:3852261|PMID:19368996) MGI PMID:19368996 MGI:MGI:3852261 NCBI chr  X:30,598,574...30,670,464
Ensembl chr  X:38,303,313...38,378,770
JBrowse link
phagosome-lysosome docking term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISO (MGI:MGI:5698740|PMID:26450516) UniProt PMID:26450516 MGI:MGI:5698740
phagosome-lysosome fusion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISO (MGI:MGI:5698740|PMID:26450516) UniProt PMID:26450516 MGI:MGI:5698740
G PIKFYVE phosphoinositide kinase, FYVE-type zinc finger containing ISO (PMID:28779020)
(MGI:MGI:6103777|PMID:28779020)
UniProt PMID:28779020 MGI:MGI:6103777 NCBI chr2B:95,505,376...95,597,792
Ensembl chr2B:213,628,997...213,721,299
JBrowse link
G PLA2G5 phospholipase A2 group V ISO (MGI:MGI:3841317|PMID:19342668) UniProt PMID:19342668 MGI:MGI:3841317 NCBI chr 1:18,983,104...19,046,834
Ensembl chr 1:20,068,110...20,089,840
JBrowse link
G RAB20 RAB20, member RAS oncogene family ISO (PMID:21255211) UniProtKB PMID:21255211 NCBI chr13:91,660,142...91,698,215
Ensembl chr13:110,778,119...110,815,408
JBrowse link
G RAB34 RAB34, member RAS oncogene family ISO (MGI:MGI:5467668|PMID:23197834)
(PMID:21255211)
ParkinsonsUK-UCL
UniProtKB
PMID:21255211, PMID:23197834 MGI:MGI:5467668 NCBI chr17:28,057,077...28,061,234
Ensembl chr17:28,562,118...28,566,242
JBrowse link
G RAB39A RAB39A, member RAS oncogene family ISO (PMID:21255211) UniProtKB PMID:21255211 NCBI chr11:102,814,825...102,851,700
Ensembl chr11:106,291,348...106,326,587
JBrowse link
G RAB7A RAB7A, member RAS oncogene family ISO (PMID:21255211) UniProtKB PMID:21255211 NCBI chr 3:125,784,604...125,873,051 JBrowse link
G SYT7 synaptotagmin 7 ISO (MGI:MGI:3690533|PMID:16982801) UniProtKB PMID:16982801 MGI:MGI:3690533 NCBI chr11:56,814,694...56,880,439 JBrowse link
G TMEM175 transmembrane protein 175 ISO (MGI:MGI:5693670|PMID:26317472) UniProtKB PMID:26317472 MGI:MGI:5693670 NCBI chr 4:1,049,647...1,074,903
Ensembl chr 4:967,494...993,030
JBrowse link
phagosome-lysosome fusion involved in apoptotic cell clearance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPG11 SPG11 vesicle trafficking associated, spatacsin ISO (MGI:MGI:5749311|PMID:26284655) MGI PMID:26284655 MGI:MGI:5749311 NCBI chr15:23,519,311...23,620,532
Ensembl chr15:41,688,081...41,788,616
JBrowse link
positive regulation of lysosomal membrane permeability term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSPA8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:9038169 RGD:10059368 NCBI chr11:117,890,545...117,895,262
Ensembl chr11:121,809,800...121,815,773
JBrowse link
G MT3 metallothionein 3 ISO (MGI:MGI:4881636|PMID:20544854) UniProtKB PMID:20544854 MGI:MGI:4881636 NCBI chr16:36,875,919...36,877,558 JBrowse link
positive regulation of lysosome organization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GRN granulin precursor ISO (PMID:28073925)
(MGI:MGI:5905514|PMID:28073925)
UniProt PMID:28073925 MGI:MGI:5905514 NCBI chr17:13,046,329...13,054,236
Ensembl chr17:13,211,784...13,219,609
JBrowse link
regulation of lysosomal lumen pH term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRRK2 leucine rich repeat kinase 2 ISO (PMID:22012985) ParkinsonsUK-UCL PMID:22012985 NCBI chr12:48,343,621...48,488,337
Ensembl chr12:49,205,930...49,350,462
JBrowse link
G TASL TLR adaptor interacting with endolysosomal SLC15A4 ISO (PMID:31001245) UniProt PMID:31001245 NCBI chr  X:23,159,321...23,178,192
Ensembl chr  X:30,716,617...30,717,522
JBrowse link
G TMEM165 transmembrane protein 165 ISO (PMID:23569283) UniProtKB PMID:23569283 NCBI chr 4:68,484,896...68,541,808
Ensembl chr 4:75,075,427...75,104,629
JBrowse link
G TMEM175 transmembrane protein 175 ISO (MGI:MGI:5693670|PMID:26317472) UniProtKB PMID:26317472 MGI:MGI:5693670 NCBI chr 4:1,049,647...1,074,903
Ensembl chr 4:967,494...993,030
JBrowse link
G VPS33A VPS33A core subunit of CORVET and HOPS complexes ISO (PMID:28013294) UniProtKB PMID:28013294 NCBI chr12:119,831,693...119,868,132 JBrowse link
regulation of lysosomal membrane permeability term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAPTM4B lysosomal protein transmembrane 4 beta ISO (PMID:26280656) UniProtKB PMID:26280656 NCBI chr 8:94,414,275...94,491,483 JBrowse link
regulation of lysosome organization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAPTM4B lysosomal protein transmembrane 4 beta ISO (PMID:26280656) UniProtKB PMID:26280656 NCBI chr 8:94,414,275...94,491,483 JBrowse link
G TREX1 three prime repair exonuclease 1 ISO (MGI:MGI:5460923|PMID:23160154) MGI PMID:23160154 MGI:MGI:5460923 NCBI chr 3:48,387,762...48,389,693
Ensembl chr 3:49,470,222...49,471,331
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12529
    cellular process 11625
      cellular component organization or biogenesis 4979
        cellular component organization 4899
          organelle organization 3022
            vacuole organization 147
              lytic vacuole organization 66
                lysosome organization + 66
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.