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ONTOLOGY REPORT - ANNOTATIONS


Term:lytic vacuole organization
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Accession:GO:0080171 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a lytic vacuole.
Synonyms:exact_synonym: lytic vacuole organisation
 narrow_synonym: lytic vacuolar assembly
 related_synonym: lytic vacuole biogenesis;   lytic vacuole organization and biogenesis


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lysosomal lumen acidification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP6AP2 ATPase H+ transporting accessory protein 2 IMP (PMID:32276428) UniProt PMID:32276428 NCBI chr  X:40,580,970...40,606,848
Ensembl chr  X:40,579,372...40,606,848
JBrowse link
G CCDC115 coiled-coil domain containing 115 IMP (PMID:28296633) UniProtKB PMID:28296633 NCBI chr 2:130,337,933...130,342,681
Ensembl chr 2:130,337,933...130,342,699
JBrowse link
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin IMP
IBA
(PMID:11722572)
(PMID:21873635)
UniProtKB
GO_Central
PMID:11722572, PMID:21873635 NCBI chr16:28,466,653...28,492,082
Ensembl chr16:28,456,371...28,492,098
Ensembl chr16:28,456,371...28,492,098
JBrowse link
G CLN5 CLN5 intracellular trafficking protein IMP (PMID:11722572) UniProtKB PMID:11722572 NCBI chr13:76,992,081...77,005,117
Ensembl chr13:76,990,660...77,019,143
JBrowse link
G CLN6 CLN6 transmembrane ER protein IMP (PMID:11722572) UniProtKB PMID:11722572 NCBI chr15:68,206,992...68,229,728
Ensembl chr15:68,206,992...68,257,211
JBrowse link
G GRN granulin precursor IMP (PMID:28073925) UniProt PMID:28073925 NCBI chr17:44,345,302...44,353,106
Ensembl chr17:44,345,246...44,353,106
JBrowse link
G PPT1 palmitoyl-protein thioesterase 1 IMP (PMID:11722572) UniProtKB PMID:11722572 NCBI chr 1:40,071,461...40,097,252
Ensembl chr 1:40,072,710...40,097,260
Ensembl chr 1:40,072,710...40,097,260
JBrowse link
G SNAPIN SNAP associated protein IEA Ensembl GO_REF:0000107 NCBI chr 1:153,658,654...153,661,852
Ensembl chr 1:153,658,703...153,661,852
JBrowse link
G TMEM199 transmembrane protein 199 IMP (PMID:28296633) UniProtKB PMID:28296633 NCBI chr17:28,357,647...28,363,683
Ensembl chr17:28,357,642...28,363,683
JBrowse link
G TMEM9 transmembrane protein 9 IDA (PMID:30374053) UniProt PMID:30374053 NCBI chr 1:201,134,772...201,171,625
Ensembl chr 1:201,134,772...201,171,574
JBrowse link
lysosomal lumen pH elevation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin IDA (PMID:10924275) UniProtKB PMID:10924275 NCBI chr16:28,466,653...28,492,082
Ensembl chr16:28,456,371...28,492,098
Ensembl chr16:28,456,371...28,492,098
JBrowse link
lysosomal membrane organization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARF1 ADP ribosylation factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:228,082,708...228,099,212
Ensembl chr 1:228,082,660...228,099,212
JBrowse link
lysosome organization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 IDA (PMID:15163665) BHF-UCL PMID:15163665 NCBI chr 9:104,781,006...104,928,232
Ensembl chr 9:104,781,006...104,928,155
JBrowse link
G AC001226.2 novel protein IBA (PMID:21873635) GO_Central PMID:21873635 Ensembl chr13:76,992,078...77,129,589 JBrowse link
G ACP2 acid phosphatase 2, lysosomal IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:47,239,302...47,248,814
Ensembl chr11:47,239,302...47,248,906
JBrowse link
G ACP3 acid phosphatase 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:132,317,403...132,368,765
Ensembl chr 3:132,317,369...132,368,298
JBrowse link
G ACP4 acid phosphatase 4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr19:50,790,415...50,795,219
Ensembl chr19:50,790,415...50,795,219
JBrowse link
G AKTIP AKT interacting protein IMP (PMID:18799622) UniProtKB PMID:18799622 NCBI chr16:53,491,040...53,504,411
Ensembl chr16:53,491,040...53,504,411
JBrowse link
G AP3B1 adaptor related protein complex 3 subunit beta 1 IEA Ensembl GO_REF:0000107 NCBI chr 5:78,000,522...78,294,704
Ensembl chr 5:78,000,525...78,294,755
Ensembl chr 5:78,000,525...78,294,755
JBrowse link
G ARSB arylsulfatase B TAS (PMID:1718978) PINC PMID:1718978 NCBI chr 5:78,777,209...78,986,087
Ensembl chr 5:78,777,209...78,986,087
JBrowse link
G BECN1 beclin 1 ISO (MGI:MGI:3801567|PMID:18497889) MGI PMID:18497889 MGI:MGI:3801567 NCBI chr17:42,810,132...42,824,282
Ensembl chr17:42,810,134...42,833,350
JBrowse link
G CHMP5 charged multivesicular body protein 5 IEA Ensembl GO_REF:0000107 NCBI chr 9:33,265,049...33,282,070
Ensembl chr 9:33,264,879...33,282,070
JBrowse link
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISS
IBA
(PMID:21873635) UniProtKB
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr16:28,466,653...28,492,082
Ensembl chr16:28,456,371...28,492,098
Ensembl chr16:28,456,371...28,492,098
JBrowse link
G CLN5 CLN5 intracellular trafficking protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:76,992,081...77,005,117
Ensembl chr13:76,990,660...77,019,143
JBrowse link
G CLN6 CLN6 transmembrane ER protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:68,206,992...68,229,728
Ensembl chr15:68,206,992...68,257,211
JBrowse link
G CLN8 CLN8 transmembrane ER and ERGIC protein IEA Ensembl GO_REF:0000107 NCBI chr 8:1,755,778...1,786,570
Ensembl chr 8:1,755,778...1,801,711
JBrowse link
G CLVS1 clavesin 1 IEA
IBA
ISS
(PMID:21873635) InterPro
GO_Central
UniProtKB
PMID:21873635 GO_REF:0000002, GO_REF:0000024 NCBI chr 8:60,964,833...61,501,629
Ensembl chr 8:61,057,158...61,501,645
JBrowse link
G CLVS2 clavesin 2 ISS
IBA
(PMID:21873635) UniProtKB
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr 6:122,996,235...123,072,925
Ensembl chr 6:122,996,235...123,072,925
JBrowse link
G FAM160A2 family with sequence similarity 160 member A2 IMP (PMID:18799622) UniProtKB PMID:18799622 NCBI chr11:6,211,338...6,234,663
Ensembl chr11:6,211,335...6,234,711
Ensembl chr11:6,211,335...6,234,711
JBrowse link
G GAA glucosidase alpha, acid IMP (PMID:7717400) BHF-UCL PMID:7717400 NCBI chr17:80,101,535...80,119,881
Ensembl chr17:80,101,556...80,119,881
JBrowse link
G GBA glucosylceramidase beta IMP (PMID:27378698) UniProt PMID:27378698 NCBI chr 1:155,234,452...155,244,627
Ensembl chr 1:155,234,452...155,244,699
JBrowse link
G GNPTAB N-acetylglucosamine-1-phosphate transferase subunits alpha and beta IMP (PMID:21719679) UniProtKB PMID:21719679 NCBI chr12:101,745,499...101,830,959
Ensembl chr12:101,745,499...101,830,959
JBrowse link
G GRN granulin precursor ISS UniProt GO_REF:0000024 NCBI chr17:44,345,302...44,353,106
Ensembl chr17:44,345,246...44,353,106
JBrowse link
G HEXA hexosaminidase subunit alpha ISO (MGI:MGI:83770|PMID:8896570), (MGI:MGI:894634|PMID:9184660)
(MGI:MGI:77946|PMID:8747922)
(MGI:MGI:1097747|PMID:9302266), (MGI:MGI:1271008|PMID:9645704), (MGI:MGI:1352198|PMID:10591619), (MGI:MGI:3033296|PMID:14972652)
(MGI:MGI:69059|PMID:7937929), (MGI:MGI:86923|PMID:9103204)
MGI PMID:7937929, PMID:8747922, PMID:8896570, PMID:9103204, PMID:9184660, PMID:9302266, PMID:9645704, PMID:10591619, PMID:14972652 MGI:MGI:1097747, MGI:MGI:1271008, MGI:MGI:1352198, MGI:MGI:3033296, MGI:MGI:69059, MGI:MGI:77946, MGI:MGI:83770, MGI:MGI:86923, MGI:MGI:894634 NCBI chr15:72,340,924...72,376,014
Ensembl chr15:72,340,919...72,376,476
Ensembl chr15:72,340,919...72,376,476
JBrowse link
G HEXB hexosaminidase subunit beta IEA Ensembl GO_REF:0000107 NCBI chr 5:74,640,023...74,721,288
Ensembl chr 5:74,640,023...74,722,647
JBrowse link
G HOOK1 hook microtubule tethering protein 1 IMP (PMID:18799622) UniProtKB PMID:18799622 NCBI chr 1:59,814,922...59,876,370
Ensembl chr 1:59,814,786...59,876,322
Ensembl chr 1:59,814,786...59,876,322
JBrowse link
G HOOK2 hook microtubule tethering protein 2 IMP (PMID:18799622) UniProtKB PMID:18799622 NCBI chr19:12,763,003...12,775,552
Ensembl chr19:12,763,003...12,872,740
JBrowse link
G HOOK3 hook microtubule tethering protein 3 IMP (PMID:18799622) UniProtKB PMID:18799622 NCBI chr 8:42,896,978...43,030,535
Ensembl chr 8:42,896,946...43,030,535
JBrowse link
G HPS1 HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 TAS (PMID:10625677) PINC PMID:10625677 NCBI chr10:98,416,193...98,446,963
Ensembl chr10:98,416,198...98,446,947
JBrowse link
G HPS4 HPS4 biogenesis of lysosomal organelles complex 3 subunit 2 IDA (PMID:12663659) UniProtKB PMID:12663659 NCBI chr22:26,443,109...26,483,863
Ensembl chr22:26,443,423...26,483,837
JBrowse link
G IDUA alpha-L-iduronidase ISO (MGI:MGI:4414887|PMID:19751987)
(MGI:MGI:86916|PMID:9097952)
MGI PMID:9097952, PMID:19751987 MGI:MGI:4414887, MGI:MGI:86916 NCBI chr 4:986,997...1,004,564
Ensembl chr 4:986,997...1,004,564
JBrowse link
G LAMTOR1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 IEA
ISS
InterPro
UniProtKB
GO_REF:0000002, GO_REF:0000024 NCBI chr11:72,097,292...72,103,297
Ensembl chr11:72,085,895...72,103,297
JBrowse link
G LRRK2 leucine rich repeat kinase 2 IMP (PMID:25416817) ParkinsonsUK-UCL PMID:25416817 NCBI chr12:40,224,890...40,369,285
Ensembl chr12:40,196,744...40,369,285
JBrowse link
G LYST lysosomal trafficking regulator IEA InterPro GO_REF:0000002 NCBI chr 1:235,661,031...235,883,713
Ensembl chr 1:235,661,041...235,883,640
JBrowse link
G MBTPS1 membrane bound transcription factor peptidase, site 1 IMP (PMID:21719679) UniProtKB PMID:21719679 NCBI chr16:84,053,763...84,116,942
Ensembl chr16:84,053,761...84,116,942
JBrowse link
G MFSD8 major facilitator superfamily domain containing 8 IEA Ensembl GO_REF:0000107 NCBI chr 4:127,917,732...127,965,988
Ensembl chr 4:127,917,732...127,966,034
Ensembl chr 4:127,917,732...127,966,034
JBrowse link
G MTOR mechanistic target of rapamycin kinase IDA (PMID:22692423) UniProt PMID:22692423 NCBI chr 1:11,106,535...11,273,497
Ensembl chr 1:11,106,535...11,262,551
JBrowse link
G MYO7A myosin VIIA IDA (PMID:16001398) UniProtKB PMID:16001398 NCBI chr11:77,128,192...77,215,241
Ensembl chr11:77,128,246...77,215,241
JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase IEA Ensembl GO_REF:0000107 NCBI chr17:42,534,238...42,544,449
Ensembl chr17:42,536,241...42,544,449
JBrowse link
G NAGPA N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase TAS (PMID:10551838) PINC PMID:10551838 NCBI chr16:5,024,844...5,033,940
Ensembl chr16:5,024,844...5,034,141
JBrowse link
G PPT1 palmitoyl-protein thioesterase 1 ISO (MGI:MGI:3612221|PMID:16368712)
(MGI:MGI:3654230|PMID:16542649)
MGI PMID:16368712, PMID:16542649 MGI:MGI:3612221, MGI:MGI:3654230 NCBI chr 1:40,071,461...40,097,252
Ensembl chr 1:40,072,710...40,097,260
Ensembl chr 1:40,072,710...40,097,260
JBrowse link
G SNAPIN SNAP associated protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:153,658,654...153,661,852
Ensembl chr 1:153,658,703...153,661,852
JBrowse link
G SPG11 SPG11 vesicle trafficking associated, spatacsin ISO (MGI:MGI:5749311|PMID:26284655) MGI PMID:26284655 MGI:MGI:5749311 NCBI chr15:44,562,696...44,663,678
Ensembl chr15:44,562,696...44,663,678
JBrowse link
G TFEB transcription factor EB IMP
IDA
(PMID:23434374)
(PMID:22692423)
UniProtKB
UniProt
PMID:22692423, PMID:23434374 NCBI chr 6:41,683,978...41,736,223
Ensembl chr 6:41,683,978...41,736,259
JBrowse link
G TMEM106B transmembrane protein 106B IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:12,211,294...12,243,367
Ensembl chr 7:12,211,270...12,243,367
JBrowse link
G TPCN2 two pore segment channel 2 IGI (PMID:25416817) ParkinsonsUK-UCL PMID:25416817 NCBI chr11:69,048,932...69,090,597
Ensembl chr11:69,048,932...69,136,316
JBrowse link
G TPP1 tripeptidyl peptidase 1 ISS UniProtKB GO_REF:0000024 NCBI chr11:6,612,768...6,619,422
Ensembl chr11:6,612,768...6,619,448
JBrowse link
G VPS18 VPS18 core subunit of CORVET and HOPS complexes IDA
IBA
(PMID:18799622)
(PMID:21873635)
UniProtKB
GO_Central
PMID:18799622, PMID:21873635 NCBI chr15:40,894,410...40,903,975
Ensembl chr15:40,894,450...40,903,975
JBrowse link
G VPS35 VPS35 retromer complex component IEA Ensembl GO_REF:0000107 NCBI chr16:46,656,132...46,689,194
Ensembl chr16:46,656,132...46,689,518
JBrowse link
G WASHC5 WASH complex subunit 5 IEA Ensembl GO_REF:0000107 NCBI chr 8:125,024,260...125,091,796
Ensembl chr 8:125,024,260...125,091,819
JBrowse link
G ZKSCAN3 zinc finger with KRAB and SCAN domains 3 IMP (PMID:23434374) UniProtKB PMID:23434374 NCBI chr 6:28,349,913...28,369,174
Ensembl chr 6:28,349,947...28,369,172
JBrowse link
negative regulation of lysosome organization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BECN1 beclin 1 ISO RGD PMID:25561470 RGD:11561937 NCBI chr17:42,810,132...42,824,282
Ensembl chr17:42,810,134...42,833,350
JBrowse link
phagolysosome assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CORO1A coronin 1A IEA
IMP
(PMID:12132654) InterPro
UniProtKB
PMID:12132654 GO_REF:0000002 NCBI chr16:30,183,602...30,189,076
Ensembl chr16:30,182,827...30,189,076
JBrowse link
G MYO7A myosin VIIA IEA Ensembl GO_REF:0000107 NCBI chr11:77,128,192...77,215,241
Ensembl chr11:77,128,246...77,215,241
JBrowse link
G P2RX7 purinergic receptor P2X 7 IEA Ensembl GO_REF:0000107 NCBI chr12:121,132,819...121,188,032
Ensembl chr12:121,132,819...121,188,032
JBrowse link
G SRPX sushi repeat containing protein X-linked IEA Ensembl GO_REF:0000107 NCBI chr  X:38,149,339...38,220,881
Ensembl chr  X:38,149,336...38,220,924
JBrowse link
phagolysosome assembly involved in apoptotic cell clearance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAB14 RAB14, member RAS oncogene family IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:121,178,133...121,201,869
Ensembl chr 9:121,178,133...121,223,014
JBrowse link
phagosome-lysosome docking term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISS UniProt GO_REF:0000024 NCBI chr16:28,466,653...28,492,082
Ensembl chr16:28,456,371...28,492,098
Ensembl chr16:28,456,371...28,492,098
JBrowse link
phagosome-lysosome fusion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISS UniProt GO_REF:0000024 NCBI chr16:28,466,653...28,492,082
Ensembl chr16:28,456,371...28,492,098
Ensembl chr16:28,456,371...28,492,098
JBrowse link
G PIKFYVE phosphoinositide kinase, FYVE-type zinc finger containing IDA (PMID:28779020) UniProt PMID:28779020 NCBI chr 2:208,266,178...208,358,747
Ensembl chr 2:208,266,255...208,358,746
JBrowse link
G PLA2G5 phospholipase A2 group V ISS UniProt GO_REF:0000024 NCBI chr 1:20,028,349...20,091,911
Ensembl chr 1:20,028,179...20,091,911
JBrowse link
G RAB20 RAB20, member RAS oncogene family IMP (PMID:21255211) UniProtKB PMID:21255211 NCBI chr13:110,523,066...110,561,722
Ensembl chr13:110,523,066...110,561,722
JBrowse link
G RAB34 RAB34, member RAS oncogene family IMP
IBA
(PMID:21255211)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21255211, PMID:21873635 NCBI chr17:28,714,281...28,718,440
Ensembl chr17:28,714,281...28,718,429
JBrowse link
G RAB39A RAB39A, member RAS oncogene family IMP (PMID:21255211) UniProtKB PMID:21255211 NCBI chr11:107,928,448...107,963,482
Ensembl chr11:107,928,448...107,963,482
JBrowse link
G RAB7A RAB7A, member RAS oncogene family IMP
IBA
(PMID:21255211)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21255211, PMID:21873635 NCBI chr 3:128,726,183...128,814,798
Ensembl chr 3:128,693,669...128,825,942
Ensembl chr 3:128,693,669...128,825,942
Ensembl chr 3:128,693,669...128,825,942
JBrowse link
G RAB7B RAB7B, member RAS oncogene family IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:205,976,740...206,003,470
Ensembl chr 1:205,976,740...206,003,461
JBrowse link
G SYT7 synaptotagmin 7 ISS UniProtKB GO_REF:0000024 NCBI chr11:61,513,714...61,588,404
Ensembl chr11:61,513,714...61,581,148
Ensembl chr11:61,513,714...61,581,148
JBrowse link
G TMEM175 transmembrane protein 175 IEA Ensembl GO_REF:0000107 NCBI chr 4:932,412...958,656
Ensembl chr 4:932,387...958,656
JBrowse link
phagosome-lysosome fusion involved in apoptotic cell clearance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPG11 SPG11 vesicle trafficking associated, spatacsin IEA Ensembl GO_REF:0000107 NCBI chr15:44,562,696...44,663,678
Ensembl chr15:44,562,696...44,663,678
JBrowse link
positive regulation of lysosomal membrane permeability term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSPA8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:9038169 RGD:10059368 NCBI chr11:123,057,489...123,062,366
Ensembl chr11:123,057,489...123,063,230
JBrowse link
G MT3 metallothionein 3 ISS UniProtKB GO_REF:0000024 NCBI chr16:56,589,528...56,591,085
Ensembl chr16:56,589,074...56,591,088
JBrowse link
positive regulation of lysosome organization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GRN granulin precursor IDA (PMID:28073925) UniProt PMID:28073925 NCBI chr17:44,345,302...44,353,106
Ensembl chr17:44,345,246...44,353,106
JBrowse link
regulation of lysosomal lumen pH term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRRK2 leucine rich repeat kinase 2 IMP (PMID:22012985) ParkinsonsUK-UCL PMID:22012985 NCBI chr12:40,224,890...40,369,285
Ensembl chr12:40,196,744...40,369,285
JBrowse link
G TASL TLR adaptor interacting with endolysosomal SLC15A4 IDA
IBA
(PMID:31001245)
(PMID:21873635)
UniProt
GO_Central
PMID:21873635, PMID:31001245 NCBI chr  X:30,558,809...30,577,766
Ensembl chr  X:30,558,809...30,577,766
JBrowse link
G TMEM165 transmembrane protein 165 IMP (PMID:23569283) UniProtKB PMID:23569283 NCBI chr 4:55,395,653...55,453,397
Ensembl chr 4:55,395,957...55,453,397
JBrowse link
G TMEM175 transmembrane protein 175 IEA Ensembl GO_REF:0000107 NCBI chr 4:932,412...958,656
Ensembl chr 4:932,387...958,656
JBrowse link
G VPS33A VPS33A core subunit of CORVET and HOPS complexes IMP (PMID:28013294) UniProtKB PMID:28013294 NCBI chr12:122,229,564...122,266,494
Ensembl chr12:122,229,564...122,266,494
JBrowse link
regulation of lysosomal membrane permeability term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAPTM4B lysosomal protein transmembrane 4 beta IMP (PMID:26280656) UniProtKB PMID:26280656 NCBI chr 8:97,775,788...97,853,013
Ensembl chr 8:97,775,057...97,853,013
JBrowse link
regulation of lysosome organization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAPTM4B lysosomal protein transmembrane 4 beta IMP (PMID:26280656) UniProtKB PMID:26280656 NCBI chr 8:97,775,788...97,853,013
Ensembl chr 8:97,775,057...97,853,013
JBrowse link
G SCARB2 scavenger receptor class B member 2 TAS (PMID:12356916) ParkinsonsUK-UCL PMID:12356916 NCBI chr 4:76,158,737...76,213,824
Ensembl chr 4:76,158,737...76,234,536
JBrowse link
G TREX1 three prime repair exonuclease 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:48,465,830...48,467,645
Ensembl chr 3:48,465,811...48,467,645
JBrowse link

Term paths to the root
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  biological_process 18626
    cellular process 17648
      cellular component organization or biogenesis 7120
        cellular component organization 6929
          organelle organization 4320
            vacuole organization 188
              lytic vacuole organization 75
                lysosome organization + 75
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.