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ONTOLOGY REPORT - ANNOTATIONS


Term:SA node cell action potential
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Accession:GO:0086015 term browser browse the term
Definition:An action potential that occurs in a sinoatrial node cardiac muscle cell.
Synonyms:exact_synonym: SA node cardiac muscle cell action potential;   SAN cardiac muscle cell action potential;   sinoatrial node cardiac muscle cell action potential
 narrow_synonym: sinus node cardiac muscle cell action potential


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SA node cell action potential term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 ISO (MGI:MGI:5430886|PMID:18832177) RGD PMID:18832177 MGI:MGI:5430886 NCBI chr 2:231,224,643...231,522,655
Ensembl chr 2:231,226,949...231,648,122
JBrowse link
G Cacna1g calcium voltage-gated channel subunit alpha1 G ISO
ISS
(MGI:MGI:3714901|PMID:16690884)
GO_REF:0000024
RGD
BHF-UCL
PMID:16690884 GO_REF:0000024, MGI:MGI:3714901 NCBI chr10:82,129,071...82,197,828
Ensembl chr10:82,129,506...82,197,848
JBrowse link
G Gja5 gap junction protein, alpha 5 ISO MGI:MGI:2445466 (MGI:MGI:3664488|PMID:11046183) RGD PMID:11046183 MGI:MGI:3664488 NCBI chr 2:199,162,745...199,184,942
Ensembl chr 2:199,162,745...199,184,939
JBrowse link
G Hcn4 hyperpolarization activated cyclic nucleotide-gated potassium channel 4 ISO (PMID:12750403) RGD PMID:12750403 NCBI chr 8:63,599,907...63,637,327
Ensembl chr 8:63,600,663...63,639,654
JBrowse link
G Scn3b sodium voltage-gated channel beta subunit 3 ISO (MGI:MGI:5294533|PMID:19796257) RGD PMID:19796257 MGI:MGI:5294533 NCBI chr 8:44,136,413...44,159,011
Ensembl chr 8:44,136,496...44,159,010
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 ISO
ISS
(PMID:18616619)
GO_REF:0000024
RGD
BHF-UCL
PMID:18616619 GO_REF:0000024 NCBI chr 8:128,169,191...128,266,681
Ensembl chr 8:128,169,191...128,266,639
JBrowse link
membrane depolarization during SA node cell action potential term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1d calcium voltage-gated channel subunit alpha1 D ISO
IEA
MGI:MGI:2180141 (MGI:MGI:3583874|PMID:12700358)
GO_REF:0000107
(PMID:21131953)
RGD
Ensembl
PMID:12700358, PMID:21131953 GO_REF:0000107, MGI:MGI:3583874 NCBI chr16:6,110,294...6,405,022
Ensembl chr16:6,112,150...6,405,117
JBrowse link
G Cacna1g calcium voltage-gated channel subunit alpha1 G ISO
ISS
IEA
(MGI:MGI:3714901|PMID:16690884)
GO_REF:0000024
GO_REF:0000107
RGD
BHF-UCL
Ensembl
PMID:16690884 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3714901 NCBI chr10:82,129,071...82,197,828
Ensembl chr10:82,129,506...82,197,848
JBrowse link
G Hcn4 hyperpolarization activated cyclic nucleotide-gated potassium channel 4 IEA
ISO
GO_REF:0000107
(PMID:16407510)
Ensembl
RGD
PMID:16407510 GO_REF:0000107 NCBI chr 8:63,599,907...63,637,327
Ensembl chr 8:63,600,663...63,639,654
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 ISO
IEA
ISS
(PMID:18616619)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
BHF-UCL
PMID:18616619 GO_REF:0000024, GO_REF:0000107 NCBI chr 8:128,169,191...128,266,681
Ensembl chr 8:128,169,191...128,266,639
JBrowse link
membrane repolarization during SA node cell action potential term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcna5 potassium voltage-gated channel subfamily A member 5 ISO (PMID:19343045) RGD PMID:19343045 NCBI chr 4:159,077,195...159,079,003
Ensembl chr 4:159,077,195...159,079,003
JBrowse link
regulation of SA node cell action potential term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 ISO (MGI:MGI:2449848|PMID:12571597)
(PMID:12571597), (PMID:18832177)
RGD PMID:12571597, PMID:18832177 MGI:MGI:2449848 NCBI chr 2:231,224,643...231,522,655
Ensembl chr 2:231,226,949...231,648,122
JBrowse link
G Ryr2 ryanodine receptor 2 ISO
IEA
(PMID:17875969)
GO_REF:0000107
RGD
Ensembl
PMID:17875969 GO_REF:0000107 NCBI chr17:65,533,998...65,955,606
Ensembl chr17:65,535,403...65,955,606
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    signaling 7588
      cell-cell signaling 1752
        cell-cell signaling involved in cardiac conduction 25
          SA node cell to atrial cardiac muscle cell signaling 9
            SA node cell action potential 9
              membrane depolarization during SA node cell action potential 4
              membrane repolarization during SA node cell action potential 1
              regulation of SA node cell action potential 2
Path 2
Term Annotations click to browse term
  biological_process 20014
    multicellular organismal process 9055
      system process 3445
        circulatory system process 578
          blood circulation 550
            heart contraction 246
              regulation of heart contraction 200
                cardiac conduction 66
                  cell communication involved in cardiac conduction 41
                    SA node cell to atrial cardiac muscle cell communication 9
                      SA node cell to atrial cardiac muscle cell signaling 9
                        SA node cell action potential 9
                          membrane depolarization during SA node cell action potential 4
                          membrane repolarization during SA node cell action potential 1
                          regulation of SA node cell action potential 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.