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ONTOLOGY REPORT - ANNOTATIONS


Term:COPII-coated vesicle cargo loading
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Accession:GO:0090110 term browser browse the term
Definition:The formation of a macromolecular complex between the COPII coat proteins and proteins and/or lipoproteins that are going to be transported by the COPII vesicle to the Golgi.
Synonyms:exact_synonym: cargo loading into COPII vesicle;   cargo loading into COPII-coated vesicle;   cargo selection into COPII-coated vesicle
 related_synonym: COPII coat-cargo complex assembly


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COPII-coated vesicle cargo loading term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mia3 MIA SH3 domain ER export factor 3 ISO (PMID:27138255) RGD PMID:27138255 NCBI chr13:101,727,434...101,770,127
Ensembl chr13:101,727,935...101,761,541
JBrowse link
G Rab1a RAB1A, member RAS oncogene family ISO (PMID:17684057) RGD PMID:17684057 NCBI chr14:104,475,082...104,500,176
Ensembl chr14:104,475,082...104,501,020
JBrowse link
G Sar1a secretion associated, Ras related GTPase 1A ISO (PMID:17499046), (PMID:18843296) RGD PMID:17499046, PMID:18843296 NCBI chr20:31,298,269...31,310,676
Ensembl chr20:31,265,483...31,310,674
JBrowse link
G Scap SREBF chaperone ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 8:118,551,869...118,628,650
Ensembl chr 8:118,570,503...118,628,651
JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component ISO (PMID:17499046), (PMID:18843296) RGD PMID:17499046, PMID:18843296 NCBI chr 4:145,686,186...145,699,577
Ensembl chr 4:145,686,193...145,699,577
JBrowse link
G Sec23a Sec23 homolog A, COPII coat complex component ISO
IBA
UniProtKB:P15303 (PMID:17499046), (PMID:18843296), (PMID:8898360)
PMID:21873635
RGD PMID:8898360, PMID:17499046, PMID:18843296, PMID:21873635 RGD:13792537 NCBI chr 6:80,059,742...80,107,340
Ensembl chr 6:80,060,916...80,107,236
JBrowse link
G Sec23b Sec23 homolog B, COPII coat complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:138,715,118...138,757,111
Ensembl chr 3:138,715,570...138,757,111
JBrowse link
G Sec24a SEC24 homolog A, COPII coat complex component ISO
IBA
(PMID:17499046), (PMID:18843296)
PMID:21873635
RGD PMID:17499046, PMID:18843296, PMID:21873635 RGD:13792537 NCBI chr10:37,138,539...37,215,899
Ensembl chr10:37,139,806...37,215,899
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component ISO
IBA
(PMID:17499046), (PMID:18843296)
PMID:21873635
RGD PMID:17499046, PMID:18843296, PMID:21873635 RGD:13792537 NCBI chr 2:230,286,886...230,356,887
Ensembl chr 2:230,287,296...230,356,919
JBrowse link
G Sec24c SEC24 homolog C, COPII coat complex component ISO
IBA
(PMID:17499046), (PMID:18843296)
PMID:21873635
RGD PMID:17499046, PMID:18843296, PMID:21873635 RGD:13792537 NCBI chr15:4,035,196...4,057,209
Ensembl chr15:4,035,196...4,057,157
JBrowse link
G Sec24d SEC24 homolog D, COPII coat complex component ISO
IBA
(PMID:17499046), (PMID:18843296)
PMID:21873635
RGD PMID:17499046, PMID:18843296, PMID:21873635 RGD:13792537 NCBI chr 2:227,455,704...227,562,801
Ensembl chr 2:227,455,722...227,562,319
JBrowse link
G Sec31a SEC31 homolog A, COPII coat complex component IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:17499046), (PMID:18843296)
Ensembl
RGD
PMID:17499046, PMID:18843296, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr14:10,854,713...10,909,579
Ensembl chr14:10,854,682...10,909,612
JBrowse link
G Sec31b SEC31 homolog B, COPII coat complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:264,266,279...264,294,687
Ensembl chr 1:264,268,338...264,294,630
JBrowse link
G Tbc1d20 TBC1 domain family, member 20 ISO (PMID:17684057) RGD PMID:17684057 NCBI chr 3:147,772,006...147,790,946
Ensembl chr 3:147,772,165...147,789,158
JBrowse link
negative regulation of cargo loading into COPII-coated vesicle term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Insig1 insulin induced gene 1 ISO (PMID:15899885) RGD PMID:15899885 NCBI chr 4:342,302...350,515
Ensembl chr 4:342,302...350,515
JBrowse link
G Sar1a secretion associated, Ras related GTPase 1A ISO (MGI:MGI:5496780|PMID:23580231) RGD PMID:23580231 MGI:MGI:5496780 NCBI chr20:31,298,269...31,310,676
Ensembl chr20:31,265,483...31,310,674
JBrowse link
regulation of cargo loading into COPII-coated vesicle term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sar1a secretion associated, Ras related GTPase 1A ISO (MGI:MGI:4438817|PMID:19966784) RGD PMID:19966784 MGI:MGI:4438817 NCBI chr20:31,298,269...31,310,676
Ensembl chr20:31,265,483...31,310,674
JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component ISO MGI:MGI:4440619|MGI:MGI:4440621 (MGI:MGI:4438817|PMID:19966784) RGD PMID:19966784 MGI:MGI:4438817 NCBI chr 2:230,286,886...230,356,887
Ensembl chr 2:230,287,296...230,356,919
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    localization 6478
      cellular localization 2967
        localization within membrane 112
          COPII-coated vesicle cargo loading 15
            negative regulation of cargo loading into COPII-coated vesicle 2
            regulation of cargo loading into COPII-coated vesicle + 3
Path 2
Term Annotations click to browse term
  biological_process 20028
    cellular process 18800
      cellular component organization or biogenesis 6789
        cellular component organization 6534
          organelle organization 4101
            vesicle organization 295
              vesicle budding from membrane 70
                Golgi vesicle budding 37
                  COPII-coated vesicle budding 28
                    COPII-coated vesicle cargo loading 15
                      negative regulation of cargo loading into COPII-coated vesicle 2
                      regulation of cargo loading into COPII-coated vesicle + 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.