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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of branching involved in ureteric bud morphogenesis
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Accession:GO:0090189 term browser browse the term
Definition:Any process that modulates the rate, frequency or extent of branching involved in ureteric bud morphogenesis, the process in which the branching structure of the ureteric bud is generated and organized. The ureteric bud is an epithelial tube that grows out from the metanephric duct. The bud elongates and branches to give rise to the ureter and kidney collecting tubules.


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regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Six2 SIX homeobox 2 ISO (MGI:3691408|PMID:17036046) RGD PMID:17036046 MGI:3691408 NCBI chr 6:8,952,572...8,955,893
Ensembl chr 6:8,952,572...8,956,276
JBrowse link
negative regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISS
ISO
GO_REF:0000024
MGI:102780 (MGI:3525902|PMID:15634693), (MGI:4949995|PMID:21281623)
(PMID:12141440), (PMID:17118062)
UniProt
RGD
PMID:12141440, PMID:15634693, PMID:17118062, PMID:21281623 GO_REF:0000024, MGI:3525902, MGI:4949995 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Tacstd2 tumor-associated calcium signal transducer 2 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:5315060|PMID:22194864)
Ensembl
UniProt
RGD
PMID:22194864 GO_REF:0000024, GO_REF:0000107, MGI:5315060 NCBI chr 4:98,341,187...98,342,887
Ensembl chr 4:98,341,188...98,342,887
JBrowse link
positive regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen ISO (PMID:18607644) RGD PMID:18607644 NCBI chr19:57,321,594...57,333,460
Ensembl chr19:57,321,640...57,333,433
JBrowse link
G Agtr1a angiotensin II receptor, type 1a IMP PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr17:35,907,102...35,958,136
Ensembl chr17:35,907,108...35,958,077
JBrowse link
G Agtr1b angiotensin II receptor, type 1b IMP PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr 2:105,149,020...105,224,335
Ensembl chr 2:105,149,020...105,224,295
JBrowse link
G Agtr2 angiotensin II receptor, type 2 IMP
ISO
PMID:17537984
(MGI:3808848|PMID:18607644)
RGD PMID:18607644, PMID:17537984 MGI:3808848, RGD:1643596 NCBI chr  X:119,389,480...119,393,845
Ensembl chr  X:119,390,013...119,393,842
JBrowse link
G Bmp4 bone morphogenetic protein 4 IMP PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Gdnf glial cell derived neurotrophic factor IMP
ISO
IBA
IEA
IDA
PMID:17537984
(MGI:5284782|PMID:17229286)
PMID:21873635
(PMID:17229286), (PMID:8657307)
GO_REF:0000107
PMID:17522159
RGD
Ensembl
PMID:8657307, PMID:17229286, PMID:17537984, PMID:21873635, PMID:17522159 GO_REF:0000107, MGI:5284782, RGD:1643596, RGD:13792537, RGD:8656002 NCBI chr 2:56,884,181...56,912,964
Ensembl chr 2:56,887,987...56,910,238
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist ISO MGI:88180 (MGI:3714585|PMID:17522159), (MGI:4949995|PMID:21281623) RGD PMID:17522159, PMID:21281623 MGI:3714585, MGI:4949995 NCBI chr 3:105,203,309...105,214,989
Ensembl chr 3:105,203,309...105,214,989
JBrowse link
G Hoxb7 homeo box B7 ISO (MGI:3833510|PMID:17881463) RGD PMID:17881463 MGI:3833510 NCBI chr10:84,135,224...84,138,642
Ensembl chr10:84,135,116...84,138,637
JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 ISO (MGI:5006869|PMID:21523854) RGD PMID:21523854 MGI:5006869 NCBI chr 3:101,051,960...101,152,119
Ensembl chr 3:101,051,955...101,152,119
JBrowse link
G Lhx1 LIM homeobox 1 ISS
ISO
GO_REF:0000024
(MGI:3613206|PMID:16216236)
UniProt
RGD
PMID:16216236 GO_REF:0000024, MGI:3613206 NCBI chr10:71,843,991...71,849,293
Ensembl chr10:71,843,991...71,849,293
JBrowse link
G Maged1 MAGE family member D1 ISO (MGI:3848096|PMID:19268530) RGD PMID:19268530 MGI:3848096 NCBI chr  X:63,803,194...63,809,715
Ensembl chr  X:63,803,189...63,809,861
JBrowse link
G Nog noggin IEA
ISO
ISS
GO_REF:0000107
(MGI:2446986|PMID:12141440), (MGI:3714585|PMID:17522159)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12141440, PMID:17522159 GO_REF:0000024, GO_REF:0000107, MGI:2446986, MGI:3714585 NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
JBrowse link
G Pax2 paired box 2 ISS
ISO
GO_REF:0000024
(MGI:3704067|PMID:17314325), (MGI:3833510|PMID:17881463), (MGI:5009394|PMID:17538188)
UniProt
RGD
PMID:17314325, PMID:17538188, PMID:17881463 GO_REF:0000024, MGI:3704067, MGI:3833510, MGI:5009394 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Pax8 paired box 8 ISS
ISO
GO_REF:0000024
(MGI:3704067|PMID:17314325)
UniProt
RGD
PMID:17314325 GO_REF:0000024, MGI:3704067 NCBI chr 3:1,527,316...1,586,019
Ensembl chr 3:1,527,279...1,584,946
JBrowse link
G Sall1 spalt-like transcription factor 1 ISO MGI:3603818 (MGI:5563280|PMID:24550112) RGD PMID:24550112 MGI:5563280 NCBI chr19:23,387,737...23,405,025
Ensembl chr19:23,389,375...23,405,039
JBrowse link
G Six1 SIX homeobox 1 ISO MGI:88180 (MGI:4949995|PMID:21281623), (MGI:5009396|PMID:17300925) RGD PMID:17300925, PMID:21281623 MGI:4949995, MGI:5009396 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Six4 SIX homeobox 4 ISO (MGI:5009396|PMID:17300925) RGD PMID:17300925 MGI:5009396 NCBI chr 6:95,984,868...95,999,709
Ensembl chr 6:95,984,868...95,998,529
JBrowse link
G Smo smoothened, frizzled class receptor IEA
ISO
ISS
GO_REF:0000107
(MGI:3611729|PMID:16396903)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:16396903 GO_REF:0000024, GO_REF:0000107, MGI:3611729 NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770
JBrowse link
G Sox8 SRY-box transcription factor 8 ISS
ISO
GO_REF:0000024
(MGI:4939090|PMID:21212101)
UniProt
RGD
PMID:21212101 GO_REF:0000024, MGI:4939090 NCBI chr10:14,932,348...14,937,336
Ensembl chr10:14,932,348...14,937,336
JBrowse link
G Sox9 SRY-box transcription factor 9 ISS
ISO
GO_REF:0000024
(MGI:4939090|PMID:21212101)
UniProt
RGD
PMID:21212101 GO_REF:0000024, MGI:4939090 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Tgfb1 transforming growth factor, beta 1 IMP PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Vegfa vascular endothelial growth factor A ISO (MGI:3611700|PMID:16291795) RGD PMID:16291795 MGI:3611700 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
G Wnt2b Wnt family member 2B ISO (MGI:2150217|PMID:11507767) RGD PMID:11507767 MGI:2150217 NCBI chr 2:207,433,771...207,457,094
Ensembl chr 2:207,440,886...207,455,258
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    multicellular organismal process 9047
      morphogenesis of a branching structure 249
        regulation of morphogenesis of a branching structure 66
          regulation of branching involved in ureteric bud morphogenesis 25
            negative regulation of branching involved in ureteric bud morphogenesis 2
            positive regulation of branching involved in ureteric bud morphogenesis 23
Path 2
Term Annotations click to browse term
  biological_process 20020
    developmental process 6826
      anatomical structure development 6268
        multicellular organism development 5743
          system development 5279
            urogenital system development 432
              renal system development 382
                kidney development 368
                  nephron development 166
                    nephron epithelium development 124
                      nephron tubule development 105
                        nephron tubule morphogenesis 85
                          mesonephric tubule morphogenesis 76
                            ureteric bud morphogenesis 75
                              branching involved in ureteric bud morphogenesis 67
                                regulation of branching involved in ureteric bud morphogenesis 25
                                  negative regulation of branching involved in ureteric bud morphogenesis 2
                                  positive regulation of branching involved in ureteric bud morphogenesis 23
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.