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ONTOLOGY REPORT - ANNOTATIONS


Term:gene looping
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Accession:GO:0090202 term browser browse the term
Definition:The formation and maintenance of DNA loops that juxtapose sequentially separated regions of RNA polymerase II-transcribed genes.


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transcriptional activation by promoter-enhancer looping term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA1 GATA binding protein 1 IEA Ensembl GO_REF:0000107 NCBI chr  X:41,991,321...41,998,319
Ensembl chr  X:41,971,582...41,998,303
JBrowse link
G NIPBL NIPBL cohesin loading factor IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:71,583,118...71,780,986
Ensembl chr 4:71,583,732...71,780,852
JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 IEA Ensembl GO_REF:0000107 NCBI chr 1:107,384,328...107,400,849
Ensembl chr 1:107,384,342...107,400,505
JBrowse link
G ZFPM1 zinc finger protein, FOG family member 1 ISO (MGI:MGI:5284796|PMID:15644435) BHF-UCL PMID:15644435 MGI:MGI:5284796 NCBI chr 5:64,812,353...64,863,278 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16162
    cellular process 15440
      cellular component organization or biogenesis 6022
        cellular component organization 5853
          chromatin organization 714
            gene looping 4
              transcriptional activation by promoter-enhancer looping 4
              transcriptional activation by promoter-terminator looping 0
Path 2
Term Annotations click to browse term
  biological_process 16162
    cellular process 15440
      cellular component organization or biogenesis 6022
        cellular component organization 5853
          organelle organization 3699
            chromosome organization 1110
              chromatin organization 714
                gene looping 4
                  transcriptional activation by promoter-enhancer looping 4
                  transcriptional activation by promoter-terminator looping 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.