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ONTOLOGY REPORT - ANNOTATIONS


Term:gene looping
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Accession:GO:0090202 term browser browse the term
Definition:The formation and maintenance of DNA loops that juxtapose sequentially separated regions of RNA polymerase II-transcribed genes.


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transcriptional activation by promoter-enhancer looping term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata1 GATA binding protein 1 IDA (MGI:MGI:5284796|PMID:15644435) BHF-UCL PMID:15644435 MGI:MGI:5284796 NCBI chr  X:7,959,260...7,976,663
Ensembl chr  X:7,959,260...7,978,071
JBrowse link
G Nipbl NIPBL cohesin loading factor IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr15:8,289,824...8,465,315
Ensembl chr15:8,290,617...8,444,463
JBrowse link
G Ruvbl2 RuvB-like protein 2 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 7:45,421,896...45,436,171
Ensembl chr 7:45,421,760...45,438,096
JBrowse link
G Zfpm1 zinc finger protein, multitype 1 IDA (MGI:MGI:5284796|PMID:15644435) BHF-UCL PMID:15644435 MGI:MGI:5284796 NCBI chr 8:122,281,856...122,337,862
Ensembl chr 8:122,282,141...122,337,251
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23369
    cellular process 17359
      cellular component organization or biogenesis 6385
        cellular component organization 6197
          chromatin organization 791
            gene looping 4
              transcriptional activation by promoter-enhancer looping 4
              transcriptional activation by promoter-terminator looping 0
Path 2
Term Annotations click to browse term
  biological_process 23369
    cellular process 17359
      cellular component organization or biogenesis 6385
        cellular component organization 6197
          organelle organization 3829
            chromosome organization 1172
              chromatin organization 791
                gene looping 4
                  transcriptional activation by promoter-enhancer looping 4
                  transcriptional activation by promoter-terminator looping 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.