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ONTOLOGY REPORT - ANNOTATIONS


Term:gene looping
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Accession:GO:0090202 term browser browse the term
Definition:The formation and maintenance of DNA loops that juxtapose sequentially separated regions of RNA polymerase II-transcribed genes.


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transcriptional activation by promoter-enhancer looping term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA1 GATA binding protein 1 IEA Ensembl GO_REF:0000107 NCBI chr  X:42,898,431...42,905,939
Ensembl chr  X:42,898,442...42,905,976
JBrowse link
G NIPBL NIPBL cohesin loading factor IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:22,152,455...22,364,373
Ensembl chr16:22,152,501...22,363,847
JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 IEA Ensembl GO_REF:0000107 NCBI chr 6:54,250,494...54,263,492
Ensembl chr 6:54,250,515...54,266,893
JBrowse link
G ZFPM1 zinc finger protein, FOG family member 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:1,091,158...1,153,972
Ensembl chr 6:1,091,259...1,108,717
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16524
    cellular process 15756
      cellular component organization or biogenesis 5964
        cellular component organization 5795
          chromatin organization 699
            gene looping 4
              transcriptional activation by promoter-enhancer looping 4
              transcriptional activation by promoter-terminator looping 0
Path 2
Term Annotations click to browse term
  biological_process 16524
    cellular process 15756
      cellular component organization or biogenesis 5964
        cellular component organization 5795
          organelle organization 3644
            chromosome organization 1086
              chromatin organization 699
                gene looping 4
                  transcriptional activation by promoter-enhancer looping 4
                  transcriptional activation by promoter-terminator looping 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.