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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of DNA methylation-dependent heterochromatin assembly
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Accession:GO:0090309 term browser browse the term
Definition:Any process that increases the rate, frequency, or extent of the repression of transcription by methylation of DNA, leading to the formation of heterochromatin.
Synonyms:broad_synonym: positive regulation of methylation-dependent chromatin silencing


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positive regulation of DNA methylation-dependent heterochromatin assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF7IP activating transcription factor 7 interacting protein ISO (PMID:27732843) UniProt PMID:27732843 NCBI chr12:14,373,084...14,504,286
Ensembl chr12:14,789,794...14,900,411
JBrowse link
G DNMT1 DNA methyltransferase 1 ISO (PMID:24623306) UniProtKB PMID:24623306 NCBI chr19:9,681,847...9,745,334
Ensembl chr19:10,342,478...10,406,972
JBrowse link
G MORC2 MORC family CW-type zinc finger 2 ISO (PMID:28581500), (PMID:29211708)
(MGI:MGI:6271895|PMID:29728365)
UniProt PMID:28581500, PMID:29211708, PMID:29728365 MGI:MGI:6271895 NCBI chr22:11,912,043...11,995,497
Ensembl chr22:29,753,241...29,795,632
JBrowse link
G MPHOSPH8 M-phase phosphoprotein 8 ISO (PMID:28581500), (PMID:29211708) UniProt PMID:28581500, PMID:29211708 NCBI chr13:932,620...999,853
Ensembl chr13:19,278,149...19,316,389
JBrowse link
G PPHLN1 periphilin 1 ISO (PMID:28581500) UniProt PMID:28581500 NCBI chr12:46,271,425...46,392,128
Ensembl chr12:47,125,110...47,256,615
JBrowse link
G RESF1 retroelement silencing factor 1 ISO (MGI:MGI:6271895|PMID:29728365) UniProt PMID:29728365 MGI:MGI:6271895 NCBI chr12:54,238,276...54,272,288
Ensembl chr12:56,829,272...56,863,359
JBrowse link
G SETDB1 SET domain bifurcated histone lysine methyltransferase 1 ISO (PMID:24623306), (PMID:27732843)
(MGI:MGI:5440670|PMID:20164836), (MGI:MGI:6271895|PMID:29728365)
UniProt PMID:20164836, PMID:24623306, PMID:27732843, PMID:29728365 MGI:MGI:5440670, MGI:MGI:6271895 NCBI chr 1:126,275,719...126,314,043
Ensembl chr 1:129,925,009...129,962,442
JBrowse link
G TASOR transcription activation suppressor ISO (PMID:28581500), (PMID:29211708) UniProt PMID:28581500, PMID:29211708 NCBI chr 3:56,555,945...56,619,151
Ensembl chr 3:57,771,656...57,834,077
JBrowse link
G TRIM28 tripartite motif containing 28 ISO (PMID:24623306)
(MGI:MGI:5440670|PMID:20164836)
UniProtKB
UniProt
PMID:20164836, PMID:24623306 MGI:MGI:5440670 NCBI chr19:55,557,130...55,563,802
Ensembl chr19:64,371,477...64,377,144
JBrowse link
G ZNF304 zinc finger protein 304 ISO (PMID:24623306) UniProtKB PMID:24623306 NCBI chr19:54,365,820...54,374,436
Ensembl chr19:63,198,736...63,204,914
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12561
    metabolic process 7977
      positive regulation of metabolic process 3455
        positive regulation of macromolecule metabolic process 3205
          positive regulation of DNA methylation-dependent heterochromatin assembly 10
Path 2
Term Annotations click to browse term
  biological_process 12561
    metabolic process 7977
      cellular metabolic process 7333
        cellular aromatic compound metabolic process 3878
          nucleobase-containing compound metabolic process 3701
            nucleic acid metabolic process 3398
              RNA metabolic process 3010
                RNA biosynthetic process 2446
                  regulation of RNA biosynthetic process 2368
                    regulation of nucleic acid-templated transcription 2363
                      negative regulation of nucleic acid-templated transcription 1117
                        negative regulation of transcription, DNA-templated 1113
                          chromatin organization involved in negative regulation of transcription 61
                            heterochromatin assembly 43
                              regulation of heterochromatin assembly 19
                                regulation of DNA methylation-dependent heterochromatin assembly 14
                                  positive regulation of DNA methylation-dependent heterochromatin assembly 10
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.