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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of DNA methylation-dependent heterochromatin assembly
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Accession:GO:0090309 term browser browse the term
Definition:Any process that increases the rate, frequency, or extent of the repression of transcription by methylation of DNA, leading to the formation of heterochromatin.
Synonyms:broad_synonym: positive regulation of methylation-dependent chromatin silencing


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positive regulation of DNA methylation-dependent heterochromatin assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf7ip activating transcription factor 7 interacting protein ISO (PMID:27732843) UniProt PMID:27732843 NCBI chrNW_004955413:11,117,369...11,261,787
Ensembl chrNW_004955413:11,117,223...11,261,606
JBrowse link
G Dnmt1 DNA methyltransferase 1 ISO (PMID:24623306) UniProtKB PMID:24623306 NCBI chrNW_004955495:1,465,529...1,505,379
Ensembl chrNW_004955495:1,465,480...1,505,462
JBrowse link
G Morc2 MORC family CW-type zinc finger 2 ISO (MGI:MGI:6271895|PMID:29728365)
(PMID:28581500), (PMID:29211708)
UniProt PMID:28581500, PMID:29211708, PMID:29728365 MGI:MGI:6271895 NCBI chrNW_004955455:5,124,737...5,164,495
Ensembl chrNW_004955455:5,124,737...5,164,495
JBrowse link
G Mphosph8 M-phase phosphoprotein 8 ISO (PMID:28581500), (PMID:29211708) UniProt PMID:28581500, PMID:29211708 NCBI chrNW_004955497:518,462...546,748 JBrowse link
G Pphln1 periphilin 1 ISO (PMID:28581500) UniProt PMID:28581500 NCBI chrNW_004955500:1,744,968...1,892,056
Ensembl chrNW_004955500:1,806,658...1,892,056
JBrowse link
G Resf1 retroelement silencing factor 1 ISO (MGI:MGI:6271895|PMID:29728365) UniProt PMID:29728365 MGI:MGI:6271895 NCBI chrNW_004955505:3,684,848...3,709,624 JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 ISO (PMID:24623306), (PMID:27732843)
(MGI:MGI:5440670|PMID:20164836), (MGI:MGI:6271895|PMID:29728365)
UniProt PMID:20164836, PMID:24623306, PMID:27732843, PMID:29728365 MGI:MGI:5440670, MGI:MGI:6271895 NCBI chrNW_004955588:290,497...338,438
Ensembl chrNW_004955588:290,168...338,426
JBrowse link
G Tasor transcription activation suppressor ISO (PMID:28581500), (PMID:29211708) UniProt PMID:28581500, PMID:29211708 NCBI chrNW_004955430:6,440,655...6,480,956
Ensembl chrNW_004955430:6,442,084...6,480,802
JBrowse link
G Trim28 tripartite motif containing 28 ISO (PMID:24623306)
(MGI:MGI:5440670|PMID:20164836)
UniProtKB
UniProt
PMID:20164836, PMID:24623306 MGI:MGI:5440670 NCBI chrNW_004955584:1,148,903...1,156,001 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11889
    metabolic process 7609
      positive regulation of metabolic process 3311
        positive regulation of macromolecule metabolic process 3071
          positive regulation of DNA methylation-dependent heterochromatin assembly 9
Path 2
Term Annotations click to browse term
  biological_process 11889
    metabolic process 7609
      cellular metabolic process 7027
        cellular aromatic compound metabolic process 3735
          nucleobase-containing compound metabolic process 3563
            nucleic acid metabolic process 3276
              RNA metabolic process 2901
                RNA biosynthetic process 2351
                  regulation of RNA biosynthetic process 2272
                    regulation of nucleic acid-templated transcription 2267
                      negative regulation of nucleic acid-templated transcription 1055
                        negative regulation of transcription, DNA-templated 1051
                          chromatin organization involved in negative regulation of transcription 58
                            heterochromatin assembly 40
                              regulation of heterochromatin assembly 17
                                regulation of DNA methylation-dependent heterochromatin assembly 12
                                  positive regulation of DNA methylation-dependent heterochromatin assembly 9
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.