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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of DNA methylation-dependent heterochromatin assembly
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Accession:GO:0090309 term browser browse the term
Definition:Any process that increases the rate, frequency, or extent of the repression of transcription by methylation of DNA, leading to the formation of heterochromatin.
Synonyms:broad_synonym: positive regulation of methylation-dependent chromatin silencing


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positive regulation of DNA methylation-dependent heterochromatin assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF7IP activating transcription factor 7 interacting protein IEA Ensembl GO_REF:0000107 NCBI chr27:32,082,615...32,194,954
Ensembl chr27:32,086,675...32,177,364
JBrowse link
G DNMT1 DNA methyltransferase 1 IEA Ensembl GO_REF:0000107 NCBI chr20:50,872,213...50,928,352
Ensembl chr20:50,879,527...50,928,029
JBrowse link
G MORC2 MORC family CW-type zinc finger 2 IEA Ensembl GO_REF:0000107 NCBI chr26:23,951,704...23,993,620
Ensembl chr26:23,953,130...23,992,431
JBrowse link
G MPHOSPH8 M-phase phosphoprotein 8 IEA Ensembl GO_REF:0000107 NCBI chr25:18,392,706...18,443,241
Ensembl chr25:18,392,409...18,443,241
JBrowse link
G PPHLN1 periphilin 1 IEA Ensembl GO_REF:0000107 NCBI chr27:11,445,893...11,590,168
Ensembl chr27:11,443,394...11,590,107
JBrowse link
G RESF1 retroelement silencing factor 1 ISO (MGI:MGI:6271895|PMID:29728365) UniProt PMID:29728365 MGI:MGI:6271895 NCBI chr27:16,829,611...16,856,960
Ensembl chr27:16,829,968...16,839,166
JBrowse link
G SETDB1 SET domain bifurcated histone lysine methyltransferase 1 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr17:60,035,819...60,069,721
Ensembl chr17:60,037,379...60,069,551
JBrowse link
G SETDB2 SET domain bifurcated histone lysine methyltransferase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:2,263,990...2,319,249
Ensembl chr22:2,244,507...2,319,158
JBrowse link
G TASOR transcription activation suppressor IEA Ensembl GO_REF:0000107 NCBI chr20:33,665,231...33,713,264
Ensembl chr20:33,646,000...33,712,936
JBrowse link
G TRIM28 tripartite motif containing 28 ISO (MGI:MGI:5440670|PMID:20164836)
(PMID:24623306)
UniProt
UniProtKB
PMID:20164836, PMID:24623306 MGI:MGI:5440670 NCBI chr 1:99,408,920...99,415,432
Ensembl chr 1:99,408,925...99,415,146
JBrowse link
G ZNF304 zinc finger protein 304 ISO (PMID:24623306) UniProtKB PMID:24623306 NCBI chr 1:100,739,792...100,748,656
Ensembl chr 1:100,740,374...100,768,032
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16187
    metabolic process 10657
      positive regulation of metabolic process 3816
        positive regulation of macromolecule metabolic process 3529
          positive regulation of DNA methylation-dependent heterochromatin assembly 11
Path 2
Term Annotations click to browse term
  biological_process 16187
    metabolic process 10657
      cellular metabolic process 9648
        cellular aromatic compound metabolic process 5119
          nucleobase-containing compound metabolic process 4916
            nucleic acid metabolic process 4467
              RNA metabolic process 4002
                RNA biosynthetic process 3149
                  regulation of RNA biosynthetic process 3032
                    regulation of nucleic acid-templated transcription 3028
                      negative regulation of nucleic acid-templated transcription 1289
                        negative regulation of transcription, DNA-templated 1263
                          chromatin organization involved in negative regulation of transcription 107
                            heterochromatin assembly 47
                              regulation of heterochromatin assembly 21
                                regulation of DNA methylation-dependent heterochromatin assembly 15
                                  positive regulation of DNA methylation-dependent heterochromatin assembly 11
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.