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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of DNA methylation-dependent heterochromatin assembly
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Accession:GO:0090309 term browser browse the term
Definition:Any process that increases the rate, frequency, or extent of the repression of transcription by methylation of DNA, leading to the formation of heterochromatin.
Synonyms:broad_synonym: positive regulation of methylation-dependent chromatin silencing


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positive regulation of DNA methylation-dependent heterochromatin assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF7IP activating transcription factor 7 interacting protein IMP (PMID:27732843) UniProt PMID:27732843 NCBI chr12:14,365,640...14,502,935
Ensembl chr12:14,365,632...14,502,935
JBrowse link
G DNMT1 DNA methyltransferase 1 IMP (PMID:24623306) UniProtKB PMID:24623306 NCBI chr19:10,133,346...10,194,953
Ensembl chr19:10,133,345...10,231,286
JBrowse link
G MORC2 MORC family CW-type zinc finger 2 IDA (PMID:28581500), (PMID:29211708) UniProt PMID:28581500, PMID:29211708 NCBI chr22:30,925,130...30,968,774
Ensembl chr22:30,925,130...30,968,774
JBrowse link
G MPHOSPH8 M-phase phosphoprotein 8 IDA (PMID:28581500), (PMID:29211708) UniProt PMID:28581500, PMID:29211708 NCBI chr13:19,633,648...19,673,441
Ensembl chr13:19,633,659...19,673,441
JBrowse link
G PPHLN1 periphilin 1 IDA (PMID:28581500) UniProt PMID:28581500 NCBI chr12:42,326,126...42,448,621
Ensembl chr12:42,238,447...42,459,715
JBrowse link
G RESF1 retroelement silencing factor 1 ISS UniProt GO_REF:0000024 NCBI chr12:31,959,415...31,993,107
Ensembl chr12:31,959,370...31,993,107
JBrowse link
G SETDB1 SET domain bifurcated histone lysine methyltransferase 1 IMP
IBA
ISS
(PMID:24623306), (PMID:27732843)
(PMID:21873635)
UniProt
GO_Central
PMID:21873635, PMID:24623306, PMID:27732843 GO_REF:0000024 NCBI chr 1:150,926,263...150,964,737
Ensembl chr 1:150,926,263...150,964,744
JBrowse link
G SETDB2 SET domain bifurcated histone lysine methyltransferase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:49,444,274...49,495,003
Ensembl chr13:49,444,374...49,495,003
JBrowse link
G TASOR transcription activation suppressor IDA (PMID:28581500), (PMID:29211708) UniProt PMID:28581500, PMID:29211708 NCBI chr 3:56,620,132...56,683,265
Ensembl chr 3:56,620,133...56,683,237
JBrowse link
G TRIM28 tripartite motif containing 28 IMP
ISS
(PMID:24623306) UniProtKB
UniProt
PMID:24623306 GO_REF:0000024 NCBI chr19:58,544,064...58,550,722
Ensembl chr19:58,544,064...58,550,722
JBrowse link
G ZNF304 zinc finger protein 304 IMP (PMID:24623306) UniProtKB PMID:24623306 NCBI chr19:57,351,253...57,359,898
Ensembl chr19:57,351,271...57,359,898
Ensembl chr19:57,351,271...57,359,898
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18670
    metabolic process 12302
      positive regulation of metabolic process 4209
        positive regulation of macromolecule metabolic process 3893
          positive regulation of DNA methylation-dependent heterochromatin assembly 11
Path 2
Term Annotations click to browse term
  biological_process 18670
    metabolic process 12302
      cellular metabolic process 11281
        cellular aromatic compound metabolic process 6234
          nucleobase-containing compound metabolic process 5982
            nucleic acid metabolic process 5435
              RNA metabolic process 4899
                RNA biosynthetic process 3901
                  regulation of RNA biosynthetic process 3713
                    regulation of nucleic acid-templated transcription 3708
                      negative regulation of nucleic acid-templated transcription 1493
                        negative regulation of transcription, DNA-templated 1452
                          chromatin organization involved in negative regulation of transcription 154
                            heterochromatin assembly 78
                              regulation of heterochromatin assembly 21
                                regulation of DNA methylation-dependent heterochromatin assembly 15
                                  positive regulation of DNA methylation-dependent heterochromatin assembly 11
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.