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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of DNA methylation-dependent heterochromatin assembly
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Accession:GO:0090309 term browser browse the term
Definition:Any process that increases the rate, frequency, or extent of the repression of transcription by methylation of DNA, leading to the formation of heterochromatin.
Synonyms:broad_synonym: positive regulation of methylation-dependent chromatin silencing


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positive regulation of DNA methylation-dependent heterochromatin assembly term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf7ip activating transcription factor 7 interacting protein ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 6:136,518,789...136,610,850
Ensembl chr 6:136,506,167...136,610,862
JBrowse link
G Dnmt1 DNA methyltransferase (cytosine-5) 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 9:20,907,206...20,959,888
Ensembl chr 9:20,907,209...20,959,888
JBrowse link
G Morc2a microrchidia 2A ISO
IMP
(MGI:MGI:6271895|PMID:29728365) MGI
UniProt
PMID:29728365 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6271895 NCBI chr11:3,649,189...3,690,477
Ensembl chr11:3,649,191...3,690,477
JBrowse link
G Mphosph8 M-phase phosphoprotein 8 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr14:56,668,235...56,697,430
Ensembl chr14:56,668,248...56,697,430
JBrowse link
G Pphln1 periphilin 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr15:93,398,345...93,491,913
Ensembl chr15:93,398,350...93,491,510
JBrowse link
G Resf1 retroelement silencing factor 1 IMP (MGI:MGI:6271895|PMID:29728365) UniProt PMID:29728365 MGI:MGI:6271895 NCBI chr 6:149,309,409...149,335,663
Ensembl chr 6:149,309,414...149,335,663
JBrowse link
G Setdb1 SET domain, bifurcated 1 ISO
IBA
IMP
(MGI:MGI:6201960|PMID:21873635)
(MGI:MGI:5440670|PMID:20164836), (MGI:MGI:6271895|PMID:29728365)
MGI
GO_Central
UniProt
PMID:20164836, PMID:21873635, PMID:29728365 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5440670, MGI:MGI:6201960, MGI:MGI:6271895 NCBI chr 3:95,323,525...95,357,202
Ensembl chr 3:95,323,525...95,357,202
JBrowse link
G Setdb2 SET domain, bifurcated 2 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr14:59,402,009...59,440,880
Ensembl chr14:59,402,009...59,440,884
JBrowse link
G Tasor transcription activation suppressor ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr14:27,423,674...27,483,555
Ensembl chr14:27,428,834...27,483,555
JBrowse link
G Trim28 tripartite motif-containing 28 ISO
IMP
(MGI:MGI:5440670|PMID:20164836) MGI
UniProt
PMID:20164836 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:5440670 NCBI chr 7:13,024,152...13,031,032
Ensembl chr 7:12,999,114...13,031,035
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23386
    metabolic process 11301
      positive regulation of metabolic process 3861
        positive regulation of macromolecule metabolic process 3561
          positive regulation of DNA methylation-dependent heterochromatin assembly 10
Path 2
Term Annotations click to browse term
  biological_process 23386
    metabolic process 11301
      cellular metabolic process 10089
        cellular aromatic compound metabolic process 5437
          nucleobase-containing compound metabolic process 5205
            nucleic acid metabolic process 4765
              RNA metabolic process 4271
                RNA biosynthetic process 3374
                  regulation of RNA biosynthetic process 3271
                    regulation of nucleic acid-templated transcription 3266
                      negative regulation of nucleic acid-templated transcription 1307
                        negative regulation of transcription, DNA-templated 1297
                          chromatin organization involved in negative regulation of transcription 132
                            heterochromatin assembly 48
                              regulation of heterochromatin assembly 20
                                regulation of DNA methylation-dependent heterochromatin assembly 14
                                  positive regulation of DNA methylation-dependent heterochromatin assembly 10
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.