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ONTOLOGY REPORT - ANNOTATIONS


Term:cerebrospinal fluid circulation
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Accession:GO:0090660 term browser browse the term
Definition:The neurological system process driven by motile cilia on ependymal cells of the brain by which cerebrospinal fluid circulates from the sites of secretion to the sites of absorption. In ventricular cavities, the flow is unidirectional and rostrocaudal, in subarachnoid spaces, the flow is multi-directional.
Synonyms:exact_synonym: CSF circulation;   CSF flow;   cerebrospinal fluid flow


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cerebrospinal fluid circulation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp4 aquaporin 4 ISS
ISO
GO_REF:0000024
(MGI:MGI:5435611|PMID:22896675)
UniProt
RGD
PMID:22896675 GO_REF:0000024, MGI:MGI:5435611 NCBI chr18:6,766,009...6,782,757
Ensembl chr18:6,765,945...6,782,996
JBrowse link
G Ccdc151 coiled-coil domain containing 151 ISO MGI:MGI:5548687 (MGI:MGI:6360364|PMID:31383820) RGD PMID:31383820 MGI:MGI:6360364 NCBI chr 8:23,000,912...23,014,707
Ensembl chr 8:23,000,872...23,014,499
JBrowse link
G Ccdc39 coiled-coil domain containing 39 ISO MGI:MGI:4364215|MGI:MGI:5056368|MGI:MGI:5316786 (MGI:MGI:5050793|PMID:21515572), (MGI:MGI:6111002|PMID:29317443), (MGI:MGI:6161988|PMID:28289722) RGD PMID:21515572, PMID:28289722, PMID:29317443 MGI:MGI:5050793, MGI:MGI:6111002, MGI:MGI:6161988 NCBI chr 2:120,278,605...120,367,829
Ensembl chr 2:120,278,605...120,316,600
JBrowse link
G Cfap43 cilia and flagella associated protein 43 ISO
IEA
MGI:MGI:6431400 (MGI:MGI:6402702|PMID:31884020)
GO_REF:0000107
RGD
Ensembl
PMID:31884020 GO_REF:0000107, MGI:MGI:6402702 NCBI chr 1:267,511,359...267,598,642
Ensembl chr 1:267,511,523...267,598,639
JBrowse link
G Daw1 dynein assembly factor with WD repeats 1 ISO MGI:MGI:5431501 (MGI:MGI:6161988|PMID:28289722) RGD PMID:28289722 MGI:MGI:6161988 NCBI chr 9:88,964,530...89,001,568
Ensembl chr 9:88,964,525...89,001,567
JBrowse link
G Jhy junctional cadherin complex regulator ISO
IEA
MGI:MGI:5437647 (MGI:MGI:5517715|PMID:23906841), (MGI:MGI:6103256|PMID:29211732)
GO_REF:0000107
RGD
Ensembl
PMID:23906841, PMID:29211732 GO_REF:0000107, MGI:MGI:5517715, MGI:MGI:6103256 NCBI chr 8:45,084,067...45,140,570
Ensembl chr 8:45,084,320...45,137,893
JBrowse link
G Katnip katanin interacting protein ISO MGI:MGI:4128978 (MGI:MGI:5882164|PMID:26714646) RGD PMID:26714646 MGI:MGI:5882164 NCBI chr 1:197,098,621...197,265,840
Ensembl chr 1:197,098,603...197,265,840
JBrowse link
G Lrrc6 leucine rich repeat containing 6 ISO MGI:MGI:6147714 (MGI:MGI:6147712|PMID:27353389) RGD PMID:27353389 MGI:MGI:6147712 NCBI chr 7:107,130,402...107,231,507
Ensembl chr 7:107,130,402...107,223,047
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 ISO (MGI:MGI:5913033|PMID:28392297), (MGI:MGI:6393053|PMID:25775275) RGD PMID:25775275, PMID:28392297 MGI:MGI:5913033, MGI:MGI:6393053 NCBI chr10:103,713,045...103,730,145
Ensembl chr10:103,713,045...103,730,145
JBrowse link
G Spag16 sperm associated antigen 16 ISO MGI:MGI:2662475 (MGI:MGI:6274126|PMID:17323374) RGD PMID:17323374 MGI:MGI:6274126 NCBI chr 9:77,027,626...77,833,476
Ensembl chr 9:77,320,726...77,833,281
JBrowse link
G Spag6l sperm associated antigen 6-like ISO MGI:MGI:2662475|MGI:MGI:3606977 (MGI:MGI:5691632|PMID:25393619), (MGI:MGI:6274126|PMID:17323374) RGD PMID:17323374, PMID:25393619 MGI:MGI:5691632, MGI:MGI:6274126 NCBI chr11:88,424,493...88,517,910
Ensembl chr11:88,424,414...88,508,601
JBrowse link
G Ttc25 tetratricopeptide repeat domain 25 ISO
IEA
(MGI:MGI:5913140|PMID:27486780)
GO_REF:0000107
RGD
Ensembl
PMID:27486780 GO_REF:0000107, MGI:MGI:5913140 NCBI chr10:88,459,490...88,488,237
Ensembl chr10:88,459,490...88,488,237
JBrowse link
G Ulk4 unc-51 like kinase 4 ISO MGI:MGI:4362969 (MGI:MGI:5790513|PMID:27445138) RGD PMID:27445138 MGI:MGI:5790513 NCBI chr 8:129,631,003...129,919,080
Ensembl chr 8:129,632,149...129,919,120
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    multicellular organismal process 9055
      system process 3445
        nervous system process 2692
          cerebrospinal fluid circulation 13
Path 2
Term Annotations click to browse term
  biological_process 20014
    cellular process 18788
      movement of cell or subcellular component 2186
        microtubule-based movement 402
          cilium movement 190
            epithelial cilium movement involved in extracellular fluid movement 39
              cerebrospinal fluid circulation 13
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.