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ONTOLOGY REPORT - ANNOTATIONS


Term:ciliary plasm
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Accession:GO:0097014 term browser browse the term
Definition:All of the contents of a cilium, excluding the plasma membrane surrounding the cilium.
Comment:Note that we deem cilium and microtubule-based flagellum to be equivalent. Also, researchers consider the composition of both the plasm and the membrane of the cilium to be detectably different from that in the non-ciliary cytosol and plasma membrane (e.g. in terms of calcium ion concentration, membrane lipid composition, and more). For this reason, the term "ciliary plasm" is not linked to "cytoplasm".
Synonyms:exact_synonym: cilium plasm
 narrow_synonym: microtubule-based flagellar matrix;   microtubule-based flagellum matrix
 related_synonym: cilial cytoplasm;   ciliary cytoplasm;   cilium cytoplasm;   microtubule-based flagellar cytoplasm;   microtubule-based flagellum cytoplasm


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ciliary plasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nek4 NIMA (never in mitosis gene a)-related expressed kinase 4 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr14:30,951,377...30,988,821
Ensembl chr14:30,951,377...30,988,821
JBrowse link
G Wdr34 WD repeat domain 34 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 2:30,031,551...30,048,879
Ensembl chr 2:30,031,546...30,048,881
JBrowse link
G Wdr60 WD repeat domain 60 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr12:116,206,261...116,263,046
Ensembl chr12:116,206,262...116,263,022
JBrowse link
axonemal basal plate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ift88 intraflagellar transport 88 IDA (MGI:MGI:5544506|PMID:24302887) MGI PMID:24302887 MGI:MGI:5544506 NCBI chr14:57,424,064...57,517,936
Ensembl chr14:57,424,062...57,517,936
JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector IDA
IBA
(MGI:MGI:5544506|PMID:24302887)
(MGI:MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:21873635, PMID:24302887 MGI:MGI:5544506, MGI:MGI:6201960 NCBI chr11:21,571,969...21,898,687
Ensembl chr11:21,572,235...21,898,989
JBrowse link
axonemal central apparatus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spag16 sperm associated antigen 16 IDA
IBA
IMP
(MGI:MGI:2389554|PMID:12391165)
(MGI:MGI:6201960|PMID:21873635)
(MGI:MGI:3766863|PMID:17699735)
MGI
GO_Central
PMID:12391165, PMID:17699735, PMID:21873635 MGI:MGI:2389554, MGI:MGI:3766863, MGI:MGI:6201960 NCBI chr 1:69,826,872...70,725,132
Ensembl chr 1:69,826,970...70,725,132
JBrowse link
G Spag17 sperm associated antigen 17 IDA
IBA
IMP
(MGI:MGI:3807761|PMID:15827353)
(MGI:MGI:6201960|PMID:21873635)
(MGI:MGI:5576118|PMID:23418344)
MGI
GO_Central
PMID:15827353, PMID:21873635, PMID:23418344 MGI:MGI:3807761, MGI:MGI:5576118, MGI:MGI:6201960 NCBI chr 3:99,885,417...100,143,322
Ensembl chr 3:99,885,406...100,143,322
JBrowse link
G Spag6l sperm associated antigen 6-like IGI (MGI:MGI:3766863|PMID:17699735) MGI PMID:17699735 MGI:MGI:3766863 NCBI chr16:16,753,016...16,829,363
Ensembl chr16:16,753,016...16,829,456
JBrowse link
axonemal central pair projection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfap69 cilia and flagella associated protein 69 ISO (MGI:MGI:6431182|PMID:30415212) MGI PMID:30415212 MGI:MGI:6431182 NCBI chr 5:5,579,278...5,664,232
Ensembl chr 5:5,579,278...5,664,239
JBrowse link
G Hydin HYDIN, axonemal central pair apparatus protein IMP (MGI:MGI:3793384|PMID:18250199) MGI PMID:18250199 MGI:MGI:3793384 NCBI chr 8:110,266,968...110,610,253
Ensembl chr 8:110,266,977...110,610,253
JBrowse link
axonemal dynein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casc1 cancer susceptibility candidate 1 IDA (MGI:MGI:6436377|PMID:30060180) UniProt PMID:30060180 MGI:MGI:6436377 NCBI chr 6:145,174,833...145,211,017
Ensembl chr 6:145,174,834...145,211,005
JBrowse link
G Ccdc65 coiled-coil domain containing 65 IEA UniProt GO_REF:0000002, MGI:MGI:2152098 NCBI chr15:98,708,194...98,723,340
Ensembl chr15:98,708,207...98,723,336
JBrowse link
G Dnah1 dynein, axonemal, heavy chain 1 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr14:31,260,375...31,325,891
Ensembl chr14:31,260,375...31,323,896
JBrowse link
G Dnah12 dynein, axonemal, heavy chain 12 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr14:26,691,554...26,892,719
Ensembl chr14:26,693,274...26,891,703
JBrowse link
G Dnah5 dynein, axonemal, heavy chain 5 IMP (MGI:MGI:2178772|PMID:11912187) MGI PMID:11912187 MGI:MGI:2178772 NCBI chr15:28,154,854...28,472,045
Ensembl chr15:28,203,752...28,472,052
JBrowse link
G Dnah7a dynein, axonemal, heavy chain 7A IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 1:53,396,995...53,707,301
Ensembl chr 1:53,397,006...53,706,784
JBrowse link
G Dnah7b dynein, axonemal, heavy chain 7B IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 1:46,066,071...46,373,551
Ensembl chr 1:46,066,315...46,373,550
JBrowse link
G Dnah7c dynein, axonemal, heavy chain 7C IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 1:46,425,428...46,807,477
Ensembl chr 1:46,425,592...46,807,476
JBrowse link
G Dnaic2 dynein, axonemal, intermediate chain 2 ISO MGI GO_REF:0000008, MGI:MGI:2154458 NCBI chr11:114,721,341...114,757,889
Ensembl chr11:114,727,408...114,757,889
JBrowse link
G Dnhd1 dynein heavy chain domain 1 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 7:105,650,776...105,721,800
Ensembl chr 7:105,650,827...105,721,799
JBrowse link
G Drc1 dynein regulatory complex subunit 1 IEA UniProt GO_REF:0000002, MGI:MGI:2152098 NCBI chr 5:30,281,335...30,366,695
Ensembl chr 5:30,281,388...30,366,695
JBrowse link
G Wdr63 WD repeat domain 63 IDA (MGI:MGI:6436377|PMID:30060180) UniProt PMID:30060180 MGI:MGI:6436377 NCBI chr 3:146,040,526...146,108,100
Ensembl chr 3:146,040,526...146,108,130
JBrowse link
G Wdr78 WD repeat domain 78 IMP
IBA
(MGI:MGI:6436377|PMID:30060180)
(MGI:MGI:6201960|PMID:21873635)
UniProt
GO_Central
PMID:21873635, PMID:30060180 MGI:MGI:6201960, MGI:MGI:6436377 NCBI chr 4:103,038,065...103,114,299
Ensembl chr 4:103,038,065...103,114,555
JBrowse link
axonemal microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arfgef2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 2:166,805,451...166,898,052
Ensembl chr 2:166,805,588...166,898,052
JBrowse link
G Cep162 centrosomal protein 162 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 9:87,189,573...87,255,536
Ensembl chr 9:87,189,577...87,255,536
JBrowse link
G Rpgrip1l Rpgrip1-like ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 8:91,217,030...91,313,291
Ensembl chr 8:91,217,030...91,313,262
JBrowse link
G Saxo1 stabilizer of axonemal microtubules 1 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 4:86,444,425...86,558,303
Ensembl chr 4:86,444,641...86,558,328
JBrowse link
G Saxo2 stabilizer of axonemal microtubules 2 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 7:82,632,960...82,648,561
Ensembl chr 7:82,632,960...82,648,528
JBrowse link
G Ttc30a1 tetratricopeptide repeat domain 30A1 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 2:75,979,106...75,981,967
Ensembl chr 2:75,978,247...75,981,967
JBrowse link
G Ttc30a2 tetratricopeptide repeat domain 30A2 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 2:75,976,172...75,978,179
Ensembl chr 2:75,975,740...75,978,170
JBrowse link
G Ttc30b tetratricopeptide repeat domain 30B IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 2:75,935,849...75,938,462
Ensembl chr 2:75,935,849...75,938,585
JBrowse link
axoneme term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak8 adenylate kinase 8 IDA (MGI:MGI:5646278|PMID:24740601) MGI PMID:24740601 MGI:MGI:5646278 NCBI chr 2:28,698,275...28,813,165
Ensembl chr 2:28,700,164...28,813,165
JBrowse link
G Akap14 A kinase (PRKA) anchor protein 14 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr  X:37,150,698...37,168,842
Ensembl chr  X:37,150,698...37,168,842
JBrowse link
G Ambra1 autophagy/beclin 1 regulator 1 IDA (MGI:MGI:5527012|PMID:24089209) UniProtKB PMID:24089209 MGI:MGI:5527012 NCBI chr 2:91,730,138...91,918,849
Ensembl chr 2:91,730,134...91,918,849
JBrowse link
G Arl13b ADP-ribosylation factor-like 13B IDA (MGI:MGI:4888042|PMID:21209331) CACAO PMID:21209331 MGI:MGI:4888042 NCBI chr16:62,793,308...62,847,055
Ensembl chr16:62,793,685...62,847,040
JBrowse link
G Arl3 ADP-ribosylation factor-like 3 IDA (MGI:MGI:5925653|PMID:26455799) UniProtKB PMID:26455799 MGI:MGI:5925653 NCBI chr19:46,531,109...46,573,182
Ensembl chr19:46,531,096...46,573,198
JBrowse link
G Arl6 ADP-ribosylation factor-like 6 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr16:59,612,949...59,639,409
Ensembl chr16:59,612,949...59,639,391
JBrowse link
G Armc4 armadillo repeat containing 4 ISO MGI GO_REF:0000008, MGI:MGI:2154458 NCBI chr18:7,088,233...7,298,273
Ensembl chr18:7,088,209...7,297,936
JBrowse link
G Atg14 autophagy related 14 IDA (MGI:MGI:5527012|PMID:24089209) UniProtKB PMID:24089209 MGI:MGI:5527012 NCBI chr14:47,540,893...47,568,434
Ensembl chr14:47,540,893...47,570,649
JBrowse link
G Atg16l1 autophagy related 16-like 1 (S. cerevisiae) IDA (MGI:MGI:5527012|PMID:24089209) UniProtKB PMID:24089209 MGI:MGI:5527012 NCBI chr 1:87,756,007...87,792,428
Ensembl chr 1:87,755,870...87,792,428
JBrowse link
G Atg5 autophagy related 5 IDA (MGI:MGI:5527012|PMID:24089209) UniProtKB PMID:24089209 MGI:MGI:5527012 NCBI chr10:44,268,322...44,364,299
Ensembl chr10:44,268,358...44,364,291
JBrowse link
G Atg7 autophagy related 7 IDA (MGI:MGI:5527012|PMID:24089209) UniProtKB PMID:24089209 MGI:MGI:5527012 NCBI chr 6:114,643,127...114,860,604
Ensembl chr 6:114,643,097...114,860,614
JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 (human) IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr19:4,886,878...4,906,653
Ensembl chr19:4,886,878...4,906,628
JBrowse link
G Bbs5 Bardet-Biedl syndrome 5 (human) IDA (MGI:MGI:5588761|PMID:24833722) MGI PMID:24833722 MGI:MGI:5588761 NCBI chr 2:69,646,848...69,667,571
Ensembl chr 2:69,647,171...69,667,571
JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 (human) IDA
IBA
(MGI:MGI:5492028|PMID:22302990)
(MGI:MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:21873635, PMID:22302990 MGI:MGI:5492028, MGI:MGI:6201960 NCBI chr 3:36,573,142...36,613,492
Ensembl chr 3:36,573,142...36,613,477
JBrowse link
G Ccdc113 coiled-coil domain containing 113 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 8:95,534,060...95,558,888
Ensembl chr 8:95,534,085...95,558,890
JBrowse link
G Ccdc114 coiled-coil domain containing 114 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 7:45,923,159...45,948,963
Ensembl chr 7:45,924,072...45,948,963
JBrowse link
G Ccdc151 coiled-coil domain containing 151 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 9:21,989,871...22,002,972
Ensembl chr 9:21,989,871...22,002,634
JBrowse link
G Ccdc39 coiled-coil domain containing 39 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000008, MGI:MGI:2154458, MGI:MGI:6201960 NCBI chr 3:33,810,757...33,844,325
Ensembl chr 3:33,812,362...33,844,310
JBrowse link
G Ccdc40 coiled-coil domain containing 40 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr11:119,228,490...119,265,248
Ensembl chr11:119,228,572...119,265,238
JBrowse link
G Ccdc63 coiled-coil domain containing 63 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 5:122,108,052...122,138,080
Ensembl chr 5:122,108,040...122,140,823
JBrowse link
G Ccdc65 coiled-coil domain containing 65 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr15:98,708,194...98,723,340
Ensembl chr15:98,708,207...98,723,336
JBrowse link
G Ccdc96 coiled-coil domain containing 96 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 5:36,484,588...36,488,171
Ensembl chr 5:36,484,588...36,488,172
JBrowse link
G Ccsap centriole, cilia and spindle associated protein ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 8:123,839,973...123,860,209
Ensembl chr 8:123,840,831...123,860,209
JBrowse link
G Cenpf centromere protein F IDA (MGI:MGI:5694347|PMID:25564561) MGI PMID:25564561 MGI:MGI:5694347 NCBI chr 1:189,640,606...189,688,107
Ensembl chr 1:189,640,606...189,688,086
JBrowse link
G Cfap36 cilia and flagella associated protein 36 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr11:29,218,918...29,247,317
Ensembl chr11:29,221,532...29,247,409
JBrowse link
G Cfap43 cilia and flagella associated protein 43 IDA
IBA
(MGI:MGI:6402702|PMID:31884020)
(MGI:MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:21873635, PMID:31884020 MGI:MGI:6201960, MGI:MGI:6402702 NCBI chr19:47,736,857...47,837,454
Ensembl chr19:47,736,857...47,919,287
JBrowse link
G Cfap70 cilia and flagella associated protein 70 IDA (MGI:MGI:6383288|PMID:30158508) UniProt PMID:30158508 MGI:MGI:6383288 NCBI chr14:20,394,190...20,452,264
Ensembl chr14:20,394,193...20,452,226
JBrowse link
G Cluap1 clusterin associated protein 1 colocalizes_with IDA (MGI:MGI:5488668|PMID:23351563) MGI PMID:23351563 MGI:MGI:5488668 NCBI chr16:3,907,194...3,942,299
Ensembl chr16:3,908,801...3,941,147
JBrowse link
G Ctsh cathepsin H ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 9:90,054,267...90,076,095
Ensembl chr 9:90,054,152...90,076,089
JBrowse link
G Cys1 cystin 1 IMP
IDA
(MGI:MGI:4461844|PMID:19850956)
(MGI:MGI:2158985|PMID:11854326), (MGI:MGI:4461844|PMID:19850956)
MGI PMID:11854326, PMID:19850956 MGI:MGI:2158985, MGI:MGI:4461844 NCBI chr12:24,665,833...24,681,886
Ensembl chr12:24,665,833...24,681,813
JBrowse link
G Dcdc2a doublecortin domain containing 2a ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr13:25,055,273...25,210,706
Ensembl chr13:25,056,004...25,210,706
JBrowse link
G Dcx doublecortin IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr  X:143,855,842...143,933,396
Ensembl chr  X:143,855,842...143,933,311
JBrowse link
G Dnaaf1 dynein, axonemal assembly factor 1 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 8:119,575,235...119,598,454
Ensembl chr 8:119,575,235...119,598,454
JBrowse link
G Dnah1 dynein, axonemal, heavy chain 1 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr14:31,260,375...31,325,891
Ensembl chr14:31,260,375...31,323,896
JBrowse link
G Dnah10 dynein, axonemal, heavy chain 10 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 5:124,725,085...124,834,308
Ensembl chr 5:124,725,085...124,834,308
JBrowse link
G Dnah11 dynein, axonemal, heavy chain 11 IDA
IBA
ISO
(MGI:MGI:6120222|PMID:26909801)
(MGI:MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:21873635, PMID:26909801 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6120222, MGI:MGI:6201960 NCBI chr12:117,877,982...118,199,043
Ensembl chr12:117,877,982...118,199,043
JBrowse link
G Dnah17 dynein, axonemal, heavy chain 17 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr11:118,021,723...118,130,719
Ensembl chr11:118,021,723...118,130,634
JBrowse link
G Dnah2 dynein, axonemal, heavy chain 2 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr11:69,420,807...69,549,108
Ensembl chr11:69,420,809...69,549,110
JBrowse link
G Dnah5 dynein, axonemal, heavy chain 5 ISO
IDA
(MGI:MGI:6284218|PMID:29916806)
(MGI:MGI:5551687|PMID:23849778), (MGI:MGI:5607335|PMID:25192045), (MGI:MGI:6284218|PMID:29916806)
MGI PMID:23849778, PMID:25192045, PMID:29916806 GO_REF:0000008, MGI:MGI:2154458, MGI:MGI:5551687, MGI:MGI:5607335, MGI:MGI:6284218 NCBI chr15:28,154,854...28,472,045
Ensembl chr15:28,203,752...28,472,052
JBrowse link
G Dnah8 dynein, axonemal, heavy chain 8 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr17:30,626,935...30,875,762
Ensembl chr17:30,624,354...30,877,365
JBrowse link
G Dnah9 dynein, axonemal, heavy chain 9 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000008, MGI:MGI:2154458, MGI:MGI:6201960 NCBI chr11:65,831,324...66,168,581
Ensembl chr11:65,831,282...66,168,551
JBrowse link
G Dnaic2 dynein, axonemal, intermediate chain 2 ISO
IDA
(MGI:MGI:6284218|PMID:29916806) MGI PMID:29916806 GO_REF:0000008, MGI:MGI:2154458, MGI:MGI:6284218 NCBI chr11:114,721,341...114,757,889
Ensembl chr11:114,727,408...114,757,889
JBrowse link
G Dnajb13 DnaJ heat shock protein family (Hsp40) member B13 IDA (MGI:MGI:3806784|PMID:18247331) MGI PMID:18247331 MGI:MGI:3806784 NCBI chr 7:100,503,011...100,514,815
Ensembl chr 7:100,501,716...100,514,960
JBrowse link
G Dnali1 dynein, axonemal, light intermediate polypeptide 1 ISO
IBA
IDA
(MGI:MGI:6201960|PMID:21873635)
(MGI:MGI:3628860|PMID:16496424), (MGI:MGI:6284218|PMID:29916806)
MGI
GO_Central
PMID:16496424, PMID:21873635, PMID:29916806 GO_REF:0000008, MGI:MGI:2154458, MGI:MGI:3628860, MGI:MGI:6201960, MGI:MGI:6284218 NCBI chr 4:125,055,339...125,065,657
Ensembl chr 4:125,055,338...125,065,703
JBrowse link
G Drc1 dynein regulatory complex subunit 1 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 5:30,281,335...30,366,695
Ensembl chr 5:30,281,388...30,366,695
JBrowse link
G Drc3 dynein regulatory complex subunit 3 ISO MGI GO_REF:0000008, MGI:MGI:2154458 NCBI chr11:60,352,881...60,394,342
Ensembl chr11:60,353,329...60,394,341
JBrowse link
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 IDA
IBA
(MGI:MGI:5009180|PMID:12802074)
(MGI:MGI:6201960|PMID:21873635)
BHF-UCL
GO_Central
PMID:12802074, PMID:21873635 MGI:MGI:5009180, MGI:MGI:6201960 NCBI chr 9:6,928,550...7,178,306
Ensembl chr 9:6,928,503...7,184,446
JBrowse link
G Dync2li1 dynein cytoplasmic 2 light intermediate chain 1 IDA
IBA
(MGI:MGI:5009180|PMID:12802074)
(MGI:MGI:6201960|PMID:21873635)
BHF-UCL
GO_Central
PMID:12802074, PMID:21873635 MGI:MGI:5009180, MGI:MGI:6201960 NCBI chr17:84,626,475...84,655,568
Ensembl chr17:84,626,496...84,655,588
JBrowse link
G Dzip1l DAZ interacting protein 1-like IDA (MGI:MGI:6149643|PMID:29487109) MGI PMID:29487109 MGI:MGI:6149643 NCBI chr 9:99,629,501...99,670,075
Ensembl chr 9:99,629,496...99,669,256
JBrowse link
G Efcab1 EF-hand calcium binding domain 1 ISO MGI GO_REF:0000008, MGI:MGI:2154458 NCBI chr16:14,906,224...14,969,061
Ensembl chr16:14,906,606...14,981,371
JBrowse link
G Efhc1 EF-hand domain (C-terminal) containing 1 IDA
IBA
(MGI:MGI:3529636|PMID:15670853)
(MGI:MGI:6201960|PMID:21873635)
UniProtKB
GO_Central
PMID:15670853, PMID:21873635 MGI:MGI:3529636, MGI:MGI:6201960 NCBI chr 1:20,951,553...20,990,841
Ensembl chr 1:20,951,626...20,990,841
JBrowse link
G Efhc2 EF-hand domain (C-terminal) containing 2 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr  X:17,132,049...17,320,049
Ensembl chr  X:17,132,049...17,319,368
JBrowse link
G Gabarap gamma-aminobutyric acid receptor associated protein IDA (MGI:MGI:5527012|PMID:24089209) UniProtKB PMID:24089209 MGI:MGI:5527012 NCBI chr11:69,991,370...69,994,949
Ensembl chr11:69,991,143...69,994,951
JBrowse link
G Gas8 growth arrest specific 8 ISO MGI GO_REF:0000008, MGI:MGI:2154458 NCBI chr 8:123,518,835...123,536,657
Ensembl chr 8:123,518,834...123,536,650
JBrowse link
G Gli1 GLI-Kruppel family member GLI1 IDA (MGI:MGI:3692156|PMID:16254602) CACAO PMID:16254602 MGI:MGI:3692156 NCBI chr10:127,329,882...127,341,579
Ensembl chr10:127,329,882...127,341,974
JBrowse link
G Gli2 GLI-Kruppel family member GLI2 IDA (MGI:MGI:4888042|PMID:21209331) CACAO PMID:21209331 MGI:MGI:4888042 NCBI chr 1:118,834,061...119,054,405
Ensembl chr 1:118,834,132...119,053,619
JBrowse link
G Gli3 GLI-Kruppel family member GLI3 IDA (MGI:MGI:4888042|PMID:21209331) CACAO PMID:21209331 MGI:MGI:4888042 NCBI chr13:15,463,723...15,730,026
Ensembl chr13:15,463,235...15,730,026
JBrowse link
G Gnat3 guanine nucleotide binding protein, alpha transducing 3 ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 5:17,962,570...18,019,668
Ensembl chr 5:17,962,549...18,019,834
JBrowse link
G Ift140 intraflagellar transport 140 IDA
IBA
(MGI:MGI:4460838|PMID:20368623), (MGI:MGI:5553228|PMID:23418020)
(MGI:MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:20368623, PMID:21873635, PMID:23418020 MGI:MGI:4460838, MGI:MGI:5553228, MGI:MGI:6201960 NCBI chr17:25,016,083...25,099,499
Ensembl chr17:25,016,085...25,099,495
JBrowse link
G Ift172 intraflagellar transport 172 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 5:31,253,279...31,291,391
Ensembl chr 5:31,253,277...31,291,116
JBrowse link
G Ift57 intraflagellar transport 57 IDA (MGI:MGI:4888042|PMID:21209331) CACAO PMID:21209331 MGI:MGI:4888042 NCBI chr16:49,699,294...49,765,126
Ensembl chr16:49,699,233...49,765,126
JBrowse link
G Ift88 intraflagellar transport 88 IDA (MGI:MGI:2158985|PMID:11854326), (MGI:MGI:2664063|PMID:11251073), (MGI:MGI:3773480|PMID:18066062), (MGI:MGI:4460838|PMID:20368623), (MGI:MGI:5544506|PMID:24302887) MGI PMID:11251073, PMID:11854326, PMID:18066062, PMID:20368623, PMID:24302887 MGI:MGI:2158985, MGI:MGI:2664063, MGI:MGI:3773480, MGI:MGI:4460838, MGI:MGI:5544506 NCBI chr14:57,424,064...57,517,936
Ensembl chr14:57,424,062...57,517,936
JBrowse link
G Inpp5e inositol polyphosphate-5-phosphatase E IDA
ISO
(MGI:MGI:4359555|PMID:19668215) UniProtKB
MGI
PMID:19668215 GO_REF:0000096, MGI:MGI:4359555, MGI:MGI:4834177 NCBI chr 2:26,396,249...26,409,244
Ensembl chr 2:26,396,249...26,409,203
JBrowse link
G Kif17 kinesin family member 17 IDA (MGI:MGI:4353477|PMID:19384852) MGI PMID:19384852 MGI:MGI:4353477 NCBI chr 4:138,262,251...138,301,973
Ensembl chr 4:138,250,435...138,301,967
JBrowse link
G Kif3a kinesin family member 3A ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr11:53,565,701...53,604,248
Ensembl chr11:53,567,379...53,601,967
JBrowse link
G Kifap3 kinesin-associated protein 3 IDA
IBA
(MGI:MGI:4353477|PMID:19384852)
(MGI:MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:19384852, PMID:21873635 MGI:MGI:4353477, MGI:MGI:6201960 NCBI chr 1:163,762,138...163,917,107
Ensembl chr 1:163,779,583...163,917,109
JBrowse link
G Lca5 Leber congenital amaurosis 5 (human) IDA
IBA
(MGI:MGI:5588761|PMID:24833722)
(MGI:MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:21873635, PMID:24833722 MGI:MGI:5588761, MGI:MGI:6201960 NCBI chr 9:83,391,355...83,442,994
Ensembl chr 9:83,390,293...83,441,127
JBrowse link
G Lca5l Leber congenital amaurosis 5-like IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr16:96,158,406...96,192,257
Ensembl chr16:96,158,407...96,192,271
JBrowse link
G Mak male germ cell-associated kinase IDA (MGI:MGI:5298333|PMID:21148103) MGI PMID:21148103 MGI:MGI:5298333 NCBI chr13:41,025,007...41,079,706
Ensembl chr13:41,025,008...41,079,706
JBrowse link
G Map1lc3b microtubule-associated protein 1 light chain 3 beta IDA (MGI:MGI:5527012|PMID:24089209) UniProtKB PMID:24089209 MGI:MGI:5527012 NCBI chr 8:121,590,438...121,598,760
Ensembl chr 8:121,590,361...121,598,760
JBrowse link
G Map4 microtubule-associated protein 4 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 9:109,929,841...110,083,954
Ensembl chr 9:109,931,460...110,083,955
JBrowse link
G Mapk15 mitogen-activated protein kinase 15 NOT ISO (PMID:29021280) UniProtKB PMID:29021280 NCBI chr15:75,993,732...75,999,153
Ensembl chr15:75,993,769...75,999,154
JBrowse link
G Mapt microtubule-associated protein tau IDA (MGI:MGI:3821640|PMID:19004860) MGI PMID:19004860 MGI:MGI:3821640 NCBI chr11:104,229,409...104,332,090
Ensembl chr11:104,231,390...104,332,090
JBrowse link
G Mns1 meiosis-specific nuclear structural protein 1 IDA (MGI:MGI:5318625|PMID:22396656) MGI PMID:22396656 MGI:MGI:5318625 NCBI chr 9:72,437,821...72,458,581
Ensembl chr 9:72,438,011...72,462,025
JBrowse link
G Pik3r4 phosphoinositide-3-kinase regulatory subunit 4 IDA (MGI:MGI:5527012|PMID:24089209) UniProtKB PMID:24089209 MGI:MGI:5527012 NCBI chr 9:105,642,995...105,687,655
Ensembl chr 9:105,642,978...105,687,657
JBrowse link
G Prkaca protein kinase, cAMP dependent, catalytic, alpha colocalizes_with ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 8:83,972,978...83,996,444
Ensembl chr 8:83,972,993...83,996,443
JBrowse link
G Prkar1a protein kinase, cAMP dependent regulatory, type I, alpha colocalizes_with ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr11:109,649,023...109,669,663
Ensembl chr11:109,649,405...109,669,656
JBrowse link
G Prkar2a protein kinase, cAMP dependent regulatory, type II alpha colocalizes_with ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 9:108,692,143...108,750,444
Ensembl chr 9:108,689,314...108,750,436
JBrowse link
G Rp1 retinitis pigmentosa 1 (human) IDA
IBA
(MGI:MGI:2676521|PMID:14507858), (MGI:MGI:4460838|PMID:20368623), (MGI:MGI:4461813|PMID:20592197), (MGI:MGI:5588761|PMID:24833722), (MGI:MGI:6194004|PMID:29899041)
(MGI:MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:14507858, PMID:20368623, PMID:20592197, PMID:21873635, PMID:24833722, PMID:29899041 MGI:MGI:2676521, MGI:MGI:4460838, MGI:MGI:4461813, MGI:MGI:5588761, MGI:MGI:6194004, MGI:MGI:6201960 NCBI chr 1:4,115,673...4,409,266
Ensembl chr 1:3,999,557...4,409,241
JBrowse link
G Rp1l1 retinitis pigmentosa 1 homolog like 1 IDA
IBA
(MGI:MGI:4353917|PMID:19657028)
(MGI:MGI:6201960|PMID:21873635)
UniProtKB
GO_Central
PMID:19657028, PMID:21873635 MGI:MGI:4353917, MGI:MGI:6201960 NCBI chr14:63,992,431...64,033,506
Ensembl chr14:63,992,506...64,035,025
JBrowse link
G Rpgrip1 retinitis pigmentosa GTPase regulator interacting protein 1 IDA (MGI:MGI:1933524|PMID:11104772) MGI PMID:11104772 MGI:MGI:1933524 NCBI chr14:52,104,241...52,161,339
Ensembl chr14:52,110,704...52,163,546
JBrowse link
G Rpgrip1l Rpgrip1-like ISO (MGI:MGI:3716248|PMID:17558409) MGI PMID:17558409 MGI:MGI:3716248 NCBI chr 8:91,217,030...91,313,291
Ensembl chr 8:91,217,030...91,313,262
JBrowse link
G Rsph4a radial spoke head 4 homolog A (Chlamydomonas) ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr10:33,905,111...33,916,021
Ensembl chr10:33,905,111...33,916,021
JBrowse link
G Rsph6a radial spoke head 6 homolog A (Chlamydomonas) IDA
IBA
(MGI:MGI:6279049|PMID:30239614)
(MGI:MGI:6201960|PMID:21873635)
UniProt
GO_Central
PMID:21873635, PMID:30239614 MGI:MGI:6201960, MGI:MGI:6279049 NCBI chr 7:19,054,678...19,074,447
Ensembl chr 7:19,054,690...19,074,447
JBrowse link
G Rsph9 radial spoke head 9 homolog (Chlamydomonas) IC
IDA
IBA
ISO
(MGI:MGI:4418602|PMID:19200523)
(MGI:MGI:6451324|PMID:30383886)
(MGI:MGI:6201960|PMID:21873635)
BHF-UCL
UniProt
GO_Central
MGI
PMID:19200523, PMID:21873635, PMID:30383886 GO_REF:0000096, MGI:MGI:4418602, MGI:MGI:4834177, MGI:MGI:6201960, MGI:MGI:6451324 NCBI chr17:46,122,038...46,144,242
Ensembl chr17:46,122,035...46,144,216
JBrowse link
G Septin2 septin 2 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 1:93,478,981...93,509,733
Ensembl chr 1:93,478,964...93,510,260
Ensembl chr 1:93,478,964...93,510,260
JBrowse link
G Septin7 septin 7 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 9:25,251,991...25,308,571
Ensembl chr 9:25,252,439...25,308,571
JBrowse link
G Septin9 septin 9 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr11:117,199,661...117,362,325
Ensembl chr11:117,199,661...117,362,325
JBrowse link
G Spag16 sperm associated antigen 16 IDA (MGI:MGI:3052627|PMID:15328412), (MGI:MGI:3619868|PMID:16382026), (MGI:MGI:3844768|PMID:19305393) MGI PMID:15328412, PMID:16382026, PMID:19305393 MGI:MGI:3052627, MGI:MGI:3619868, MGI:MGI:3844768 NCBI chr 1:69,826,872...70,725,132
Ensembl chr 1:69,826,970...70,725,132
JBrowse link
G Spata4 spermatogenesis associated 4 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 8:54,600,781...54,610,098
Ensembl chr 8:54,600,781...54,610,098
JBrowse link
G Spata7 spermatogenesis associated 7 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr12:98,628,129...98,669,819
Ensembl chr12:98,628,157...98,669,815
JBrowse link
G Spef1 sperm flagellar 1 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 2:131,170,261...131,174,810
Ensembl chr 2:131,170,261...131,187,282
JBrowse link
G Spef1l sperm flagellar 1 like IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 7:139,972,298...139,978,755
Ensembl chr 7:139,972,303...139,978,755
JBrowse link
G Sptbn5 spectrin beta, non-erythrocytic 5 ISO (MGI:MGI:5503249|PMID:23704327) MGI PMID:23704327 MGI:MGI:5503249 NCBI chr 2:120,041,493...120,088,913
Ensembl chr 2:120,041,493...120,085,678
JBrowse link
G Tctex1d2 Tctex1 domain containing 2 colocalizes_with ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr16:32,419,702...32,429,099
Ensembl chr16:32,419,702...32,429,099
JBrowse link
G Tctex1d4 Tctex1 domain containing 4 IDA (MGI:MGI:5510909|PMID:23789093) MGI PMID:23789093 MGI:MGI:5510909 NCBI chr 4:117,124,543...117,128,738
Ensembl chr 4:117,126,794...117,128,738
JBrowse link
G Tmem67 transmembrane protein 67 colocalizes_with ISO RGD GO_REF:0000096, MGI:MGI:4417868 NCBI chr 4:12,039,355...12,090,020
Ensembl chr 4:12,039,355...12,090,020
JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 IDA
IBA
(MGI:MGI:5298450|PMID:21945076)
(MGI:MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:21873635, PMID:21945076 MGI:MGI:5298450, MGI:MGI:6201960 NCBI chr 1:91,494,590...91,529,307
Ensembl chr 1:91,494,647...91,529,307
JBrowse link
G Ttc25 tetratricopeptide repeat domain 25 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr11:100,545,608...100,572,566
Ensembl chr11:100,545,607...100,572,568
JBrowse link
G Ttll10 tubulin tyrosine ligase-like family, member 10 IDA (MGI:MGI:3850271|PMID:19524510) UniProtKB PMID:19524510 MGI:MGI:3850271 NCBI chr 4:156,034,835...156,050,817
Ensembl chr 4:156,034,840...156,059,414
JBrowse link
G Ttll3 tubulin tyrosine ligase-like family, member 3 IDA (MGI:MGI:3850271|PMID:19524510) UniProtKB PMID:19524510 MGI:MGI:3850271 NCBI chr 6:113,389,260...113,414,592
Ensembl chr 6:113,389,260...113,414,587
JBrowse link
G Ttll8 tubulin tyrosine ligase-like family, member 8 IDA (MGI:MGI:3850271|PMID:19524510) UniProtKB PMID:19524510 MGI:MGI:3850271 NCBI chr15:88,889,778...88,955,051
Ensembl chr15:88,890,633...88,954,418
JBrowse link
G Tubb4a tubulin, beta 4A class IVA ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr17:57,080,061...57,087,600
Ensembl chr17:57,080,066...57,087,782
JBrowse link
G Tulp3 tubby-like protein 3 IDA (MGI:MGI:3841503|PMID:19286674) MGI PMID:19286674 MGI:MGI:3841503 NCBI chr 6:128,321,140...128,355,873
Ensembl chr 6:128,321,161...128,355,851
JBrowse link
G Wdr11 WD repeat domain 11 IDA (MGI:MGI:6116377|PMID:29263200) UniProt PMID:29263200 MGI:MGI:6116377 NCBI chr 7:129,591,694...129,635,738
Ensembl chr 7:129,591,863...129,635,738
JBrowse link
G Wdr34 WD repeat domain 34 IDA (MGI:MGI:5551675|PMID:24183451) UniProtKB PMID:24183451 MGI:MGI:5551675 NCBI chr 2:30,031,551...30,048,879
Ensembl chr 2:30,031,546...30,048,881
JBrowse link
G Wdr35 WD repeat domain 35 IDA
IBA
(MGI:MGI:4950635|PMID:21473986)
(MGI:MGI:6201960|PMID:21873635)
UniProtKB
GO_Central
PMID:21473986, PMID:21873635 MGI:MGI:4950635, MGI:MGI:6201960 NCBI chr12:8,973,998...9,028,848
Ensembl chr12:8,973,892...9,028,847
JBrowse link
G Wdr78 WD repeat domain 78 IDA (MGI:MGI:6436377|PMID:30060180) UniProt PMID:30060180 MGI:MGI:6436377 NCBI chr 4:103,038,065...103,114,299
Ensembl chr 4:103,038,065...103,114,555
JBrowse link
distal portion of axoneme term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnah9 dynein, axonemal, heavy chain 9 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr11:65,831,324...66,168,581
Ensembl chr11:65,831,282...66,168,551
JBrowse link
inner dynein arm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casc1 cancer susceptibility candidate 1 ISO MGI GO_REF:0000008, MGI:MGI:2154458 NCBI chr 6:145,174,833...145,211,017
Ensembl chr 6:145,174,834...145,211,005
JBrowse link
G Dnah1 dynein, axonemal, heavy chain 1 ISM
IBA
ISO
(MGI:MGI:1098361|PMID:9373155)
(MGI:MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:9373155, PMID:21873635 GO_REF:0000096, MGI:MGI:1098361, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr14:31,260,375...31,325,891
Ensembl chr14:31,260,375...31,323,896
JBrowse link
G Dnah10 dynein, axonemal, heavy chain 10 ISM (MGI:MGI:1098361|PMID:9373155) MGI PMID:9373155 MGI:MGI:1098361 NCBI chr 5:124,725,085...124,834,308
Ensembl chr 5:124,725,085...124,834,308
JBrowse link
G Dnah12 dynein, axonemal, heavy chain 12 ISM
IBA
(MGI:MGI:1098361|PMID:9373155)
(MGI:MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:9373155, PMID:21873635 MGI:MGI:1098361, MGI:MGI:6201960 NCBI chr14:26,691,554...26,892,719
Ensembl chr14:26,693,274...26,891,703
JBrowse link
G Dnah2 dynein, axonemal, heavy chain 2 ISM (MGI:MGI:1098361|PMID:9373155) MGI PMID:9373155 MGI:MGI:1098361 NCBI chr11:69,420,807...69,549,108
Ensembl chr11:69,420,809...69,549,110
JBrowse link
G Dnah3 dynein, axonemal, heavy chain 3 ISM (MGI:MGI:1098361|PMID:9373155) MGI PMID:9373155 MGI:MGI:1098361 NCBI chr 7:119,921,332...120,095,297
Ensembl chr 7:119,922,671...120,095,280
JBrowse link
G Dnah6 dynein, axonemal, heavy chain 6 ISM (MGI:MGI:1098361|PMID:9373155) MGI PMID:9373155 MGI:MGI:1098361 NCBI chr 6:73,017,603...73,222,227
Ensembl chr 6:73,017,606...73,221,651
JBrowse link
G Dnah7a dynein, axonemal, heavy chain 7A ISM
IBA
ISO
(MGI:MGI:1098361|PMID:9373155)
(MGI:MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:9373155, PMID:21873635 GO_REF:0000096, MGI:MGI:1098361, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 1:53,396,995...53,707,301
Ensembl chr 1:53,397,006...53,706,784
JBrowse link
G Dnah7b dynein, axonemal, heavy chain 7B ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 1:46,066,071...46,373,551
Ensembl chr 1:46,066,315...46,373,550
JBrowse link
G Dnah7c dynein, axonemal, heavy chain 7C ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 1:46,425,428...46,807,477
Ensembl chr 1:46,425,592...46,807,476
JBrowse link
G Dnhd1 dynein heavy chain domain 1 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 7:105,650,776...105,721,800
Ensembl chr 7:105,650,827...105,721,799
JBrowse link
G Wdr63 WD repeat domain 63 IBA (MGI:MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:MGI:6201960 NCBI chr 3:146,040,526...146,108,100
Ensembl chr 3:146,040,526...146,108,130
JBrowse link
outer dynein arm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc114 coiled-coil domain containing 114 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr 7:45,923,159...45,948,963
Ensembl chr 7:45,924,072...45,948,963
JBrowse link
G Cfap70 cilia and flagella associated protein 70 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr14:20,394,190...20,452,264
Ensembl chr14:20,394,193...20,452,226
JBrowse link
G Dnah17 dynein, axonemal, heavy chain 17 ISM
ISO
(MGI:MGI:1098361|PMID:9373155) MGI PMID:9373155 GO_REF:0000096, MGI:MGI:1098361, MGI:MGI:4834177 NCBI chr11:118,021,723...118,130,719
Ensembl chr11:118,021,723...118,130,634
JBrowse link
G Dnah5 dynein, axonemal, heavy chain 5 ISO
IDA
IBA
(MGI:MGI:6147712|PMID:27353389)
(MGI:MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:21873635, PMID:27353389 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6147712, MGI:MGI:6201960 NCBI chr15:28,154,854...28,472,045
Ensembl chr15:28,203,752...28,472,052
JBrowse link
G Dnah8 dynein, axonemal, heavy chain 8 ISM
IBA
(MGI:MGI:1098361|PMID:9373155)
(MGI:MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:9373155, PMID:21873635 MGI:MGI:1098361, MGI:MGI:6201960 NCBI chr17:30,626,935...30,875,762
Ensembl chr17:30,624,354...30,877,365
JBrowse link
G Dnah9 dynein, axonemal, heavy chain 9 IDA (MGI:MGI:6147712|PMID:27353389) MGI PMID:27353389 MGI:MGI:6147712 NCBI chr11:65,831,324...66,168,581
Ensembl chr11:65,831,282...66,168,551
JBrowse link
G Dnaic1 dynein, axonemal, intermediate chain 1 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr 4:41,569,647...41,638,158
Ensembl chr 4:41,569,775...41,638,158
JBrowse link
G Dnaic2 dynein, axonemal, intermediate chain 2 ISO
IBA
(MGI:MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6201960 NCBI chr11:114,721,341...114,757,889
Ensembl chr11:114,727,408...114,757,889
JBrowse link
G Dnal1 dynein, axonemal, light chain 1 ISA (MGI:MGI:3652454|PMID:15845866) MGI PMID:15845866 MGI:MGI:3652454 NCBI chr12:84,114,279...84,143,517
Ensembl chr12:84,114,366...84,147,498
JBrowse link
G Dync1i2 dynein cytoplasmic 1 intermediate chain 2 IDA (MGI:MGI:6147712|PMID:27353389) MGI PMID:27353389 MGI:MGI:6147712 NCBI chr 2:71,211,676...71,263,303
Ensembl chr 2:71,211,706...71,263,303
JBrowse link
G Nme8 NME/NM23 family member 8 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr13:19,645,078...19,697,826
Ensembl chr13:19,645,078...19,697,794
JBrowse link
outer dynein arm docking complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ttc25 tetratricopeptide repeat domain 25 ISO MGI GO_REF:0000096, MGI:MGI:4834177 NCBI chr11:100,545,608...100,572,566
Ensembl chr11:100,545,607...100,572,568
JBrowse link
proximal portion of axoneme term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnah11 dynein, axonemal, heavy chain 11 ISO
IDA
(MGI:MGI:6120222|PMID:26909801) MGI PMID:26909801 GO_REF:0000096, MGI:MGI:4834177, MGI:MGI:6120222 NCBI chr12:117,877,982...118,199,043
Ensembl chr12:117,877,982...118,199,043
JBrowse link
radial spoke head term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rsph4a radial spoke head 4 homolog A (Chlamydomonas) IMP (MGI:MGI:5882054|PMID:26506310) MGI PMID:26506310 MGI:MGI:5882054 NCBI chr10:33,905,111...33,916,021
Ensembl chr10:33,905,111...33,916,021
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 23186
    cellular anatomical entity 19111
      organelle 12868
        cilium 688
          ciliary plasm 135
            axoneme + 133
Path 2
Term Annotations click to browse term
  cellular_component 23186
    cellular anatomical entity 19111
      intracellular anatomical structure 14216
        cytoplasm 11279
          cytoplasmic region 236
            plasma membrane bounded cell projection cytoplasm 182
              ciliary plasm 135
                axoneme + 133
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.