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ONTOLOGY REPORT - ANNOTATIONS


Term:plasma membrane tubulation
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Accession:GO:0097320 term browser browse the term
Definition:A membrane tubulation process occurring in a plasma membrane.
Synonyms:broad_synonym: membrane tubulation
 related_synonym: vesicle scission


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plasma membrane tubulation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bin2 bridging integrator 2 ISO
IBA
ISS
(PMID:23285027)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:23285027, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 7:142,273,832...142,304,731
Ensembl chr 7:142,273,833...142,300,382
JBrowse link
G Bin3 bridging integrator 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:51,799,339...51,818,697
Ensembl chr15:51,779,839...51,818,699
JBrowse link
G Cavin2 caveolae associated protein 2 ISO
ISS
(PMID:19525939)
GO_REF:0000024
RGD
UniProt
PMID:19525939 GO_REF:0000024 NCBI chr 9:55,244,136...55,256,153
Ensembl chr 9:55,243,255...55,256,340
JBrowse link
G Ehd2 EH-domain containing 2 ISS
ISO
GO_REF:0000024
(MGI:5645194|PMID:24508342)
UniProt
RGD
PMID:24508342 GO_REF:0000024, MGI:5645194 NCBI chr 1:77,847,599...77,865,870
Ensembl chr 1:77,847,600...77,865,870
JBrowse link
G Fnbp1l formin binding protein 1-like ISO (PMID:20730103) RGD PMID:20730103 NCBI chr 2:226,691,435...226,742,081
Ensembl chr 2:226,688,844...226,779,440
JBrowse link
G Micall1 MICAL-like 1 ISO
ISS
(PMID:23596323)
GO_REF:0000024
RGD
UniProt
PMID:23596323 GO_REF:0000024 NCBI chr 7:120,343,900...120,375,151
Ensembl chr 7:120,345,180...120,375,156
JBrowse link
G Pacsin1 protein kinase C and casein kinase substrate in neurons 1 IMP
ISO
IEA
IBA
PMID:22355135
(MGI:4454229|PMID:20404169)
GO_REF:0000107
PMID:21873635
(PMID:19549836)
RGD
Ensembl
PMID:19549836, PMID:20404169, PMID:22355135, PMID:21873635 GO_REF:0000107, MGI:4454229, RGD:8554204, RGD:13792537 NCBI chr20:7,241,248...7,286,702
Ensembl chr20:7,279,820...7,286,586
JBrowse link
G Pacsin2 protein kinase C and casein kinase substrate in neurons 2 IEA
ISO
IBA
ISS
GO_REF:0000002
(MGI:4440389|PMID:20188097)
PMID:21873635
GO_REF:0000024
(PMID:23596323)
InterPro
RGD
UniProt
PMID:20188097, PMID:23596323, PMID:21873635 GO_REF:0000002, GO_REF:0000024, MGI:4440389, RGD:13792537 NCBI chr 7:124,224,210...124,317,407
Ensembl chr 7:124,223,633...124,317,379
JBrowse link
G Pacsin3 protein kinase C and casein kinase substrate in neurons 3 ISO
IBA
(PMID:23236520)
(MGI:5487500|PMID:22573331)
PMID:21873635
RGD PMID:22573331, PMID:23236520, PMID:21873635 MGI:5487500, RGD:13792537 NCBI chr 3:80,072,425...80,081,058
Ensembl chr 3:80,072,489...80,081,047
JBrowse link
G Sgip1 SH3GL interacting endocytic adaptor 1 ISO (MGI:4887327|PMID:17626015) RGD PMID:17626015 MGI:4887327 NCBI chr 5:122,300,415...122,498,478
Ensembl chr 5:122,390,522...122,491,203
JBrowse link
G Snx33 sorting nexin 33 ISO (PMID:20964629) RGD PMID:20964629 NCBI chr 8:61,584,656...61,596,055
Ensembl chr 8:61,584,656...61,595,032
JBrowse link
G Snx9 sorting nexin 9 ISO (PMID:18388313) RGD PMID:18388313 NCBI chr 1:46,780,142...46,826,250
Ensembl chr 1:46,779,860...46,825,830
JBrowse link
G Wasl WASP like actin nucleation promoting factor IDA PMID:20730103 BHF-UCL PMID:20730103 RGD:8554834 NCBI chr 4:51,677,722...51,726,212
Ensembl chr 4:51,677,722...51,726,212
JBrowse link
G Whamm WASP homolog associated with actin, golgi membranes and microtubules ISO (PMID:18614018) RGD PMID:18614018 NCBI chr 1:143,401,986...143,430,356
Ensembl chr 1:143,401,986...143,430,356
JBrowse link
negative regulation of membrane tubulation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnm2 dynamin 2 ISO (PMID:18388313) RGD PMID:18388313 NCBI chr 8:22,458,869...22,540,649
Ensembl chr 8:22,458,899...22,540,524
JBrowse link
G Wasl WASP like actin nucleation promoting factor IEA
ISO
GO_REF:0000107
(PMID:18388313)
Ensembl
RGD
PMID:18388313 GO_REF:0000107 NCBI chr 4:51,677,722...51,726,212
Ensembl chr 4:51,677,722...51,726,212
JBrowse link
positive regulation of membrane tubulation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asap1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(MGI:3617924|PMID:16431365)
Ensembl
RGD
PMID:16431365, PMID:21873635 GO_REF:0000107, MGI:3617924, RGD:13792537 NCBI chr 7:104,670,076...104,951,090
Ensembl chr 7:104,669,672...104,801,045
JBrowse link
G Plekhm2 pleckstrin homology and RUN domain containing M2 ISO
IBA
(PMID:18996344)
PMID:21873635
RGD PMID:18996344, PMID:21873635 RGD:13792537 NCBI chr 5:160,182,556...160,219,770
Ensembl chr 5:160,182,251...160,219,812
JBrowse link
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 IMP RGD PMID:24778241 RGD:13464356 NCBI chr 5:103,479,767...103,654,507
Ensembl chr 5:103,479,767...103,654,247
JBrowse link
G Sh3glb1 SH3 domain -containing GRB2-like endophilin B1 ISO (PMID:21068542) RGD PMID:21068542 NCBI chr 2:250,709,812...250,744,216
Ensembl chr 2:250,709,439...250,744,196
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    cellular process 18792
      cellular component organization or biogenesis 6789
        cellular component organization 6534
          membrane organization 865
            plasma membrane organization 126
              plasma membrane tubulation 19
                negative regulation of membrane tubulation 2
                positive regulation of membrane tubulation 4
                regulation of membrane tubulation + 6
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.