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ONTOLOGY REPORT - ANNOTATIONS


Term:telomeric repeat-containing RNA transcription
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Accession:GO:0097393 term browser browse the term
Definition:The synthesis of telomeric repeat-containing RNA from a DNA template. A telomere is a complex of DNA and proteins that seals the end of a chromosome.
Synonyms:exact_synonym: TERRA transcription


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negative regulation of telomeric RNA transcription from RNA pol II promoter term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX, chromatin remodeler IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:4881400|PMID:20211137)
Ensembl
UniProt
RGD
PMID:20211137 GO_REF:0000024, GO_REF:0000107, MGI:MGI:4881400 NCBI chr  X:76,820,110...76,979,155
Ensembl chr  X:76,692,970...76,708,878
Ensembl chr  X:76,692,970...76,708,878
JBrowse link
positive regulation of telomeric RNA transcription from RNA pol II promoter term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX, chromatin remodeler ISO
IEA
(PMID:26055325)
GO_REF:0000107
RGD
Ensembl
PMID:26055325 GO_REF:0000107 NCBI chr  X:76,820,110...76,979,155
Ensembl chr  X:76,692,970...76,708,878
Ensembl chr  X:76,692,970...76,708,878
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    metabolic process 12256
      organic substance metabolic process 11636
        macromolecule metabolic process 10081
          gene expression 6295
            transcription, DNA-templated 3419
              telomeric repeat-containing RNA transcription 1
                telomeric repeat-containing RNA transcription by RNA polymerase II + 1
Path 2
Term Annotations click to browse term
  biological_process 20014
    metabolic process 12256
      organic substance metabolic process 11636
        organic cyclic compound metabolic process 5931
          nucleobase-containing compound metabolic process 5483
            nucleic acid metabolic process 4980
              RNA metabolic process 4470
                RNA biosynthetic process 3478
                  nucleic acid-templated transcription 3464
                    transcription, DNA-templated 3419
                      telomeric repeat-containing RNA transcription 1
                        telomeric repeat-containing RNA transcription by RNA polymerase II + 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.