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ONTOLOGY REPORT - ANNOTATIONS


Term:ribbon synapse
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Accession:GO:0097470 term browser browse the term
Definition:Type of synapse characterized by an electron-dense ribbon, lamella (bar) or spherical body in the presynaptic process cytoplasm.
Synonyms:exact_synonym: synapsis fasciolaris
 xref: NIF_Subcellular:sao1884931180


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ribbon synapse term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 JBrowse link 12 39,553,903 39,603,326 RGD:1624291
G Bsn bassoon (presynaptic cytomatrix protein) JBrowse link 8 116,873,721 116,965,396 RGD:9850129
G Ctbp2 C-terminal binding protein 2 JBrowse link 1 205,001,354 205,030,565 RGD:1624291
G Kif3a kinesin family member 3a JBrowse link 10 38,918,705 38,953,958 RGD:11049590
G Nlgn2 neuroligin 2 JBrowse link 10 56,431,586 56,444,847 RGD:9831128
G Nphp4 nephrocystin 4 JBrowse link 5 169,647,581 169,744,662 RGD:1624291
G Pclo piccolo (presynaptic cytomatrix protein) JBrowse link 4 16,454,904 17,058,921 RGD:9850098
G Rapgef3 Rap guanine nucleotide exchange factor 3 JBrowse link 7 139,232,263 139,254,668 RGD:2314691
G Stx3 syntaxin 3 JBrowse link 1 228,137,781 228,195,004 RGD:1624291
G Unc13b unc-13 homolog B JBrowse link 5 58,505,449 58,714,396 RGD:1624291
cochlear hair cell ribbon synapse term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cacna1d calcium voltage-gated channel subunit alpha1 D JBrowse link 16 6,110,294 6,405,022 RGD:1600115
RGD:1624291
G Cdh23 cadherin-related 23 JBrowse link 20 29,857,018 30,263,758 RGD:1624291
G Myo6 myosin VI JBrowse link 8 87,583,649 87,731,271 RGD:1624291
photoreceptor ribbon synapse term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Amph amphiphysin JBrowse link 17 48,304,324 48,562,838 RGD:1624291
G Cacnb2 calcium voltage-gated channel auxiliary subunit beta 2 JBrowse link 17 81,673,862 82,019,219 RGD:1624291
RGD:1600115
G Cdh23 cadherin-related 23 JBrowse link 20 29,857,018 30,263,758 RGD:1624291
G Cltc clathrin heavy chain JBrowse link 10 74,014,560 74,070,578 RGD:1600115
RGD:1624291
G Cplx3 complexin 3 JBrowse link 8 62,379,502 62,386,264 RGD:1624291
G Ctbp2 C-terminal binding protein 2 JBrowse link 1 205,001,354 205,030,565 RGD:1624291
G Dnm1 dynamin 1 JBrowse link 3 11,338,081 11,382,043 RGD:1624291
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link 8 44,989,401 44,993,261 RGD:1624291
G Iqsec2 IQ motif and Sec7 domain ArfGEF 2 JBrowse link X 22,212,137 22,293,810 RGD:1624291
G Pacsin1 protein kinase C and casein kinase substrate in neurons 1 JBrowse link 20 7,241,248 7,286,702 RGD:1600115
RGD:1624291
G Rims2 regulating synaptic membrane exocytosis 2 JBrowse link 7 78,091,998 78,594,164 RGD:633897
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 JBrowse link 5 103,479,767 103,654,507 RGD:1624291

Term paths to the root
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Term Annotations click to browse term
  cellular_component 20119
    cellular anatomical entity 19775
      cell junction 2166
        synapse 1579
          ribbon synapse 23
            arciform density 0
            cochlear hair cell ribbon synapse 3
            photoreceptor ribbon synapse 12
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.