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ONTOLOGY REPORT - ANNOTATIONS


Term:ciliary transition fiber
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Accession:GO:0097539 term browser browse the term
Definition:A nine-bladed, propeller-like protein complex that links the distal end of the basal body and the cilium to the plasma membrane. Functions in protein sorting and gating (i.e. active and passive transport of proteins in and out of the cilium).
Comment:In mammals, ciliary transition fibers comprise at least five components (Ccdc41/Cep83, Cep89/Cep123, Sclt1, Fbf1, and Cep164) (PMID:24469809).
Synonyms:exact_synonym: cilial transition fiber;   cilial transition fibre;   ciliary transition fibre;   cilium transition fiber;   cilium transition fibre
 broad_synonym: transition fiber;   transition fibre
 related_synonym: centriolar distal appendage;   distal appendage of basal body;   distal appendage of centriole;   distal appendage of mother centriole


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ciliary transition fiber term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cenpf centromere protein F JBrowse link 13 108,132,499 108,178,609 RGD:1624291
G Cep164 centrosomal protein 164 JBrowse link 8 50,069,282 50,132,477 RGD:1624291
RGD:13792537
G Cep83 centrosomal protein 83 JBrowse link 7 35,739,553 35,847,618 RGD:1624291
G Cep89 centrosomal protein 89 JBrowse link 1 91,663,723 91,705,979 RGD:1624291
G Dzip1 DAZ interacting zinc finger protein 1 JBrowse link 15 104,117,551 104,168,574 RGD:1624291
G Fbf1 Fas binding factor 1 JBrowse link 10 104,692,791 104,718,630 RGD:1624291
G LOC100911256 ninein-like JBrowse link 6 91,207,750 91,273,661 RGD:13792537
G Nin ninein JBrowse link 6 92,423,412 92,527,776 RGD:1624291
RGD:13792537
G Odf2 outer dense fiber of sperm tails 2 JBrowse link 3 8,449,733 8,495,764 RGD:1624291
G Sclt1 sodium channel and clathrin linker 1 JBrowse link 2 128,523,376 128,675,668 RGD:1624291
G Tchp trichoplein, keratin filament binding JBrowse link 12 47,638,278 47,653,602 RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19843
    protein-containing complex 5779
      ciliary transition fiber 11
Path 2
Term Annotations click to browse term
  cellular_component 19843
    cellular anatomical entity 19457
      cell projection 2468
        plasma membrane bounded cell projection 2408
          cilium 645
            ciliary transition fiber 11
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.