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ONTOLOGY REPORT - ANNOTATIONS


Term:cytoplasmic side of endoplasmic reticulum membrane
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Accession:GO:0098554 term browser browse the term
Definition:The side (leaflet) of the plasma membrane that faces the cytoplasm.


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cytoplasmic side of endoplasmic reticulum membrane term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epm2a EPM2A glucan phosphatase, laforin ISO (MGI:MGI:6163653|PMID:15102711) RGD PMID:15102711 MGI:MGI:6163653 NCBI chr 1:5,448,958...5,571,512
Ensembl chr 1:5,448,958...5,571,512
JBrowse link
G Epm2aip1 EPM2A interacting protein 1 ISO (MGI:MGI:6163653|PMID:15102711) RGD PMID:15102711 MGI:MGI:6163653 NCBI chr 8:119,524,039...119,531,387
Ensembl chr 8:119,524,039...119,531,387
JBrowse link
G Ptpn1 protein tyrosine phosphatase, non-receptor type 1 ISO (PMID:1739967) RGD PMID:1739967 NCBI chr 3:164,665,462...164,711,936
Ensembl chr 3:164,665,532...164,711,848
JBrowse link
cytoplasmic side of rough endoplasmic reticulum membrane term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epm2a EPM2A glucan phosphatase, laforin ISO
ISS
(PMID:11001928)
GO_REF:0000024
RGD
UniProt
PMID:11001928 GO_REF:0000024 NCBI chr 1:5,448,958...5,571,512
Ensembl chr 1:5,448,958...5,571,512
JBrowse link
G Gnrh1 gonadotropin releasing hormone 1 IDA gonadotropin-releasing hormone-associated peptide RGD PMID:2183089 RGD:9685146 NCBI chr15:44,441,856...44,446,064
Ensembl chr15:44,442,555...44,442,875
Ensembl chr15:44,442,555...44,442,875
JBrowse link
G LOC100360508 ribosomal protein S26-like ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr13:45,079,857...45,080,277 JBrowse link
G Mgat2 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase ISO (PMID:24930395) RGD PMID:24930395 NCBI chr 6:91,476,698...91,479,187
Ensembl chr 6:91,476,698...91,479,183
JBrowse link
G Rpl10 ribosomal protein L10 ISO (PMID:24930395) RGD PMID:24930395 NCBI chr  X:156,438,251...156,440,461
Ensembl chr  X:156,438,251...156,440,461
JBrowse link
G Rpl11 ribosomal protein L11 ISO (PMID:24930395) RGD PMID:24930395 NCBI chr 5:154,390,809...154,394,412
Ensembl chr 5:154,388,140...154,394,328
JBrowse link
G Rpl22 ribosomal protein L22 ISO (PMID:24930395) RGD PMID:24930395 NCBI chr 5:169,506,150...169,512,875
Ensembl chr 5:169,506,138...169,512,871
JBrowse link
G Rpl23 ribosomal protein L23 ISO (PMID:24930395) RGD PMID:24930395 NCBI chr10:85,721,398...85,725,359
Ensembl chr10:85,721,394...85,725,429
JBrowse link
G Rpl27 ribosomal protein L27 ISS
ISO
GO_REF:0000024
(PMID:24930395)
UniProt
RGD
PMID:24930395 GO_REF:0000024 NCBI chr10:89,352,864...89,356,563
Ensembl chr10:89,352,835...89,356,547
JBrowse link
G Rpl29 ribosomal protein L29 ISO (PMID:24930395) RGD PMID:24930395 NCBI chr 8:115,131,228...115,133,401
Ensembl chr 8:115,131,367...115,133,401
JBrowse link
G Rpl31 ribosomal protein L31 ISO (PMID:24930395) RGD PMID:24930395 NCBI chr 9:46,086,959...46,090,444
Ensembl chr 9:46,086,984...46,090,997
JBrowse link
G Rpl32 ribosomal protein L32 ISO (PMID:24930395) RGD PMID:24930395 NCBI chr 4:147,715,480...147,719,044
Ensembl chr 6:145,777,318...145,777,767
Ensembl chr 4:145,777,318...145,777,767
JBrowse link
G Rpl35 ribosomal protein L35 ISO (PMID:24930395) RGD PMID:24930395 NCBI chr 3:23,294,813...23,297,774
Ensembl chr 3:23,294,814...23,297,774
JBrowse link
G Rps17 ribosomal protein S17 ISO (PMID:24930395) RGD PMID:24930395 NCBI chr 1:143,167,329...143,169,915
Ensembl chr 1:143,167,362...143,169,657
JBrowse link
G Rps18 ribosomal protein S18 ISO (PMID:24930395) RGD PMID:24930395 NCBI chr20:5,441,875...5,445,553
Ensembl chr20:5,441,876...5,445,553
JBrowse link
G Rps20 ribosomal protein S20 ISO (PMID:24930395) RGD PMID:24930395 NCBI chr 5:16,706,052...16,707,214
Ensembl chr 5:16,706,082...16,706,909
JBrowse link
G Rps21-ps1 ribosomal protein S21, pseudogene 1 ISO (PMID:24930395) RGD PMID:24930395 NCBI chr 5:159,606,647...159,606,990 JBrowse link
G Rps23 ribosomal protein S23 ISO (PMID:24930395) RGD PMID:24930395 NCBI chr 2:19,823,234...19,824,804
Ensembl chr 2:19,823,234...19,824,804
JBrowse link
G Rps26 ribosomal protein S26 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 7:3,052,112...3,053,662 JBrowse link
G Rps28 ribosomal protein S28 ISS
ISO
GO_REF:0000024
(PMID:24930395)
UniProt
RGD
PMID:24930395 GO_REF:0000024 NCBI chr 7:18,682,071...18,683,440
Ensembl chr 7:18,682,071...18,683,440
JBrowse link
G Rps29 ribosomal protein S29 ISO (PMID:24930395) RGD PMID:24930395 NCBI chr 6:91,455,333...91,456,709
Ensembl chr 6:91,455,333...91,456,696
Ensembl chr 3:91,455,333...91,456,696
Ensembl chr 7:91,455,333...91,456,696
JBrowse link
G Rps3 ribosomal protein S3 ISO (PMID:24930395) RGD PMID:24930395 NCBI chr 1:164,435,868...164,441,167
Ensembl chr 1:164,435,878...164,441,167
JBrowse link
G Rpsa ribosomal protein SA ISO (PMID:24930395) RGD PMID:24930395 NCBI chr 8:128,806,053...128,809,987
Ensembl chr 8:128,806,129...128,809,986
JBrowse link
integral component of cytoplasmic side of endoplasmic reticulum membrane term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hm13 histocompatibility minor 13 ISO
IBA
(PMID:15385547)
PMID:21873635
RGD PMID:15385547, PMID:21873635 RGD:13792537 NCBI chr 3:148,150,695...148,189,623
Ensembl chr 3:148,150,698...148,189,623
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel ISO (PMID:21044049) RGD PMID:21044049 NCBI chr14:6,602,004...6,645,257
Ensembl chr14:6,602,004...6,645,257
JBrowse link
G Sppl2a signal peptide peptidase-like 2A ISO
IBA
(PMID:15385547)
PMID:21873635
RGD PMID:15385547, PMID:21873635 RGD:13792537 NCBI chr 3:119,361,651...119,405,453
Ensembl chr 3:119,361,655...119,405,453
JBrowse link
G Sppl2b signal peptide peptidase-like 2B ISO
IBA
ISS
(PMID:15385547)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:15385547, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 7:11,712,187...11,724,915
Ensembl chr 7:11,712,188...11,724,843
JBrowse link
G Sppl2c signal peptide peptidase like 2C ISO
IBA
(PMID:15385547)
PMID:21873635
RGD PMID:15385547, PMID:21873635 RGD:13792537 NCBI chr10:92,245,434...92,248,758
Ensembl chr10:92,245,442...92,248,756
JBrowse link
G Sppl3 signal peptide peptidase like 3 ISO
IBA
(PMID:15385547)
PMID:21873635
RGD PMID:15385547, PMID:21873635 RGD:13792537 NCBI chr12:47,276,485...47,360,552
Ensembl chr12:47,276,476...47,360,507
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20609
    cellular anatomical entity 20358
      side of membrane 776
        cytoplasmic side of membrane 213
          cytoplasmic side of endoplasmic reticulum membrane 31
            cytoplasmic side of rough endoplasmic reticulum membrane 23
            cytoplasmic side of smooth endoplasmic reticulum membrane 0
            integral component of cytoplasmic side of endoplasmic reticulum membrane 6
Path 2
Term Annotations click to browse term
  cellular_component 20609
    cellular anatomical entity 20358
      intracellular anatomical structure 14706
        intracellular organelle 12912
          intracellular membrane-bounded organelle 10704
            endoplasmic reticulum 1747
              endoplasmic reticulum subcompartment 947
                endoplasmic reticulum membrane 936
                  cytoplasmic side of endoplasmic reticulum membrane 31
                    cytoplasmic side of rough endoplasmic reticulum membrane 23
                    cytoplasmic side of smooth endoplasmic reticulum membrane 0
                    integral component of cytoplasmic side of endoplasmic reticulum membrane 6
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.