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ONTOLOGY REPORT - ANNOTATIONS


Term:cytoplasmic side of rough endoplasmic reticulum membrane
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Accession:GO:0098556 term browser browse the term
Definition:The side (leaflet) of the rough endoplasmic reticulum membrane that faces the cytoplasm.


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cytoplasmic side of rough endoplasmic reticulum membrane term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPM2A EPM2A glucan phosphatase, laforin ISO (PMID:11001928) UniProtKB PMID:11001928 NCBI chr 6:143,179,097...143,525,223 JBrowse link
G GNRH1 gonadotropin releasing hormone 1 ISO gonadotropin-releasing hormone-associated peptide RGD PMID:2183089 RGD:9685146 NCBI chr 8:24,700,268...24,707,332
Ensembl chr 8:21,609,407...21,615,936
JBrowse link
G MGAT2 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr14:30,199,011...30,201,566 JBrowse link
G RPL10 ribosomal protein L10 ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr  X:143,839,739...143,844,026 JBrowse link
G RPL11 ribosomal protein L11 ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr 1:22,883,157...22,887,806
Ensembl chr 1:23,868,688...23,873,313
JBrowse link
G RPL22 ribosomal protein L22 ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr 1:4,952,104...4,966,761
Ensembl chr 1:6,207,507...6,219,947
JBrowse link
G RPL23 ribosomal protein L23 ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr17:18,417,964...18,421,708
Ensembl chr17:18,690,682...18,698,253
JBrowse link
G RPL27 ribosomal protein L27 ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr17:14,321,438...14,326,091
Ensembl chr17:14,548,809...14,553,728
JBrowse link
G RPL29 ribosomal protein L29 ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr 3:51,935,053...51,937,412 JBrowse link
G RPL31 ribosomal protein L31 ISO (PMID:24930395) UniProt PMID:24930395
G RPL32 ribosomal protein L32 ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr 3:12,759,205...12,764,800
Ensembl chr 3:13,103,471...13,109,044
JBrowse link
G RPL35 ribosomal protein L35 ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr 9:95,978,395...95,982,568
Ensembl chr 9:124,496,145...124,500,271
JBrowse link
G RPS17 ribosomal protein S17 ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr15:63,056,604...63,060,436 JBrowse link
G RPS18 ribosomal protein S18 ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr 6:32,844,234...32,848,748
Ensembl chr 6:33,958,471...33,962,941
JBrowse link
G RPS20 ribosomal protein S20 ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr 8:52,519,658...52,521,152
Ensembl chr 8:49,886,952...49,891,806
JBrowse link
G RPS21 ribosomal protein S21 ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr20:58,749,013...58,750,899 JBrowse link
G RPS23 ribosomal protein S23 ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr 5:33,005,488...33,007,881
Ensembl chr 5:33,323,233...33,326,569
JBrowse link
G RPS28 ribosomal protein S28 ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr19:7,607,197...7,608,113
Ensembl chr19:8,458,321...8,459,250
JBrowse link
G RPS29 ribosomal protein S29 ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr14:30,155,559...30,164,677 JBrowse link
G RPS3 ribosomal protein S3 ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr11:70,460,702...70,466,909
Ensembl chr11:73,762,794...73,768,982
JBrowse link
G RPSA ribosomal protein SA ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr 3:39,311,321...39,317,083
Ensembl chr 3:39,591,012...39,596,748
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 12626
    cellular anatomical entity 12523
      side of membrane 466
        cytoplasmic side of membrane 159
          cytoplasmic side of endoplasmic reticulum membrane 29
            cytoplasmic side of rough endoplasmic reticulum membrane 21
Path 2
Term Annotations click to browse term
  cellular_component 12626
    cellular anatomical entity 12523
      intracellular anatomical structure 10677
        intracellular organelle 9341
          intracellular membrane-bounded organelle 7975
            endoplasmic reticulum 1231
              endoplasmic reticulum subcompartment 447
                endoplasmic reticulum membrane 432
                  rough endoplasmic reticulum membrane 30
                    cytoplasmic side of rough endoplasmic reticulum membrane 21
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.