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ONTOLOGY REPORT - ANNOTATIONS


Term:basement membrane collagen trimer
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Accession:GO:0098651 term browser browse the term
Definition:Any collagen timer that is part of a basement membrane.


show annotations for term's descendants       view all columns           Sort by:
 
collagen type IV trimer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Col23a1 collagen type XXIII alpha 1 chain JBrowse link 10 34,846,618 34,934,991 RGD:13792537
G Col4a1 collagen type IV alpha 1 chain JBrowse link 16 83,522,162 83,632,153 RGD:1624291
RGD:13792537
G Col4a2 collagen type IV alpha 2 chain JBrowse link 16 83,386,388 83,522,169 RGD:1624291
RGD:13792537
G Col4a3 collagen type IV alpha 3 chain JBrowse link 9 88,357,528 88,484,735 RGD:1624291
RGD:13792537
G Col4a4 collagen type IV alpha 4 chain JBrowse link 9 88,314,763 88,357,183 RGD:1624291
RGD:13792537
G Col4a5 collagen type IV alpha 5 chain JBrowse link X 112,769,595 112,983,720 RGD:1624291
RGD:13792537
G Col4a6 collagen type IV alpha 6 chain JBrowse link X 112,405,647 112,768,337 RGD:1624291
RGD:13792537
G LOC100911572 collagen alpha-3(IV) chain-like JBrowse link 9 90,856,897 90,877,771 RGD:13792537
G LOC103693323 collagen alpha-1(XXIII) chain JBrowse link 10 36,741,139 37,031,200 RGD:13792537
collagen type XVIII trimer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Col18a1 collagen type XVIII alpha 1 chain JBrowse link 20 12,225,202 12,332,858 RGD:632362

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19949
    protein-containing complex 5829
      collagen trimer 72
        basement membrane collagen trimer 10
          collagen type IV trimer 9
          collagen type VIII trimer 0
          collagen type XIX trimer 0
          collagen type XV trimer 0
          collagen type XVIII trimer 1
Path 2
Term Annotations click to browse term
  cellular_component 19949
    cellular anatomical entity 19598
      extracellular region 2422
        extracellular matrix 391
          collagen-containing extracellular matrix 244
            basement membrane 111
              basement membrane collagen trimer 10
                collagen type IV trimer 9
                collagen type VIII trimer 0
                collagen type XIX trimer 0
                collagen type XV trimer 0
                collagen type XVIII trimer 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.